Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 0.0e+00 1178.3 610 100.0
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.2e-255 885.6 588 77.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 3.2e-254 881.7 610 74.1
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.1e-253 879.0 611 75.1
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 8.7e-252 873.6 610 75.4
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 2.6e-248 862.1 608 73.5
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.4e-248 861.7 614 73.5
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 4.6e-245 851.3 612 72.9
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 5.3e-241 837.8 637 69.2
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.4e-240 835.1 637 69.1
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 6.5e-239 830.9 637 68.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 5.9e-224 781.2 637 65.6
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.2e-223 779.2 610 68.5
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.6e-189 665.6 593 60.4
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.8e-188 663.3 598 58.9
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 5.8e-187 658.3 654 56.3
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 2.4e-185 652.9 595 58.7
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 6.6e-183 644.8 595 59.3
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 2.3e-180 636.3 589 57.6
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 7.8e-176 621.3 594 55.7
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 1.1e-174 617.5 595 55.1
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 4.3e-174 615.5 598 55.2
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.6e-173 613.6 593 56.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.6e-173 613.6 592 56.2
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.4e-172 610.5 599 53.6
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 3.2e-169 599.4 588 54.1
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 4.2e-169 599.0 569 56.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.5e-168 595.9 590 55.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.5e-168 595.9 584 53.9
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 3.0e-167 592.8 605 53.2
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 5.6e-166 588.6 601 53.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.1e-164 582.8 593 53.3
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 4.0e-164 582.4 579 53.0
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-163 580.1 589 53.8
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 2.9e-162 576.2 590 51.5
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.9e-161 573.5 589 53.7
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.5e-160 569.3 589 53.3
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 6.0e-160 568.5 592 52.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.0e-160 568.5 552 56.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 6.0e-160 568.5 590 52.4
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 5.6e-158 562.0 591 51.1
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 2.1e-157 560.1 591 52.3
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.1e-157 560.1 587 51.8
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.8e-157 559.7 599 53.8
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.4e-156 557.4 590 51.0
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.4e-156 556.6 654 49.4
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 2.6e-155 553.1 590 51.0
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 4.2e-153 545.8 590 52.4
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 5.1e-151 538.9 640 47.2
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.3e-150 536.2 588 49.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.1e-148 531.2 597 50.4
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.8e-147 525.4 593 47.9
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.3e-146 524.2 585 48.9
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.7e-146 523.9 658 45.3
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 6.5e-146 521.9 593 48.1
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.8e-143 513.8 652 44.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.8e-143 513.8 593 49.2
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.5e-139 500.7 579 49.9
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 2.9e-138 496.5 575 52.5
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.9e-138 496.5 597 48.2
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 5.0e-138 495.7 582 46.6
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.2e-136 491.1 598 48.0
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.0e-135 486.5 594 46.5
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 8.2e-133 478.4 521 51.4
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 3.4e-131 473.0 572 48.1
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 5.9e-131 472.2 590 45.9
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 3.8e-130 469.5 606 44.9
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.2e-129 466.5 602 45.8
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 1.6e-128 464.2 617 45.4
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 6.7e-127 458.8 606 44.6
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 3.7e-125 453.0 341 69.8
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 5.9e-123 445.7 610 42.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.4e-121 441.0 615 43.6
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.9e-121 440.7 477 49.3
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 5.5e-121 439.1 603 43.1
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 2.1e-120 437.2 605 43.1
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 3.0e-119 433.3 602 42.5
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.6e-118 430.3 522 45.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.8e-117 426.8 602 42.2
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.4e-116 423.7 635 42.4
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.5e-115 419.5 380 58.9
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.9e-115 419.1 380 58.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.8e-111 407.5 603 41.3
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.3e-111 407.1 596 40.1
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.0e-111 406.4 380 58.2
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.1e-110 404.8 496 48.6
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.4e-108 397.1 410 52.7
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 4.1e-108 396.4 509 44.8
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 3.5e-107 393.3 494 45.7
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 4.7e-104 382.9 604 40.9
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 5.2e-103 379.4 578 39.4
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.7e-102 375.9 636 38.4
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 5.7e-102 375.9 594 38.0
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.0e-99 367.5 380 53.2
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.3e-98 364.8 620 39.4
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.2e-98 364.0 383 51.7
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.0e-95 355.1 458 50.0
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.5e-89 334.7 408 45.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.0e-82 312.0 603 35.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 2.5e-73 280.8 274 54.7
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.4e-70 270.4 445 37.8
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.8e-56 224.2 303 44.9
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.9e-44 184.9 493 29.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 3.1e-39 167.5 298 35.6
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.7e-37 161.8 525 28.2
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.9e-37 161.0 564 27.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.8e-37 160.6 514 27.8
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.0e-34 151.0 223 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 3.9e-34 150.6 594 26.9
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.3e-33 147.5 91 79.1
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 8.1e-32 142.9 162 48.8
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.5e-28 131.3 143 51.0
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.3e-26 125.6 129 58.1
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 3.4e-22 110.9 165 39.4
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 8.5e-21 106.3 96 59.4
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 3.1e-15 87.8 75 57.3
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 1.0e-13 82.8 66 66.7
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 6.5e-13 80.1 251 27.5
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-09 68.6 63 52.4
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 5.7e-09 67.0 62 53.2
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.7e-08 65.5 52 61.5
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.8e-08 63.9 63 50.8
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.2e-06 59.3 51 58.8


User provided reference genes

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