Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A809T49 Lonicera japonica HOM05D001366 ORTHO05D023354 3.2e-147 525.0 258 100.0
Hma1.2p1_0223F.1_g094185 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 6.0e-93 344.7 249 67.1
Dinv15253 Davidia involucrata HOM05D001366 ORTHO05D003220 1.7e-92 343.2 251 68.9
Rhsim12G0042000 Rhododendron simsii HOM05D001366 ORTHO05D003220 1.5e-91 340.1 250 68.0
Actinidia15071 Actinidia chinensis HOM05D001366 ORTHO05D003220 2.0e-88 329.7 249 65.1
GSVIVG01013806001 Vitis vinifera HOM05D001366 ORTHO05D003220 1.1e-86 323.9 248 63.7
vmacro01143 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 1.4e-86 323.6 251 64.9
TAR622G0036 Trochodendron aralioides HOM05D001366 ORTHO05D003220 5.6e-83 311.6 252 61.1
Rhsim12G0113000 Rhododendron simsii HOM05D001366 ORTHO05D003220 1.6e-82 310.1 261 60.2
Cfa009191 Carpinus fangiana HOM05D001366 ORTHO05D003220 2.1e-82 309.7 252 63.1
vmacro16213 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 3.6e-82 308.9 253 63.2
DCAR_031129 Daucus carota HOM05D001366 ORTHO05D003220 1.1e-81 307.4 249 63.5
Haze_12225 Corylus avellana HOM05D001366 ORTHO05D003220 3.4e-80 302.4 275 58.5
Oeu038612.1 Olea europaea HOM05D001366 ORTHO05D003220 3.4e-80 302.4 260 57.7
QL03p058693 Quercus lobata HOM05D001366 ORTHO05D003220 5.8e-80 301.6 259 59.1
Nitab4.5_0007943g0010 Nicotiana tabacum HOM05D001366 ORTHO05D003220 3.8e-79 298.9 249 60.2
Atru.chr11.2087 Acer truncatum HOM05D001366 ORTHO05D003220 4.9e-79 298.5 249 61.0
MD16G1097800 Malus domestica HOM05D001366 ORTHO05D003220 4.9e-79 298.5 250 60.4
CSS0021224 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D003220 2.4e-78 296.2 248 60.1
PSO063G5092 Papaver somniferum HOM05D001366 ORTHO05D003220 5.4e-78 295.0 245 59.2
Prupe.1G248900 Prunus persica HOM05D001366 ORTHO05D003220 1.6e-77 293.5 249 60.6
CiPaw.05G184800 Carya illinoinensis HOM05D001366 ORTHO05D003220 2.7e-77 292.7 253 60.1
MD13G1096800 Malus domestica HOM05D001366 ORTHO05D003220 2.7e-77 292.7 250 60.0
Cc11_g15490 Coffea canephora HOM05D001366 ORTHO05D003220 3.5e-77 292.4 248 59.7
PSO832G0819 Papaver somniferum HOM05D001366 ORTHO05D003220 1.3e-76 290.4 245 58.0
Ciclev10030499m.g Citrus clementina HOM05D001366 ORTHO05D003220 3.0e-76 289.3 255 58.8
MSTRG.577 Avicennia marina HOM05D001366 ORTHO05D003220 1.5e-75 287.0 249 57.8
CsaV3_5G031320 Cucumis sativus L. HOM05D001366 ORTHO05D003220 4.3e-75 285.4 253 57.3
SalBow2G1604 Salvia bowleyana HOM05D001366 ORTHO05D003220 4.3e-75 285.4 249 57.8
Migut.L01476 Erythranthe guttata HOM05D001366 ORTHO05D003220 5.6e-75 285.0 251 57.8
CANSAT01G0055 Cannabis sativa HOM05D001366 ORTHO05D003220 7.3e-75 284.6 248 60.5
Sopen05g001030 Solanum pennellii HOM05D001366 ORTHO05D003220 9.6e-75 284.3 248 58.9
SGA_v2.0_scaffold228G43260 Striga asiatica HOM05D001366 ORTHO05D003220 2.8e-74 282.7 249 57.8
Cpa.g.sc69.90 Carica papaya HOM05D001366 ORTHO05D003220 3.6e-74 282.3 252 57.1
Gohir.D01G150200 Gossypium hirsutum HOM05D001366 ORTHO05D003220 3.6e-74 282.3 253 55.3
Sed0024840 Sechium edule HOM05D001366 ORTHO05D003220 6.2e-74 281.6 253 56.9
Dinv24813 Davidia involucrata HOM05D001366 ORTHO05D003220 1.1e-73 280.8 183 73.8
