Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 4.6e-145 518.1 298 100.0
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 6.4e-99 364.8 298 69.8
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 4.8e-94 348.6 298 70.8
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.9e-87 326.6 319 59.9
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.7e-83 313.5 301 68.8
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 2.9e-83 312.8 292 63.0
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 3.6e-81 305.8 292 60.6
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 5.7e-79 298.5 298 61.4
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.8e-77 293.5 297 62.0
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 3.6e-73 279.3 254 63.8
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 2.2e-67 260.0 216 63.9
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 2.5e-66 256.5 298 51.3
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.6e-65 253.8 307 48.2
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.6e-65 253.8 301 52.2
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 2.3e-64 250.0 313 48.2
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 5.2e-64 248.8 297 49.5
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 8.8e-64 248.1 301 50.2
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 2.6e-63 246.5 306 49.7
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 4.4e-63 245.7 298 49.3
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 5.7e-63 245.4 308 49.4
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 7.4e-63 245.0 215 60.0
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.7e-62 243.8 212 60.4
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 3.7e-62 242.7 300 47.0
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 6.3e-62 241.9 309 51.5
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 1.1e-61 241.1 309 51.1
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.8e-61 240.4 304 51.6
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 3.1e-61 239.6 305 47.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 4.1e-61 239.2 309 50.5
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 4.1e-61 239.2 296 47.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 4.1e-61 239.2 304 49.7
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 9.1e-61 238.0 296 47.3
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 3.5e-60 236.1 308 50.3
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 5.9e-60 235.3 295 48.5
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.9e-59 233.0 361 48.5
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 3.8e-59 232.6 292 47.9
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.1e-58 231.1 308 45.8
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.1e-58 231.1 215 58.6
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.5e-58 230.7 292 45.5
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 1.9e-58 230.3 211 62.1
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.5e-58 229.9 239 58.2
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 4.2e-58 229.2 254 55.1
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.2e-57 227.6 215 57.2
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 1.6e-57 227.3 258 53.9
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 8.0e-57 224.9 213 59.2
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 8.0e-57 224.9 222 56.3
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.3e-56 223.4 215 58.1
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 5.2e-56 222.2 208 59.1
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 3.3e-55 219.5 298 46.0
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 4.4e-55 219.2 298 47.3
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 4.4e-55 219.2 236 54.2
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 7.5e-55 218.4 218 55.5
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 9.7e-55 218.0 292 47.9
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.3e-54 217.6 305 46.6
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.3e-54 217.6 359 42.1
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.7e-54 217.2 211 57.3
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 3.7e-54 216.1 302 45.7
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 6.3e-54 215.3 203 54.7
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.1e-53 214.5 303 48.5
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.8e-53 213.8 258 50.4
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 4.1e-53 212.6 221 52.0
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 7.0e-53 211.8 310 46.1
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 9.1e-53 211.5 291 46.7
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 2.0e-52 210.3 249 49.4
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 2.0e-52 210.3 221 51.6
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 2.0e-52 210.3 223 52.0
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.7e-52 209.9 211 57.8
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 4.5e-52 209.1 233 48.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 4.5e-52 209.1 221 51.1
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 5.9e-52 208.8 221 51.6
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 5.9e-52 208.8 232 52.2
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 5.9e-52 208.8 223 52.5
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 1.3e-51 207.6 218 54.6
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.7e-51 207.2 220 52.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.1e-50 204.5 211 57.3
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.5e-50 204.1 251 49.8
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.9e-50 203.8 246 50.4
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 4.2e-50 202.6 289 42.6
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 1.2e-49 201.1 306 43.1
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.6e-49 200.7 273 49.8
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.7e-49 199.9 252 48.8
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 2.7e-49 199.9 209 55.0
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.4e-48 197.6 219 50.2
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.4e-48 197.6 209 55.0
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 1.8e-48 197.2 208 51.4
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 4.0e-48 196.1 254 46.9
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 6.8e-48 195.3 210 51.9
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 8.8e-48 194.9 289 45.0
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.2e-47 194.5 310 43.2
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.5e-47 194.1 248 46.0
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.2e-46 190.3 206 50.0
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 2.8e-46 189.9 198 55.6
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.1e-45 184.9 192 54.7
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.0e-44 183.7 193 53.4
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 3.5e-44 183.0 205 51.7
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 7.7e-44 181.8 204 53.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 2.2e-43 180.3 205 52.2
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.4e-39 166.4 175 59.4
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.4e-37 161.0 298 38.3
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.0e-36 157.1 289 37.4
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.5e-26 124.4 215 43.7
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 1.6e-25 120.9 206 38.3
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.8e-24 117.5 214 38.3
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.4e-23 112.8 95 64.2
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 2.9e-22 110.2 203 36.0
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.9e-18 97.4 150 44.0
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 6.8e-16 89.0 62 67.7
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.4e-15 86.7 122 46.7
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.9e-14 83.6 145 43.4
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 7.1e-13 79.0 120 43.3
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 1.2e-12 78.2 126 39.7
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 8.6e-11 72.0 115 36.5
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.3e-10 70.1 156 39.7
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 3.3e-10 70.1 115 34.8
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-08 65.1 55 60.0
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.1e-08 63.5 105 42.9
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.0e-08 63.2 130 37.7
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.6e-07 60.5 102 39.2
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.2e-06 57.4 42 64.3


User provided reference genes

Program Settings