Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.3e-180 636.3 330 100.0
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.4e-142 510.0 324 81.8
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 8.9e-142 507.3 324 80.6
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 2.6e-141 505.8 322 81.4
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 3.4e-141 505.4 323 82.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.0e-137 493.8 328 79.6
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.7e-137 493.0 326 80.1
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.1e-136 490.3 324 79.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 9.5e-136 487.3 325 77.5
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.3e-132 476.9 321 77.3
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 5.6e-128 461.5 321 74.1
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.6e-127 459.9 323 72.4
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 8.1e-127 457.6 321 73.5
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 8.1e-127 457.6 329 73.6
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.0e-125 453.0 320 73.1
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.3e-124 450.3 325 71.4
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.1e-123 447.2 321 72.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 3.2e-123 445.7 315 72.7
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.2e-122 443.7 321 72.6
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.1e-122 443.0 326 71.8
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.5e-122 442.2 321 71.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.0e-122 441.4 321 71.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-121 440.7 321 72.3
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-121 440.3 321 71.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 3.9e-121 438.7 325 73.8
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 5.1e-121 438.3 325 69.5
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.1e-120 437.2 326 67.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 2.5e-120 436.0 323 68.4
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.3e-119 433.7 321 70.1
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 2.8e-119 432.6 324 69.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 2.8e-119 432.6 325 70.5
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 4.8e-119 431.8 321 69.2
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 4.0e-118 428.7 325 69.2
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 3.4e-117 425.6 319 68.0
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 3.4e-117 425.6 321 68.5
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 5.8e-117 424.9 323 67.8
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 7.6e-117 424.5 324 65.7
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 7.6e-117 424.5 324 65.7
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 2.9e-116 422.5 323 67.8
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 5.4e-115 418.3 325 66.2
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 9.3e-115 417.5 327 65.7
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 9.3e-115 417.5 326 64.1
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.2e-114 417.2 320 68.8
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.2e-114 417.2 320 66.9
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.7e-114 416.0 327 65.4
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 4.6e-114 415.2 327 65.1
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 4.6e-114 415.2 326 63.8
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.0e-113 414.1 325 63.4
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.3e-113 413.7 325 65.2
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.7e-113 413.3 324 65.4
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.3e-113 412.9 322 65.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 6.6e-113 411.4 325 64.6
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 8.7e-113 411.0 323 64.7
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 7.3e-112 407.9 321 66.0
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.3e-111 407.1 320 64.1
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.6e-111 406.8 323 64.1
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 4.8e-111 405.2 325 64.6
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.1e-110 404.1 318 67.0
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.1e-110 404.1 307 69.1
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.4e-110 402.9 320 67.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.0e-110 402.1 324 62.0
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.0e-110 402.1 324 62.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 5.3e-110 401.7 325 63.4
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.6e-109 399.4 318 65.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 5.8e-109 398.3 324 64.8
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.2e-108 396.4 326 63.2
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.9e-107 393.3 324 63.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.7e-106 389.4 287 69.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.7e-106 389.4 319 62.7
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 7.9e-106 387.9 326 61.3
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.3e-105 387.1 308 64.6
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.8e-105 386.7 305 65.6
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 3.9e-105 385.6 321 63.2
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.6e-103 380.2 324 61.1
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 3.7e-103 379.0 324 61.1
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.1e-102 375.9 270 69.3
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.2e-101 374.0 322 59.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 5.8e-101 371.7 318 60.4
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.7e-100 370.2 318 60.7
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.7e-100 370.2 324 58.6
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 3.2e-99 365.9 322 61.5
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.3e-97 359.8 321 58.6
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.9e-96 356.7 266 69.2
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 3.3e-96 355.9 327 59.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 9.6e-96 354.4 286 69.9
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 4.8e-95 352.1 329 56.8
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.7e-92 343.6 238 72.7
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 6.7e-89 331.6 329 55.6
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 8.2e-87 324.7 267 61.8
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.4e-83 313.9 333 55.3
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.5e-80 303.9 331 51.4
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 8.5e-76 288.1 323 49.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 9.4e-75 284.6 318 48.7
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 3.9e-73 279.3 338 48.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 5.1e-73 278.9 335 49.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.4e-65 254.2 317 45.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.4e-64 249.2 203 63.5
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 4.4e-64 249.2 187 70.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.7e-63 247.3 228 61.0
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.8e-63 246.5 329 45.9
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 3.5e-61 239.6 189 63.5
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 5.5e-59 232.3 162 73.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.6e-53 214.2 205 56.1
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.6e-48 196.8 258 45.3
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.0e-36 158.3 109 70.6
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.3e-36 157.9 109 70.6
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-27 128.3 86 72.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.8e-25 120.9 269 29.0
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 7.1e-22 109.0 113 53.1
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 4.7e-18 96.3 120 45.0
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 5.4e-14 82.8 68 66.2
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 8.4e-07 58.9 50 64.0


User provided reference genes

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