Manes.13G026800 Manihot esculenta HOM05D001366 ORTHO05D003220 1.1e-73 280.8 252 56.3
MELO3C011972.2 Cucumis melo HOM05D001366 ORTHO05D003220 1.8e-73 280.0 253 56.5
Gorai.002G186200 Gossypium raimondii HOM05D001366 ORTHO05D003220 1.8e-73 280.0 254 55.1
TWI18G0188 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 3.1e-73 279.3 265 57.0
Lsat_1_v5_gn_4_4920 Lactuca sativa HOM05D001366 ORTHO05D003220 1.5e-72 276.9 257 54.9
PGR119G2090 Punica granatum HOM05D001366 ORTHO05D003220 2.0e-72 276.6 270 54.8
Ca_22500_v3 Cicer arietinum L. HOM05D001366 ORTHO05D003220 1.3e-71 273.9 246 56.1
Thecc.02G256300 Theobroma cacao HOM05D001366 ORTHO05D003220 1.3e-71 273.9 253 53.4
Eucgr.H02531 Eucalyptus grandis HOM05D001366 ORTHO05D003220 1.1e-70 270.8 245 56.7
TWI75G1447 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 1.4e-70 270.4 265 55.1
arahy.Tifrunner.gnm1.ann1.N2L19B Arachis hypogaea HOM05D001366 ORTHO05D003220 2.4e-70 269.6 248 55.2
MSTRG.7915 Avicennia marina HOM05D001366 ORTHO05D003220 3.2e-70 269.2 251 54.2
RcHm_v2.0_Chr4g0433251 Rosa chinensis HOM05D001366 ORTHO05D003220 3.2e-70 269.2 250 56.8
THA.LOC104823655 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 4.2e-70 268.9 258 55.0
Duzib268G0758 Durio zibethinus HOM05D001366 ORTHO05D003220 5.4e-70 268.5 255 53.3
arahy.Tifrunner.gnm1.ann1.52KDTF Arachis hypogaea HOM05D001366 ORTHO05D003220 1.2e-69 267.3 248 55.2
COL.COLO4_24234 Corchorus olitorius HOM05D001366 ORTHO05D003220 2.1e-69 266.5 250 52.0
Lj4g0012667 Lotus japonicus HOM05D001366 ORTHO05D003220 2.7e-69 266.2 243 55.6
ECA233G2601 Erigeron canadensis HOM05D001366 ORTHO05D003220 4.6e-69 265.4 248 56.9
Ah.02g130140 Amaranthus hybridus HOM05D001366 ORTHO05D003220 1.3e-68 263.8 246 56.9
TPR.G23137 Trifolium pratense HOM05D001366 ORTHO05D003220 3.0e-68 262.7 246 54.5
HanXRQChr12g0371851 Helianthus annuus HOM05D001366 ORTHO05D003220 5.1e-68 261.9 251 54.6
TAR374G1700 Trochodendron aralioides HOM05D001366 ORTHO05D003220 5.1e-68 261.9 249 55.4
Gohir.A01G159950 Gossypium hirsutum HOM05D001366 ORTHO05D003220 6.6e-68 261.5 265 52.5
FAN12G3618 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.9e-67 260.0 249 56.6
MBI16_g14597_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 1.9e-67 260.0 259 53.3
Potri.010G044100 Populus trichocarpa HOM05D001366 ORTHO05D003220 2.5e-67 259.6 241 55.2
Sed0006405 Sechium edule HOM05D001366 ORTHO05D003220 2.5e-67 259.6 245 53.9
ECA234G4650 Erigeron canadensis HOM05D001366 ORTHO05D003220 3.3e-67 259.2 247 55.5
Psat4g114240 Pisum sativum HOM05D001366 ORTHO05D003220 3.3e-67 259.2 246 53.3
Aa31LG1G4070 Aethionema arabicum HOM05D001366 ORTHO05D003220 5.6e-67 258.5 252 53.2
FAN12G2701 Fragaria x ananassa HOM05D001366 ORTHO05D003220 5.6e-67 258.5 249 56.2
Nn4g22680 Nelumbo nucifera HOM05D001366 ORTHO05D003220 2.1e-66 256.5 252 54.0
FvH4_4g25800 Fragaria vesca HOM05D001366 ORTHO05D003220 2.8e-66 256.1 245 56.3
Gohir.A01G159900 Gossypium hirsutum HOM05D001366 ORTHO05D003220 3.6e-66 255.8 253 53.0
Aqoxy3G02840 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 6.2e-66 255.0 247 53.0
Glyma.08G283700 Glycine max HOM05D001366 ORTHO05D003220 1.4e-65 253.8 244 54.1
