Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 9.1e-121 438.0 214 100.0
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 1.4e-92 344.4 195 84.1
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 1.3e-90 337.8 193 82.9
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.8e-89 334.0 195 81.0
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.5e-88 329.7 194 81.4
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 7.7e-88 328.6 210 76.2
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 5.0e-87 325.9 194 83.0
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 8.0e-85 318.5 200 77.5
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.2e-83 314.7 225 72.0
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 1.5e-83 314.3 174 86.2
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 8.6e-79 298.5 176 78.4
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 7.3e-70 268.9 189 64.6
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.5e-67 261.2 193 68.4
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 5.8e-67 259.2 188 63.3
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 9.8e-67 258.5 185 63.8
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 2.2e-66 257.3 187 66.3
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 2.2e-66 257.3 189 63.5
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 3.7e-66 256.5 185 64.3
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 8.3e-66 255.4 186 64.0
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.1e-65 255.0 170 67.6
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.9e-65 254.2 171 67.8
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 7.0e-65 252.3 182 67.6
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 7.0e-65 252.3 188 63.3
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 7.0e-65 252.3 170 66.5
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 1.2e-64 251.5 187 60.4
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 1.6e-64 251.1 188 63.3
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 2.1e-64 250.8 173 67.6
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.7e-64 250.4 212 57.5
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 3.5e-64 250.0 183 63.4
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 3.5e-64 250.0 194 60.3
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.5e-64 250.0 188 62.2
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 4.6e-64 249.6 197 59.4
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 6.0e-64 249.2 187 59.9
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 7.8e-64 248.8 188 61.7
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 7.8e-64 248.8 187 59.9
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 1.0e-63 248.4 181 62.4
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 2.3e-63 247.3 184 61.4
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 5.1e-63 246.1 191 60.2
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 6.6e-63 245.7 185 60.0
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 6.6e-63 245.7 187 62.6
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.1e-62 245.0 176 62.5
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 2.5e-62 243.8 187 58.8
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 2.8e-61 240.4 192 56.2
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 2.8e-61 240.4 181 60.2
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.7e-61 239.6 186 60.8
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 4.7e-61 239.6 187 60.4
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 5.2e-60 236.1 185 56.2
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.2e-60 236.1 187 61.5
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.5e-59 234.6 206 53.9
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.0e-59 234.2 197 55.8
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 3.4e-59 233.4 183 57.9
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 3.4e-59 233.4 187 58.3
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 3.7e-58 229.9 185 56.2
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 6.4e-58 229.2 163 62.6
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 9.2e-57 225.3 215 51.2
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.2e-56 224.9 214 53.3
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 2.1e-56 224.2 187 56.1
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 2.1e-56 224.2 219 52.5
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 3.5e-56 223.4 187 56.7
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 3.5e-56 223.4 187 56.1
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.5e-56 223.4 183 55.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 4.6e-56 223.0 183 54.6
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 6.0e-56 222.6 159 64.2
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.3e-55 221.5 181 56.4
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 8.6e-55 218.8 191 54.5
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 8.6e-55 218.8 157 63.1
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.1e-54 218.4 180 58.3
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 1.5e-54 218.0 161 61.5
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 1.9e-54 217.6 170 59.4
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 7.3e-54 215.7 229 48.5
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 9.6e-54 215.3 164 59.1
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 2.1e-53 214.2 164 58.5
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 2.1e-53 214.2 164 59.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 2.8e-53 213.8 167 60.5
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 3.6e-53 213.4 164 58.5
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 4.7e-53 213.0 164 58.5
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.4e-52 211.5 194 53.6
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 4.0e-52 209.9 161 59.6
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 6.8e-52 209.1 161 60.2
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 5.4e-49 199.5 200 49.0
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.4e-49 199.5 138 65.9
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 1.2e-48 198.4 220 46.8
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 2.7e-48 197.2 154 57.1
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 3.5e-48 196.8 153 57.5
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 3.9e-47 193.4 158 57.6
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.8e-44 184.5 131 66.4
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 9.0e-44 182.2 136 61.8
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 1.0e-39 168.7 203 44.8
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.1e-38 165.2 160 50.6
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 8.1e-37 159.1 164 48.2
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 4.6e-32 143.3 133 49.6
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 1.8e-28 131.3 123 52.8
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 5.8e-27 126.3 102 54.9
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 4.2e-25 120.2 77 70.1
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.5e-22 111.7 131 42.7
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 3.1e-20 104.0 131 35.9
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 8.4e-18 95.9 136 36.0
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 1.4e-17 95.1 128 33.6
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.0e-15 89.0 139 35.3
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 6.7e-15 86.3 54 72.2
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 2.5e-14 84.3 131 34.4
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 7.4e-14 82.8 69 56.5
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.6e-13 81.6 54 68.5
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 8.5e-10 69.3 49 59.2
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 1.1e-09 68.9 97 42.3
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.4e-09 68.6 50 56.0
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 7.2e-09 66.2 43 65.1
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.2e-08 65.5 45 62.2
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 3.6e-08 63.9 39 69.2
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.1e-06 58.9 46 56.5


User provided reference genes

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