Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 4.5e-91 338.2 209 100.0
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.6e-27 127.1 206 43.2
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 6.0e-27 125.2 207 40.6
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.1e-25 120.9 209 39.7
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 7.4e-25 118.2 213 36.2
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 2.1e-24 116.7 221 38.0
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 6.9e-23 111.7 212 38.7
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 9.0e-23 111.3 209 39.7
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.6e-22 109.8 213 38.5
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 3.4e-22 109.4 213 36.6
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 3.4e-22 109.4 213 38.5
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 7.6e-22 108.2 219 36.5
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 2.2e-21 106.7 218 35.3
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 2.2e-21 106.7 214 35.0
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.9e-21 106.3 207 39.6
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 4.9e-21 105.5 201 37.3
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.1e-20 104.4 102 58.8
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 1.4e-20 104.0 214 36.4
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.4e-20 104.0 210 36.2
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.4e-20 104.0 194 38.7
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.9e-20 103.6 210 35.7
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 2.5e-20 103.2 214 36.4
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 3.2e-20 102.8 196 37.2
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 5.5e-20 102.1 216 35.2
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 5.5e-20 102.1 201 37.8
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 7.1e-20 101.7 169 41.4
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 7.1e-20 101.7 212 37.3
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 9.3e-20 101.3 201 37.8
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.2e-19 100.9 214 34.1
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 1.2e-19 100.9 214 34.1
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 2.1e-19 100.1 214 35.5
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.1e-19 100.1 215 38.6
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.7e-19 99.8 212 37.7
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.7e-19 99.8 214 35.0
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 4.6e-19 99.0 162 40.1
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 4.6e-19 99.0 214 35.5
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 4.6e-19 99.0 216 37.0
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 6.0e-19 98.6 193 36.8
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 6.0e-19 98.6 212 36.8
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 7.9e-19 98.2 208 34.1
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 1.0e-18 97.8 98 53.1
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.8e-18 97.1 215 33.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 3.0e-18 96.3 219 35.2
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 6.7e-18 95.1 189 34.4
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 6.7e-18 95.1 98 52.0
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 8.7e-18 94.7 189 36.0
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.5e-17 94.0 208 33.7
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 1.5e-17 94.0 208 33.2
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 1.5e-17 94.0 208 33.7
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.5e-17 94.0 208 33.7
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 1.5e-17 94.0 163 40.5
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.5e-17 94.0 205 35.1
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.9e-17 93.6 193 37.8
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 2.5e-17 93.2 211 36.0
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 2.5e-17 93.2 194 36.6
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 2.5e-17 93.2 143 40.6
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 3.3e-17 92.8 141 44.0
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 3.3e-17 92.8 214 36.0
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 4.3e-17 92.4 225 31.1
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 9.6e-17 91.3 193 35.8
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 9.6e-17 91.3 211 37.4
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.3e-16 90.9 189 35.4
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.3e-16 90.9 141 39.7
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.6e-16 90.5 193 34.7
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.1e-16 90.1 134 45.5
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 2.8e-16 89.7 208 33.2
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 4.8e-16 89.0 219 34.7
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 6.2e-16 88.6 211 33.6
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 6.2e-16 88.6 193 35.2
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 8.2e-16 88.2 96 47.9
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.8e-15 87.0 192 35.9
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 1.8e-15 87.0 192 35.9
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.4e-15 86.7 96 46.9
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 2.4e-15 86.7 220 32.7
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 4.0e-15 85.9 127 43.3
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.0e-15 85.9 117 43.6
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 6.9e-15 85.1 192 34.4
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 6.9e-15 85.1 204 33.8
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 9.0e-15 84.7 191 33.5
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.5e-14 84.0 96 45.8
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.0e-14 83.6 245 32.7
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 2.6e-14 83.2 205 32.7
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.6e-14 83.2 91 49.5
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 4.5e-14 82.4 95 48.4
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 5.8e-14 82.0 134 41.8
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.0e-13 81.3 216 32.9
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.2e-13 80.1 192 34.4
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.2e-13 80.1 192 34.4
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.2e-13 80.1 192 34.4
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 7.1e-12 75.1 161 37.3
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 9.3e-12 74.7 131 37.4
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 9.3e-12 74.7 111 40.5
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.6e-11 73.9 133 38.3
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 3.5e-11 72.8 167 32.9
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 1.3e-10 70.9 129 38.8
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.3e-10 70.1 208 31.7
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 3.3e-09 66.2 217 28.6
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.8e-07 60.5 136 35.3
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 6.9e-07 58.5 130 32.3
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.6e-06 56.6 191 26.7
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.6e-06 56.6 97 39.2
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 4.5e-06 55.8 127 35.4
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 4.5e-06 55.8 81 40.7
Oeu009149.1 Olea europaea HOM05D001604 ORTHO05D001432 1.0e-05 54.7 119 33.6
SEGI_04365 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.0e-05 54.7 137 32.1


User provided reference genes

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