Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 6.0e-129 464.2 231 100.0
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 2.9e-99 365.5 230 83.0
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 4.2e-98 361.7 230 82.2
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 8.0e-97 357.5 230 80.4
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 8.0e-97 357.5 230 80.4
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.8e-96 356.3 230 80.0
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.8e-96 356.3 230 80.0
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 4.0e-96 355.1 230 80.9
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 8.8e-96 354.0 230 80.4
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.7e-95 351.3 227 80.6
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.7e-95 351.3 227 80.6
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 7.5e-95 350.9 230 80.4
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 9.7e-95 350.5 230 80.0
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.7e-94 349.7 230 80.0
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.7e-94 349.7 230 80.0
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.7e-94 349.7 230 80.0
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 2.2e-94 349.4 230 80.0
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 3.7e-94 348.6 230 80.0
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 3.7e-94 348.6 230 80.0
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 3.7e-94 348.6 230 80.0
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 3.7e-94 348.6 230 80.0
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 6.3e-94 347.8 230 79.6
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 6.3e-94 347.8 230 79.6
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 6.3e-94 347.8 230 79.6
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 1.1e-93 347.1 230 80.0
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 1.1e-93 347.1 230 79.6
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 1.8e-93 346.3 230 79.6
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 5.3e-93 344.7 230 79.1
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 9.1e-93 344.0 230 78.7
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 2.0e-92 342.8 230 78.7
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.5e-92 342.0 219 80.4
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.0e-91 340.5 219 81.3
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 1.0e-91 340.5 226 79.6
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 3.8e-91 338.6 228 78.5
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 1.1e-90 337.0 229 77.7
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 1.9e-90 336.3 219 80.4
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 4.0e-88 328.6 199 84.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.5e-87 326.6 202 82.7
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.5e-87 326.6 202 82.7
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 5.7e-87 324.7 205 82.4
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 2.4e-85 319.3 199 82.4
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 2.9e-83 312.4 200 81.5
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 1.1e-82 310.5 219 76.7
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 3.6e-81 305.4 203 78.8
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 6.1e-81 304.7 198 78.8
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 3.0e-80 302.4 199 77.4
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 2.0e-79 299.7 199 77.9
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.7e-78 296.6 203 75.9
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.2e-78 296.2 209 75.1
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 4.9e-78 295.0 192 79.7
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 4.9e-78 295.0 199 76.4
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 2.0e-76 289.7 188 80.3
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 5.0e-75 285.0 193 78.2
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 3.3e-74 282.3 199 75.9
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.0e-72 277.3 192 77.6
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 1.0e-72 277.3 178 78.7
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.4e-72 276.9 210 71.4
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 1.1e-69 267.3 172 80.8
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 4.1e-69 265.4 168 81.5
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.0e-67 260.8 209 70.3
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 7.3e-66 254.6 190 72.6
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 4.7e-65 251.9 158 81.0
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 5.2e-64 248.4 155 81.3
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 6.8e-64 248.1 230 62.2
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 6.4e-54 214.9 135 80.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.9e-53 213.4 133 81.2
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-52 210.7 218 57.3
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.8e-48 196.8 129 78.3
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 1.8e-48 196.8 122 81.1
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 3.4e-47 192.6 135 74.1
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.2e-46 189.9 116 83.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.4e-45 185.3 116 79.3
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 1.6e-44 183.7 112 81.2
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 6.9e-40 168.3 155 60.6
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-37 160.6 107 79.4
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 2.4e-37 159.8 108 75.0
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 5.4e-37 158.7 95 84.2
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 1.5e-34 150.6 97 79.4
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 1.1e-32 144.4 105 72.4
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 1.1e-32 144.4 105 72.4
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 3.4e-31 139.4 88 78.4
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 4.5e-31 139.0 101 75.2
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 9.9e-31 137.9 99 75.8
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 9.3e-29 131.3 75 86.7
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 1.6e-28 130.6 73 87.7
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 7.9e-28 128.3 77 80.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.6e-25 120.6 96 69.8
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 6.2e-25 118.6 68 85.3
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 8.1e-25 118.2 72 79.2
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 2.6e-23 113.2 69 79.7
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.3e-22 110.9 155 48.4
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 3.8e-22 109.4 187 35.3
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.4e-22 108.2 87 70.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 9.3e-21 104.8 66 78.8
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 6.0e-20 102.1 65 78.5
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 3.9e-19 99.4 60 81.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.6e-18 95.5 69 72.5
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 7.6e-15 85.1 58 79.3
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 1.7e-14 84.0 55 76.4
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 5.1e-11 72.4 134 39.6
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-10 70.5 79 57.0
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 1.1e-08 64.7 44 75.0
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 5.3e-08 62.4 40 77.5
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 4.5e-07 59.3 37 81.1
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 6.5e-06 55.5 46 65.2


User provided reference genes

Program Settings