Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.5e-144 515.4 252 100.0
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.1e-110 403.7 256 78.5
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.9e-107 392.9 252 77.4
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 2.1e-106 389.4 255 78.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 8.1e-103 377.5 252 75.4
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.4e-102 375.9 254 72.4
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 5.3e-102 374.8 256 71.9
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 4.2e-99 365.2 225 80.4
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.8e-94 349.7 259 68.3
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 7.6e-93 344.4 238 70.6
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.9e-88 329.7 218 72.5
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 9.6e-88 327.4 248 64.9
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 9.6e-88 327.4 215 72.6
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 1.6e-87 326.6 253 65.2
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 6.9e-86 321.2 211 73.0
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 9.0e-86 320.9 248 66.5
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.2e-85 320.5 239 66.1
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 2.0e-85 319.7 235 68.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 5.8e-85 318.2 228 68.4
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 5.8e-85 318.2 219 68.9
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 2.9e-84 315.8 234 66.2
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.8e-84 315.5 245 62.9
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 4.9e-84 315.1 219 69.9
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.4e-83 313.5 217 69.1
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.9e-83 313.2 211 70.6
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.9e-83 313.2 202 73.8
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.5e-83 312.8 211 69.7
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 3.2e-83 312.4 245 62.4
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 4.2e-83 312.0 217 68.7
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 4.2e-83 312.0 216 68.1
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 9.3e-83 310.8 245 62.9
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 9.3e-83 310.8 189 75.7
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.2e-82 310.5 194 76.8
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 2.7e-82 309.3 207 70.0
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 2.7e-82 309.3 207 71.5
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.7e-82 309.3 221 67.9
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.5e-82 308.9 247 62.3
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 4.6e-82 308.5 207 69.6
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 4.6e-82 308.5 248 63.3
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 1.3e-81 307.0 235 64.3
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 3.0e-81 305.8 252 61.5
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 5.1e-81 305.1 235 66.0
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 6.7e-81 304.7 207 71.0
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 8.7e-81 304.3 220 66.8
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.1e-80 303.9 210 69.0
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.3e-80 302.4 206 70.4
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 4.3e-80 302.0 203 70.0
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.3e-79 300.4 213 68.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.3e-79 300.4 216 67.1
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 6.3e-79 298.1 226 67.3
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.1e-78 297.4 247 61.1
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 1.8e-78 296.6 221 65.6
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 6.9e-78 294.7 242 60.7
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 6.9e-78 294.7 226 65.9
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.0e-77 293.1 206 68.0
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.0e-77 293.1 206 68.0
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 4.5e-77 292.0 203 68.5
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.9e-77 291.6 243 59.7
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.9e-75 286.6 209 64.6
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 4.2e-75 285.4 207 66.7
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 5.5e-75 285.0 212 66.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.7e-74 282.7 199 68.8
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.4e-73 280.4 217 65.0
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 3.7e-71 272.3 198 66.2
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 8.2e-71 271.2 197 68.0
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.4e-70 270.4 208 66.8
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 3.8e-68 262.3 189 66.1
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.2e-67 259.2 186 68.8
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 4.2e-67 258.8 208 63.5
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 3.3e-64 249.2 179 68.2
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.7e-63 246.9 210 55.2
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.4e-59 233.8 193 58.5
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 4.2e-59 232.3 152 70.4
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 6.1e-58 228.4 205 55.6
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 2.3e-57 226.5 200 56.5
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 5.2e-57 225.3 193 54.9
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 4.8e-55 218.8 195 55.9
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.4e-54 217.2 207 57.5
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.4e-54 216.5 259 48.6
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 4.1e-54 215.7 150 68.7
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 5.5e-51 205.3 149 65.1
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 5.5e-51 205.3 192 52.6
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 9.1e-46 188.0 246 45.5
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.7e-42 176.4 132 65.9
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 3.6e-42 176.0 96 79.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 6.6e-36 155.2 172 50.0
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 3.3e-35 152.9 121 63.6
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 6.8e-33 145.2 109 64.2
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.2e-29 134.4 85 72.9
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.0e-28 131.3 137 50.4
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 2.5e-27 126.7 82 69.5
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 8.0e-26 121.7 95 63.2
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 5.4e-22 109.0 198 35.9
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.4e-14 83.6 71 62.0
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.7e-10 69.3 119 34.5


User provided reference genes

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