Gene: COL.COLO4_36264

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_36264
  • Transcript Identifier COL.rna34950
  • Gene Type Coding gene
  • Location AWUE01023076.1 : 12752-13929 : negative

Gene Family Information

  • ID HOM05D000095
  • #Genes/#Species 3348/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna34950
  • GenBank OMO54991.1
  • id gene36236
  • gene_name COLO4_36264
  • uniprot A0A1R3GAA4

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT1G70000
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G70000
GO:0031540
ISO
PLAZA Integrative Orthologyregulation of anthocyanin biosynthetic process AT1G70000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G70000
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT1G70000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)