Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 3.5e-204 714.9 409 100.0
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 7.1e-149 531.2 408 67.9
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.4e-144 516.2 409 66.5
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.3e-142 510.4 412 64.8
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 5.5e-141 505.0 409 66.7
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.6e-140 501.9 397 67.8
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.1e-136 490.7 411 61.8
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.3e-134 483.8 394 64.5
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 8.5e-134 481.1 369 66.1
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 5.5e-133 478.4 415 62.4
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 7.9e-132 474.6 402 60.9
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 8.2e-129 464.5 410 58.3
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.8e-128 463.4 405 60.5
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.0e-126 457.6 404 59.9
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.0e-123 447.6 368 65.2
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 1.2e-119 434.1 403 55.8
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.6e-119 433.0 311 72.3
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 2.6e-119 433.0 366 59.0
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 2.9e-118 429.5 377 58.6
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 6.5e-118 428.3 368 59.2
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 6.5e-118 428.3 406 55.7
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 6.7e-115 418.3 361 61.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.1e-114 417.5 391 55.5
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 3.3e-114 416.0 390 55.6
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.3e-114 416.0 317 69.4
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.7e-114 415.2 349 61.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 2.0e-111 406.8 350 58.9
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 7.7e-111 404.8 352 59.9
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 3.8e-110 402.5 343 67.9
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 8.5e-110 401.4 349 57.9
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 2.5e-109 399.8 343 67.9
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.6e-108 397.1 363 56.2
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 2.1e-108 396.7 357 61.9
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.0e-107 392.9 357 68.1
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.0e-107 392.9 349 55.0
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 3.0e-107 392.9 349 55.6
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 4.0e-107 392.5 349 55.3
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.2e-107 392.1 349 55.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 6.8e-107 391.7 402 61.2
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 8.8e-107 391.3 361 64.3
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.3e-105 387.5 385 51.4
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.8e-105 385.6 349 54.2
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 8.3e-105 384.8 381 63.0
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.1e-104 384.4 349 56.2
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.8e-104 383.6 362 64.1
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.1e-104 382.9 366 56.0
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 4.1e-104 382.5 369 60.4
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 7.0e-104 381.7 378 53.2
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.6e-103 380.6 370 55.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.7e-103 378.3 372 62.4
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.8e-102 375.9 350 56.0
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 6.5e-102 375.2 360 51.7
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 6.5e-102 375.2 374 50.8
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.9e-101 373.6 363 54.3
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 9.4e-101 371.3 341 55.4
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 9.4e-101 371.3 376 53.2
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 4.0e-99 365.9 372 58.3
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.5e-98 364.0 381 47.2
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.0e-98 363.6 357 51.5
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 3.4e-98 362.8 366 49.5
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 5.7e-98 362.1 360 49.2
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 7.5e-98 361.7 362 49.7
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.3e-97 360.9 387 47.8
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 3.7e-97 359.4 314 55.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 6.3e-97 358.6 358 51.4
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 2.7e-95 353.2 392 49.2
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 3.5e-95 352.8 408 47.1
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.5e-95 352.4 343 53.1
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 5.9e-95 352.1 363 59.5
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.0e-94 351.3 318 53.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.0e-94 351.3 393 56.7
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.7e-94 350.5 361 49.3
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.3e-94 350.1 384 47.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.9e-94 349.7 310 53.2
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.1e-93 347.8 376 57.4
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.1e-93 347.8 376 57.7
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.9e-93 347.1 409 49.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.5e-93 346.7 396 46.0
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 4.2e-93 345.9 312 54.8
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 7.2e-93 345.1 356 48.9
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 9.5e-93 344.7 387 55.3
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.2e-92 344.4 376 57.4
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 1.6e-92 344.0 340 50.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.8e-92 343.2 369 55.8
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 3.6e-92 342.8 371 57.7
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.7e-92 342.4 391 55.0
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.7e-92 342.4 362 53.3