Potri.008G188150 Populus trichocarpa HOM05D001366 ORTHO05D003220 2.4e-65 253.1 250 54.0
Glyma.18G142500 Glycine max HOM05D001366 ORTHO05D003220 6.9e-65 251.5 244 53.7
Gorai.008G160400 Gossypium raimondii HOM05D001366 ORTHO05D003220 1.2e-64 250.8 262 51.1
Phvul.003G062900 Phaseolus vulgaris HOM05D001366 ORTHO05D003220 2.0e-64 250.0 242 53.3
Sabra10G0023900 Salix brachista HOM05D001366 ORTHO05D003220 2.0e-64 250.0 243 53.1
Medtr8g069760 Medicago truncatula HOM05D001366 ORTHO05D003220 4.5e-64 248.8 247 54.3
Hund06013 Selenicereus undatus HOM05D001366 ORTHO05D003220 4.5e-64 248.8 249 53.0
ClCG05G025580 Citrullus lanatus HOM05D001366 ORTHO05D003220 5.8e-64 248.4 302 46.0
FAN07G2766 Fragaria x ananassa HOM05D001366 ORTHO05D003220 5.8e-64 248.4 259 52.9
AUR62014090 Chenopodium quinoa HOM05D001366 ORTHO05D003220 6.4e-63 245.0 251 53.0
PGSC0003DMG400007677 Solanum tuberosum HOM05D001366 ORTHO05D003220 6.4e-63 245.0 321 43.6
EL10Ac6g13726 Beta vulgaris HOM05D001366 ORTHO05D003220 1.1e-62 244.2 253 53.0
Lalb_Chr16g0392241 Lupinus albus HOM05D001366 ORTHO05D003220 1.9e-62 243.4 245 53.9
Sc04g0009380 Simmondsia chinensis HOM05D001366 ORTHO05D003220 2.4e-62 243.0 253 54.9
BraA08t35295Z Brassica rapa HOM05D001366 ORTHO05D003220 4.6e-61 238.8 244 51.6
A08p33790 Brassica napus HOM05D001366 ORTHO05D003220 2.3e-60 236.5 245 50.6
Sp1g09460 Schrenkiella parvula HOM05D001366 ORTHO05D003220 3.0e-60 236.1 252 49.6
DCAR_007067 Daucus carota HOM05D001366 ORTHO05D003220 3.9e-60 235.7 184 62.5
Lalb_Chr09g0334881 Lupinus albus HOM05D001366 ORTHO05D016210 3.9e-60 235.7 248 50.8
BcaC07g38627 Brassica carinata HOM05D001366 ORTHO05D003220 5.1e-60 235.3 245 50.2
C08p13950 Brassica napus HOM05D001366 ORTHO05D003220 5.1e-60 235.3 245 50.6
BcaC07g38588 Brassica carinata HOM05D001366 ORTHO05D003220 6.7e-60 235.0 245 50.6
BolC8t49029H Brassica oleracea HOM05D001366 ORTHO05D003220 6.7e-60 235.0 245 50.6
Thhalv10006565m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 8.7e-60 234.6 252 50.0
HanXRQChr12g0384161 Helianthus annuus HOM05D001366 ORTHO05D003220 8.7e-60 234.6 246 51.6
Lsat_1_v5_gn_8_153980 Lactuca sativa HOM05D001366 ORTHO05D003220 1.5e-59 233.8 234 53.4
HPP92_003084 Vanilla planifolia HOM05D001366 ORTHO05D003220 2.5e-59 233.0 254 48.0
FAN17G2901 Fragaria x ananassa HOM05D001366 ORTHO05D003220 3.3e-59 232.6 238 54.2
CARHR010980 Cardamine hirsuta HOM05D001366 ORTHO05D003220 7.4e-59 231.5 246 50.0
A09p64660 Brassica napus HOM05D001366 ORTHO05D003220 2.8e-58 229.6 248 50.0
AUR62005429 Chenopodium quinoa HOM05D001366 ORTHO05D003220 2.8e-58 229.6 182 62.6
Carub.0001s1031 Capsella rubella HOM05D001366 ORTHO05D003220 3.7e-58 229.2 244 50.4
FAN22G0388 Fragaria x ananassa HOM05D001366 ORTHO05D003220 3.1e-57 226.1 227 55.1
BraA09t41826Z Brassica rapa HOM05D001366 ORTHO05D003220 4.0e-57 225.7 248 49.2
C08p48530 Brassica napus HOM05D001366 ORTHO05D003220 1.5e-56 223.8 248 48.8
BolC8t52392H Brassica oleracea HOM05D001366 ORTHO05D003220 2.0e-56 223.4 248 48.8
BcaB08g37373 Brassica carinata HOM05D001366 ORTHO05D003220 3.4e-56 222.6 248 48.0
AL1G21690 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 3.8e-55 219.2 244 48.8
