Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.0e-260 902.9 456 100.0
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 2.0e-240 835.5 456 91.7
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 2.0e-237 825.5 456 90.8
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 5.9e-237 823.9 456 90.4
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 5.9e-237 823.9 456 90.4
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 7.7e-237 823.5 456 89.9
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 3.3e-235 818.1 456 89.7
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.6e-232 808.5 456 89.5
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 7.0e-230 800.4 456 88.6
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 2.7e-229 798.5 452 87.8
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 7.8e-229 797.0 458 87.3
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 1.7e-228 795.8 458 87.1
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.4e-223 777.3 458 84.9
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 1.1e-222 776.5 457 84.7
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 1.9e-222 775.8 455 85.1
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 5.4e-222 774.2 456 84.6
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 4.6e-221 771.2 456 84.6
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 5.0e-220 767.7 456 84.4
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 6.6e-220 767.3 464 83.6
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.5e-219 766.1 456 84.2
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 2.5e-219 765.4 457 85.3
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 2.5e-219 765.4 457 85.3
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 7.3e-219 763.8 457 85.1
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 1.6e-218 762.7 456 83.8
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 6.2e-218 760.8 456 83.6
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 8.1e-218 760.4 449 84.6
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 1.1e-217 760.0 456 84.2
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.8e-217 759.2 456 83.1
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 1.8e-217 759.2 456 83.6
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 3.1e-217 758.4 456 82.7
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 5.2e-217 757.7 456 83.6
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.2e-216 756.5 456 82.9
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 2.0e-216 755.7 456 83.1
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 2.0e-216 755.7 427 87.8
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 2.6e-216 755.4 456 81.8
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 7.5e-216 753.8 457 83.6
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.2e-215 752.3 456 82.0
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 2.2e-215 752.3 449 83.3
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 2.9e-215 751.9 456 82.2
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 3.7e-215 751.5 427 86.9
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 1.1e-214 750.0 427 87.1
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 3.2e-214 748.4 456 81.6
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.2e-213 746.5 460 81.5
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 4.6e-213 744.6 457 81.4
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 1.3e-212 743.0 458 81.0
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.3e-212 742.3 462 80.5
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 3.9e-212 741.5 457 81.2
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.1e-212 741.1 462 80.5
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.1e-211 740.0 462 80.5
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.5e-211 739.6 462 80.3
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.5e-211 739.6 462 80.1
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 1.9e-211 739.2 420 86.9
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 3.3e-211 738.4 457 80.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 7.3e-211 737.3 437 84.4
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 9.5e-211 736.9 462 80.1
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 1.2e-210 736.5 457 80.5
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 2.1e-210 735.7 455 80.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 2.8e-210 735.3 457 80.3
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 2.8e-210 735.3 457 80.1
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 4.7e-210 734.6 506 75.3
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.4e-209 733.0 455 80.2
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 2.0e-208 729.2 459 79.7
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 2.0e-208 729.2 459 79.7
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 3.4e-208 728.4 454 81.3
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 4.4e-208 728.0 421 85.0
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 5.8e-208 727.6 452 81.4
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 7.6e-208 727.2 413 86.4
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 2.2e-207 725.7 427 83.8
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 2.2e-207 725.7 451 80.9
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 2.9e-207 725.3 459 79.5
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 2.9e-207 725.3 459 79.5
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 3.8e-207 724.9 429 85.3
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 3.8e-207 724.9 429 85.3
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 3.8e-207 724.9 461 80.0
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 4.9e-207 724.5 420 85.5
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 4.9e-207 724.5 451 80.9
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-206 723.4 459 79.3
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 1.1e-206 723.4 459 79.3
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 2.4e-206 722.2 452 79.6
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 2.4e-206 722.2 463 77.1
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 4.1e-206 721.5 464 79.1
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 1.2e-205 719.9 464 76.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 3.5e-205 718.4 453 78.6
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 6.0e-205 717.6 456 78.7
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 7.8e-205 717.2 427 83.1
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.7e-204 716.1 427 83.4
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 1.5e-203 713.0 461 80.7
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 1.9e-203 712.6 425 84.0
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 3.3e-203 711.8 463 76.0
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 7.3e-203 710.7 440 80.7
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 9.6e-203 710.3 410 84.9
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 2.1e-202 709.1 428 82.2
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 4.7e-202 708.0 466 77.5
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 3.1e-201 705.3 431 81.9
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 2.9e-199 698.7 465 76.1
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 4.9e-199 698.0 438 79.7
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 1.2e-197 693.3 413 82.8
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 2.4e-193 679.1 391 84.9
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 2.9e-191 672.2 470 74.0
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 4.2e-190 668.3 524 67.9
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.1e-189 666.0 459 74.9
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 3.0e-188 662.1 455 75.8
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 5.1e-188 661.4 384 85.2
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.7e-186 655.2 384 84.1
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 9.0e-185 650.6 452 73.9
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 1.2e-184 650.2 460 73.3
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 2.6e-184 649.0 397 81.9
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 1.1e-182 643.7 413 77.0
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 1.3e-180 636.7 422 75.1
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 8.2e-178 627.5 414 76.3
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 5.8e-176 621.3 413 75.5
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 1.0e-175 620.5 444 71.6
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 2.2e-175 619.4 457 71.3
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 3.2e-174 615.5 427 71.9
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 7.1e-174 614.4 411 74.2
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.1e-173 612.8 409 73.8
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 5.9e-168 594.7 410 71.7
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 9.7e-163 577.4 481 65.1
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 6.9e-161 571.2 441 68.7
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 9.4e-150 534.3 551 55.7
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.8e-148 530.0 330 80.6
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 1.5e-142 510.4 429 59.0
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.8e-140 503.4 331 77.0
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 2.8e-130 469.5 411 58.4
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 2.4e-121 439.9 369 61.2
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 3.3e-118 429.5 369 60.4
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 3.5e-112 409.5 252 81.0
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 3.9e-111 406.0 275 73.8
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.6e-109 400.6 441 49.0
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.6e-104 384.0 407 52.1
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 2.1e-80 303.9 173 88.4
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.6e-79 298.9 189 81.5
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 2.1e-77 293.9 310 52.6
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 2.0e-75 287.3 422 41.2
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 5.8e-59 232.6 359 40.9
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.9e-55 219.9 136 75.0
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 3.0e-47 193.7 424 34.2
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.3e-46 190.3 117 82.9
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 4.8e-29 133.3 72 87.5
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 6.3e-29 132.9 81 87.7
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 2.4e-28 131.0 83 74.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 1.6e-27 128.3 69 88.4
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 2.2e-21 107.8 105 58.1
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 2.2e-21 107.8 67 86.6
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 1.4e-20 105.1 76 68.4
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 9.4e-17 92.4 61 75.4
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 3.0e-15 87.4 296 26.7
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 3.0e-15 87.4 59 78.0
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 7.7e-11 72.8 50 70.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 6.1e-08 63.2 109 40.4
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 6.1e-08 63.2 109 40.4
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 1.8e-07 61.6 74 48.6
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 1.5e-06 58.5 75 46.7
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 9.8e-06 55.8 156 29.5


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