Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 5.8e-231 803.9 415 100.0
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.6e-167 593.2 428 75.9
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.0e-163 580.5 426 73.7
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.3e-163 579.3 417 74.3
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 7.0e-160 567.8 433 71.1
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 4.7e-156 555.1 418 71.1
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 6.8e-155 551.2 398 73.9
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.0e-154 549.7 409 71.4
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 7.5e-154 547.7 407 72.5
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 9.8e-154 547.4 421 71.3
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.1e-149 533.9 427 70.0
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 2.1e-148 529.6 427 69.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 7.5e-138 494.6 368 69.0
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 5.9e-135 485.0 390 66.4
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 3.6e-132 475.7 369 68.3
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 5.2e-131 471.9 396 64.6
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.6e-130 469.5 368 67.7
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.4e-130 468.8 346 69.4
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.5e-130 468.0 368 67.4
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 3.7e-129 465.7 342 71.1
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 8.3e-129 464.5 369 65.0
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.9e-128 463.4 370 65.7
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 4.1e-128 462.2 368 67.1
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 5.4e-128 461.8 342 69.3
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 2.7e-127 459.5 382 64.1
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 6.0e-127 458.4 342 69.6
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 7.8e-127 458.0 362 65.5
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.0e-126 457.6 365 65.8
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.3e-126 457.2 423 60.3
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.3e-126 457.2 433 59.4
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.7e-126 456.8 368 63.3
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 5.0e-126 455.3 342 69.6
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.1e-125 454.1 394 61.9
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 5.6e-125 451.8 345 66.1
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 7.3e-125 451.4 374 63.6
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 9.5e-125 451.1 342 68.1
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 1.6e-124 450.3 379 63.3
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.6e-124 450.3 361 65.9
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 2.1e-124 449.9 343 68.5
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 3.6e-124 449.1 373 63.5
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 4.7e-124 448.7 344 66.0
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 1.1e-123 447.6 345 65.5
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.3e-123 446.4 344 66.0
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 2.3e-123 446.4 365 63.3
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 5.2e-123 445.3 423 57.2
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 6.8e-123 444.9 344 64.8
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 8.9e-123 444.5 344 68.6
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.5e-122 443.7 397 59.4
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 2.6e-122 443.0 344 65.7
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.6e-122 443.0 344 65.7
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 3.4e-122 442.6 409 58.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 4.4e-122 442.2 370 63.5
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 4.4e-122 442.2 345 64.6
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 5.8e-122 441.8 344 65.4
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 5.8e-122 441.8 361 61.8
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 2.9e-121 439.5 345 64.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.9e-121 439.5 371 60.6
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 4.9e-121 438.7 374 63.4
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 8.3e-121 438.0 374 63.1
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 8.3e-121 438.0 363 63.1
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 5.4e-120 435.3 338 64.8
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.4e-120 435.3 329 67.8
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 9.2e-120 434.5 374 62.6
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 2.1e-119 433.3 399 59.1
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 2.1e-119 433.3 409 57.2
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 2.7e-119 433.0 342 64.3
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.5e-119 432.6 354 63.8
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 3.5e-119 432.6 371 60.1
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.5e-119 432.6 376 60.6
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 6.0e-119 431.8 371 59.8
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 6.0e-119 431.8 373 61.7
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 7.8e-119 431.4 428 55.6
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 3.9e-118 429.1 308 71.1
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 4.3e-117 425.6 366 59.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 4.3e-117 425.6 523 49.3
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.6e-117 425.2 409 56.0
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.7e-116 422.2 338 62.4
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 6.2e-116 421.8 360 64.4
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 8.1e-116 421.4 421 55.3
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 1.5e-114 417.2 333 65.5
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 2.0e-114 416.8 425 55.1
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.8e-114 415.2 339 65.8
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.6e-114 414.8 342 65.2
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.7e-113 413.7 373 61.9
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.7e-113 413.7 376 59.3
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.4e-112 410.6 369 61.5
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.2e-112 409.5 364 59.3
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 7.1e-112 408.3 363 58.4
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 2.7e-111 406.4 421 55.3
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 8.6e-110 401.4 259 80.3
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.1e-108 396.7 334 60.5
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 9.9e-106 387.9 372 57.3
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 5.8e-98 362.1 292 64.4
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.2e-95 354.4 241 75.1
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 8.4e-89 331.6 370 52.4
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 4.6e-87 325.9 388 51.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 1.5e-85 320.9 364 49.5
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.6e-84 317.4 362 50.0
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.6e-82 310.1 230 71.7
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.9e-78 296.2 213 72.8
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.4e-72 277.7 203 71.4
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 2.1e-71 273.9 340 43.8
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 5.1e-70 269.2 209 68.9
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.6e-68 264.2 337 41.8
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 2.2e-68 263.8 340 46.8
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.1e-56 224.9 340 40.6
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 8.8e-54 215.3 226 51.3
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 1.8e-43 181.0 218 47.2
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 7.7e-34 149.1 251 35.9
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 1.0e-30 138.7 189 46.6
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.0e-30 137.1 75 88.0
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.5e-21 108.2 115 55.7
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 3.7e-20 103.6 100 56.0
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 8.3e-20 102.4 116 50.0
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.4e-19 101.7 166 42.8
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 3.5e-18 97.1 349 27.5
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.9e-17 93.6 93 53.8
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 8.0e-15 85.9 324 27.2
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.8e-06 58.2 124 30.6
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 5.2e-06 56.6 36 72.2


User provided reference genes

Program Settings