Sabra08G0142500 Salix brachista HOM05D001366 ORTHO05D003220 3.8e-55 219.2 275 49.8
AT1G10760 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 1.4e-54 217.2 245 48.6
CDE04G3560 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 1.4e-54 217.2 254 45.3
Ah.03g133220 Amaranthus hybridus HOM05D001366 ORTHO05D003220 1.9e-54 216.9 183 59.6
Nitab4.5_0002255g0040 Nicotiana tabacum HOM05D001366 ORTHO05D003220 1.9e-54 216.9 246 47.2
Peaxi162Scf00515g00133 Petunia axillaris HOM05D001366 ORTHO05D003220 4.6e-53 212.2 172 58.1
ATR1152G017 Amborella trichopoda HOM05D001366 ORTHO05D003220 4.3e-51 205.7 160 56.9
SEGI_00062 Sequoiadendron giganteum HOM05D001366 ORTHO05D016210 1.2e-48 197.6 204 47.1
SEGI_38712 Sequoiadendron giganteum HOM05D001366 ORTHO05D016210 2.6e-48 196.4 203 46.8
Zm00001eb278140 Zea mays HOM05D001366 ORTHO05D003220 1.0e-47 194.5 185 53.0
Os06g0498400 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D003220 3.8e-47 192.6 193 48.2
CDE06G0295 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 2.1e-45 186.8 157 56.7
unitig_26.g10358 Utricularia gibba HOM05D001366 ORTHO05D003220 3.0e-44 183.0 301 37.9
Mapoly0038s0029 Marchantia polymorpha HOM05D001366 ORTHO05D003220 1.7e-39 167.2 225 38.2
SEGI_32317 Sequoiadendron giganteum HOM05D001366 ORTHO05D016210 5.0e-39 165.6 164 46.3
SEGI_19712 Sequoiadendron giganteum HOM05D003220 ORTHO05D003944 3.3e-35 152.9 164 43.3
SMO347G0598 Selaginella moellendorffii HOM05D001366 ORTHO05D003220 6.3e-34 148.7 170 38.8
Pp3c8_6520 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.4e-33 147.5 183 38.3
Pp3c8_6536 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.4e-33 147.5 183 38.3
Pp3c3_11200 Physcomitrium patens HOM05D001366 ORTHO05D003220 5.9e-32 142.1 176 38.6
PSO675G6980 Papaver somniferum HOM05D001366 ORTHO05D003220 1.2e-29 134.4 157 38.9
Aqoxy6G00668_Aqoxy6G00669 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 1.0e-28 131.3 147 41.5
ATR0767G073 Amborella trichopoda HOM05D001366 ORTHO05D003220 1.4e-28 131.0 146 42.5
Nn5g29817 Nelumbo nucifera HOM05D001366 ORTHO05D003220 1.1e-27 127.9 147 39.5
CBR_g39013 Chara braunii HOM05D001366 ORTHO05D003220 3.3e-27 126.3 161 37.9
MBI16_g27903_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 5.7e-27 125.6 170 35.9
Hma1.2p1_0125F.1_g058690 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 7.4e-27 125.2 160 38.1
Dinv42591 Davidia involucrata HOM05D001366 ORTHO05D003220 4.1e-25 119.4 158 37.3
Rhsim07G0213400 Rhododendron simsii HOM05D001366 ORTHO05D003220 7.0e-25 118.6 166 34.3
COL.COLO4_35285 Corchorus olitorius HOM05D001366 ORTHO05D003220 1.2e-24 117.9 169 34.3
DCAR_029738 Daucus carota HOM05D001366 ORTHO05D003220 2.0e-24 117.1 155 39.4
AagrBONN_evm.TU.Sc2ySwM_344.4529 Anthoceros agrestis HOM05D001366 ORTHO05D003220 1.3e-23 114.4 153 39.9
Lj4A85G30 Lonicera japonica HOM05D001366 ORTHO05D016210 3.8e-23 112.8 145 36.6
Gohir.D05G221000 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.5e-22 110.9 156 34.0
Gorai.009G228100 Gossypium raimondii HOM05D001366 ORTHO05D003220 1.5e-22 110.9 156 34.0
Gohir.A05G216400 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.9e-22 110.5 156 34.0
