Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 8.8e-287 989.6 490 100.0
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 5.8e-214 747.7 499 76.8
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.2e-213 745.7 494 75.9
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.9e-212 742.7 488 78.5
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 9.6e-209 730.3 495 75.2
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 6.7e-194 681.0 501 69.7
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 2.5e-193 679.1 513 68.2
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 1.3e-186 656.8 490 70.6
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 3.0e-186 655.6 496 68.1
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.3e-173 613.6 526 60.6
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.4e-170 603.6 518 59.8
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 4.5e-166 588.6 526 59.1
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.7e-165 586.6 525 58.7
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.1e-164 583.9 518 58.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.5e-164 582.8 539 57.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.5e-164 582.8 531 58.2
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 2.6e-161 572.8 514 59.3
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 5.7e-161 571.6 318 88.4
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 1.1e-159 567.4 541 57.3
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 9.1e-159 564.3 512 59.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 8.5e-157 557.8 536 55.4
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.1e-156 557.4 516 57.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.1e-156 557.4 506 57.3
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 7.2e-156 554.7 497 59.4
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 1.4e-154 550.4 516 57.2
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 5.2e-154 548.5 514 57.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 8.8e-154 547.7 548 53.6
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.4e-153 545.8 527 54.3
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 2.2e-152 543.1 525 55.6
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 8.3e-152 541.2 548 53.1
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.1e-151 540.8 520 56.0
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.1e-151 540.8 527 54.3
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.1e-151 540.8 524 54.8
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 9.1e-151 537.7 553 55.0
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.0e-150 536.6 555 53.7
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 2.7e-150 536.2 530 54.0
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 4.5e-150 535.4 515 56.5
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.0e-149 534.3 519 55.9
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 5.0e-149 531.9 591 49.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.9e-148 530.0 568 52.1
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 3.2e-148 529.3 538 54.1
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.2e-147 527.3 540 54.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.1e-147 526.6 418 65.3
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.1e-147 526.6 533 53.7
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.7e-147 526.2 535 53.6
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 2.7e-147 526.2 540 55.2
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 3.6e-147 525.8 538 54.5
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 6.1e-147 525.0 543 53.8
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.0e-146 524.2 503 55.3
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.0e-146 524.2 523 53.5
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.0e-146 524.2 524 53.8
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 6.8e-146 521.5 544 52.0
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 9.8e-145 517.7 441 61.5
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 1.3e-144 517.3 532 53.9
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.7e-144 516.9 491 57.0
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 2.8e-144 516.2 490 55.5
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 4.9e-144 515.4 490 56.9
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 8.3e-144 514.6 490 56.5
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.1e-143 514.2 515 53.2
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 2.0e-142 510.0 459 59.0
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 2.0e-142 510.0 490 56.5
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 4.5e-142 508.8 545 51.7
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 3.8e-141 505.8 493 55.0
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 5.0e-141 505.4 490 55.3
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 6.6e-141 505.0 598 48.7
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-140 503.8 492 56.3
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 2.5e-140 503.1 492 56.3
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 3.3e-140 502.7 489 56.2
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.3e-140 502.7 488 55.1
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 4.7e-139 498.8 501 54.1
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 4.0e-138 495.7 515 52.6
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 3.4e-137 492.7 455 56.9
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 4.4e-137 492.3 500 55.2
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 7.5e-137 491.5 463 56.8
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 9.8e-137 491.1 500 55.0
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 9.8e-137 491.1 500 55.0
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.7e-136 490.3 504 53.4
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 4.9e-136 488.8 528 50.4
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.1e-135 487.6 499 53.3
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 3.5e-134 482.6 524 51.9
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.0e-133 481.1 444 58.1
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.7e-133 480.3 499 53.1
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.7e-133 480.3 491 54.4
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.2e-131 474.2 462 55.6
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.7e-128 463.8 516 48.3
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 7.8e-126 454.9 488 53.1
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 2.3e-125 453.4 517 47.4
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 3.0e-125 453.0 560 47.0
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 3.9e-125 452.6 528 47.7
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.9e-124 450.3 534 47.8
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.7e-120 437.2 359 63.5
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 3.2e-119 433.0 533 48.0
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 5.1e-117 425.6 477 49.5
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.9e-116 423.7 395 58.7
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.4e-114 417.5 254 76.0
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.1e-114 416.4 533 46.0
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.6e-107 392.9 253 73.5
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 7.8e-102 375.2 549 39.9
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.7e-101 374.0 547 40.8
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 2.8e-99 366.7 547 40.0
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 1.3e-91 341.3 305 58.0
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 4.8e-91 339.3 225 72.0
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 4.9e-80 302.8 252 56.3
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.5e-79 300.4 439 42.1
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.0e-77 295.0 394 45.7
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.3e-77 293.9 269 55.8
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 6.1e-70 269.2 246 58.1
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 5.7e-68 262.7 463 34.6
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 8.8e-53 212.2 246 43.5
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.6e-49 201.4 496 29.6
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 7.7e-49 199.1 147 66.0
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.3e-35 155.2 162 50.6
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 4.5e-33 146.7 249 37.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 3.2e-31 140.6 216 40.7
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 4.4e-28 130.2 106 65.1
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 3.8e-24 117.1 229 37.1
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 6.8e-21 106.3 310 27.4
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 3.2e-18 97.4 46 93.5
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.6e-17 95.1 204 33.3
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 7.8e-17 92.8 141 44.0
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 2.3e-16 91.3 188 30.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.5e-15 87.8 65 61.5
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.5e-15 87.8 159 35.8
Psat5g202200 Pisum sativum HOM05D001594 ORTHO05D002862 3.3e-15 87.4 74 64.9
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 2.1e-14 84.7 74 62.2
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.6e-14 84.0 154 31.8
Psat5g202120 Pisum sativum HOM05D001594 ORTHO05D002862 6.2e-14 83.2 74 63.5
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 2.3e-13 81.3 61 62.3
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 6.8e-13 79.7 108 37.0
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 2.0e-12 78.2 65 56.9
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.9e-10 71.6 230 29.6
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.2e-09 68.9 121 35.5
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 7.8e-09 66.2 38 78.9
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.3e-08 64.7 111 36.0
Psat3g124120 Pisum sativum HOM05D001720 ORTHO05D001813 1.1e-07 62.4 44 68.2
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 4.7e-06 57.0 135 26.7


User provided reference genes

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