Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 3.6e-135 485.3 330 100.0
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.6e-103 380.2 257 84.4
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 5.8e-101 371.7 256 84.4
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 9.3e-99 364.4 257 81.3
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 2.7e-98 362.8 224 86.2
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.3e-97 360.5 266 79.7
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 3.9e-97 359.0 256 81.6
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.5e-96 356.3 258 81.4
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 5.7e-96 355.1 255 82.0
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 7.4e-96 354.8 265 79.2
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 7.4e-96 354.8 224 81.7
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 2.4e-94 349.7 224 77.7
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 5.3e-94 348.6 224 82.1
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 6.9e-94 348.2 224 82.6
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 9.0e-94 347.8 224 77.2
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.2e-93 347.4 269 73.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.0e-93 346.7 224 83.5
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.0e-93 346.7 224 84.4
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 3.4e-93 345.9 224 83.0
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 5.8e-93 345.1 223 82.1
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.6e-93 344.7 237 78.1
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 7.6e-93 344.7 223 83.9
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.0e-92 344.4 216 77.8
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.3e-92 344.0 224 80.8
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.3e-92 344.0 216 83.8
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.7e-92 343.6 216 81.9
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.2e-92 343.2 218 83.0
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 2.2e-92 343.2 224 76.3
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 2.2e-92 343.2 256 78.5
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 2.9e-92 342.8 224 80.8
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 3.8e-92 342.4 216 84.3
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 5.0e-92 342.0 223 82.1
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 5.0e-92 342.0 229 79.5
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 8.4e-92 341.3 263 76.8
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.1e-91 340.9 224 75.9
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.1e-91 340.9 216 82.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 3.2e-91 339.3 223 82.5
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 4.2e-91 339.0 237 75.5
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.3e-91 337.8 224 81.2
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 2.1e-90 336.7 237 77.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 2.7e-90 336.3 224 79.0
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.6e-90 335.5 248 79.0
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 4.6e-90 335.5 224 80.4
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 7.9e-90 334.7 264 68.2
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.0e-89 334.3 227 78.0
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 2.3e-89 333.2 257 75.1
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.3e-89 333.2 259 76.8
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.3e-89 333.2 254 75.6
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.0e-89 332.8 231 76.6
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 5.1e-89 332.0 226 77.4
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 5.1e-89 332.0 229 77.3
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-88 330.9 263 74.9
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.1e-88 330.9 263 74.9
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.1e-88 330.9 224 79.9
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.9e-88 330.1 263 74.9
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.9e-88 330.1 263 74.9
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 4.3e-88 328.9 220 79.5
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.7e-88 328.6 210 82.9
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.8e-87 326.2 258 76.4
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.8e-87 326.2 216 79.2
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 6.3e-87 325.1 224 76.3
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 8.2e-87 324.7 254 71.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.1e-86 324.3 220 78.6
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.8e-86 323.6 263 68.8
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.1e-86 322.8 220 78.6
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 6.9e-86 321.6 229 75.5
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.9e-85 318.5 216 73.6
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.0e-84 317.8 216 77.8
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 8.5e-84 314.7 224 75.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 7.4e-80 301.6 242 65.3
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.7e-79 300.4 224 73.7
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.8e-78 297.0 208 79.3
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 9.1e-78 294.7 231 72.3
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.7e-76 290.4 224 71.9
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 8.5e-76 288.1 256 65.6
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 6.1e-74 282.0 218 70.2
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 3.9e-73 279.3 230 65.7
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.3e-71 274.2 202 70.3
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 4.2e-67 259.2 159 79.9
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.7e-63 246.1 192 71.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.3e-60 237.7 166 74.7
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 9.1e-54 214.9 220 57.7
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 5.9e-53 212.2 220 57.3
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 9.4e-51 204.9 136 77.9
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.2e-50 204.5 129 86.0
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 9.8e-48 194.9 134 81.3
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 3.1e-46 189.9 129 83.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 7.0e-46 188.7 125 84.0
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.2e-38 163.3 109 80.7
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.3e-36 157.9 116 80.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.9e-35 154.1 202 49.5
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 6.2e-34 149.1 206 37.9
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 1.2e-29 134.8 153 47.1
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.1e-25 121.7 74 91.9
CSS0036326 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.4e-08 63.2 114 32.5


User provided reference genes

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