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 6.1e-92 342.0 388 46.1
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 6.1e-92 342.0 390 48.5
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 8.0e-92 341.7 411 54.3
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.4e-91 340.9 358 59.2
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.3e-91 340.1 371 48.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 5.2e-91 339.0 380 46.3
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 2.6e-90 336.7 382 54.5
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 5.7e-90 335.5 353 52.1
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 7.5e-90 335.1 351 50.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.3e-89 334.3 372 48.7
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 2.2e-89 333.6 362 49.7
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 4.9e-89 332.4 392 54.8
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 8.3e-89 331.6 348 52.0
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 1.1e-88 331.3 362 49.2
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.8e-88 330.5 337 51.3
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 5.4e-88 328.9 341 57.8
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.6e-87 327.4 357 50.4
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.0e-87 327.0 349 49.9
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.0e-87 327.0 357 50.4
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.0e-87 327.0 369 50.4
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.5e-87 326.2 358 46.9
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 4.5e-87 325.9 366 47.5
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 4.5e-87 325.9 337 47.8
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 5.9e-87 325.5 331 49.5
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.0e-86 324.7 340 47.9
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 1.3e-86 324.3 372 56.5
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 3.9e-86 322.8 353 50.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 5.0e-86 322.4 324 50.6
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 8.6e-86 321.6 406 52.5
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.9e-85 320.5 398 53.3
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.9e-85 320.5 398 53.3
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 1.6e-84 317.4 406 52.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 2.8e-84 316.6 407 42.8
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 4.0e-83 312.8 221 64.7
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 6.8e-83 312.0 345 47.5
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-82 311.2 409 44.7
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.4e-82 309.7 346 46.8
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 7.5e-82 308.5 406 51.7
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.1e-80 304.7 354 45.5
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.4e-80 304.3 336 46.4
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 2.4e-80 303.5 405 43.2
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 5.4e-80 302.4 354 45.2
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.0e-79 300.4 341 56.3
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 8.6e-78 295.0 447 38.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.1e-77 294.7 366 44.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 2.9e-73 280.0 216 59.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.2e-72 275.0 312 53.2
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 9.2e-72 275.0 312 61.2
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 4.3e-69 266.2 305 45.6
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.8e-68 263.5 298 48.7
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.5e-66 257.7 287 44.9
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.2e-65 253.8 349 40.4
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 7.8e-63 245.4 323 52.6
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 1.0e-62 245.0 323 45.5
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.7e-60 236.1 342 44.7
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.2e-60 235.7 342 45.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.9e-59 231.9 339 42.8
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.7e-54 217.6 320 37.5
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.9e-54 216.5 189 52.4
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.9e-53 214.2 325 35.7
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.4e-49 199.1 326 35.6
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.6e-47 194.5 362 32.6
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 4.6e-47 193.0 290 38.6
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.3e-45 185.7 177 52.0
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.0e-42 177.6 138 60.9
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.7e-41 174.5 323 31.0
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.9e-41 172.9 328 35.4
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 6.4e-41 172.6 328 35.4
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 6.0e-39 166.0 326 28.8
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.5e-37 160.6 228 40.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.8e-36 156.4 354 29.9
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 6.2e-36 156.0 273 30.4
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 6.2e-36 156.0 288 31.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.8e-35 154.5 119 62.2
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.0e-30 137.1 130 52.3
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.9e-29 134.4 160 43.8
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.3e-29 133.3 191 37.7
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.3e-28 131.7 164 62.8
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.1e-19 100.1 138 38.4
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 4.5e-18 96.7 82 56.1
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.2e-17 94.4 259 32.4
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 5.5e-16 89.7 110 44.5
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.0e-14 84.0 106 38.7
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 4.5e-10 70.1 58 53.4
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 2.2e-09 67.8 318 22.0
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 9.4e-08 62.4 101 36.6


User provided reference genes

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