Prupe.1G536100 Prunus persica HOM05D001366 ORTHO05D003220 7.2e-22 108.6 155 32.3
CDE04G2323 Ceratophyllum demersum HOM05D001366 ORTHO05D016210 9.4e-22 108.2 158 35.4
Ciclev10017434m.g Citrus clementina HOM05D001366 ORTHO05D003220 2.1e-21 107.1 155 32.9
QL09p018643 Quercus lobata HOM05D001366 ORTHO05D003220 2.1e-21 107.1 155 31.6
HanXRQChr10g0277751 Helianthus annuus HOM05D001366 ORTHO05D016210 1.0e-20 104.8 118 42.4
Lalb_Chr23g0269941 Lupinus albus HOM05D001366 ORTHO05D003220 2.3e-20 103.6 158 31.0
THA.LOC104799855 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 4.0e-20 102.8 156 32.1
Carub.0007s1662 Capsella rubella HOM05D001366 ORTHO05D003220 5.2e-20 102.4 157 31.2
Atru.chr13.974 Acer truncatum HOM05D001366 ORTHO05D003220 2.0e-19 100.5 169 31.4
AL7G28770 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 5.7e-19 99.0 162 30.2
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 5.7e-19 99.0 162 30.2
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 5.7e-19 99.0 164 31.1
MD08G1203800 Malus domestica HOM05D001366 ORTHO05D003220 5.7e-19 99.0 156 30.1
TAR628G1058 Trochodendron aralioides HOM05D001366 ORTHO05D003220 5.7e-19 99.0 107 39.3
CARHR231840 Cardamine hirsuta HOM05D001366 ORTHO05D003220 7.5e-19 98.6 162 30.2
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 9.7e-19 98.2 116 41.4
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 1.7e-18 97.4 164 30.5
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 1.7e-18 97.4 164 30.5
Sp7g22430 Schrenkiella parvula HOM05D001366 ORTHO05D003220 3.7e-18 96.3 162 30.2
Actinidia37408 Actinidia chinensis HOM05D001366 ORTHO05D023354 4.8e-18 95.9 98 56.1
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 8.2e-18 95.1 164 29.9
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 8.2e-18 95.1 109 41.3
Thhalv10024230m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 2.4e-17 93.6 162 29.6
AT4G24450 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 4.1e-17 92.8 162 29.0
MBI02_g34989_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D016210 5.3e-17 92.4 105 40.0
Manes.05G189000 Manihot esculenta HOM05D001366 ORTHO05D003220 7.7e-16 88.6 108 35.2
Aa31LG4G9550 Aethionema arabicum HOM05D001366 ORTHO05D003220 3.8e-15 86.3 156 30.8
Glyma.04G096500 Glycine max HOM05D001366 ORTHO05D003220 1.6e-13 80.9 116 34.5
vmacro04624 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 1.4e-12 77.8 163 27.6
Cre07.g319300 Chlamydomonas reinhardtii HOM05D001366 ORTHO05D003220 6.8e-12 75.5 157 33.8
VMungo1215G1269 Vigna mungo HOM05D000983 ORTHO05D006794 1.1e-09 68.2 117 33.3
Zm00001eb398390 Zea mays HOM05D001366 ORTHO05D442024 9.1e-09 65.1 61 47.5
Phvul.002G065700 Phaseolus vulgaris HOM05D000983 ORTHO05D006794 1.2e-08 64.7 123 32.5
Glyma.02G020500 Glycine max HOM05D000983 ORTHO05D006794 2.9e-07 60.1 102 34.3
MCO16G440 Micromonas commoda HOM05D001366 ORTHO05D003220 1.1e-06 58.2 90 37.8
Ah.07g200380 Amaranthus hybridus HOM05D005748 ORTHO05D007123 2.5e-06 57.0 86 45.3
ECA246G2169 Erigeron canadensis HOM05D000983 ORTHO05D006794 5.5e-06 55.8 105 32.4


User provided reference genes

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