Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C36T19 Lonicera japonica HOM05D000063 ORTHO05D008022 2.4e-77 292.0 135 100.0
Dinv20434 Davidia involucrata HOM05D000063 ORTHO05D008022 6.4e-54 214.2 131 73.3
Lj9P523T38 Lonicera japonica HOM05D000063 ORTHO05D008022 9.2e-53 210.3 129 73.6
Peaxi162Scf00038g00217 Petunia axillaris HOM05D000063 ORTHO05D008022 1.6e-52 209.5 129 72.1
Thecc.06G120700 Theobroma cacao HOM05D000063 ORTHO05D008022 3.5e-52 208.4 129 72.1
Hma1.2p1_0291F.1_g115080 Hydrangea macrophylla HOM05D000063 ORTHO05D008022 4.6e-52 208.0 131 70.2
MD09G1183000 Malus domestica HOM05D000063 ORTHO05D008022 1.7e-51 206.1 125 74.4
Prupe.3G040400 Prunus persica HOM05D000063 ORTHO05D008022 1.7e-51 206.1 129 70.5
COL.COLO4_30753 Corchorus olitorius HOM05D000063 ORTHO05D008022 2.3e-51 205.7 130 72.3
Manes.04G145200 Manihot esculenta HOM05D000063 ORTHO05D008022 2.3e-51 205.7 130 68.5
GSVIVG01016753001 Vitis vinifera HOM05D000063 ORTHO05D008022 2.3e-51 205.7 132 72.0
Potri.001G168800 Populus trichocarpa HOM05D000063 ORTHO05D008022 3.9e-51 204.9 131 70.2
Manes.11G019900 Manihot esculenta HOM05D000063 ORTHO05D008022 6.6e-51 204.1 126 70.6
Sabra03G0038400 Salix brachista HOM05D000063 ORTHO05D008022 1.5e-50 203.0 131 67.9
Atru.chr1.3964 Acer truncatum HOM05D000063 ORTHO05D008022 1.9e-50 202.6 126 70.6
Atru.chr1.3968 Acer truncatum HOM05D000063 ORTHO05D008022 1.9e-50 202.6 126 70.6
FAN20G2699 Fragaria x ananassa HOM05D000063 ORTHO05D008022 1.9e-50 202.6 126 71.4
Nitab4.5_0007255g0040 Nicotiana tabacum HOM05D000063 ORTHO05D008022 2.5e-50 202.2 129 69.8
DCAR_022694 Daucus carota HOM05D000063 ORTHO05D008022 3.3e-50 201.8 131 67.9
Gohir.D10G055200 Gossypium hirsutum HOM05D000063 ORTHO05D008022 3.3e-50 201.8 131 69.5
FAN15G2641 Fragaria x ananassa HOM05D000063 ORTHO05D008022 5.6e-50 201.1 126 70.6
Gohir.A10G053400 Gossypium hirsutum HOM05D000063 ORTHO05D008022 7.3e-50 200.7 129 69.8
RcHm_v2.0_Chr2g0145631 Rosa chinensis HOM05D000063 ORTHO05D008022 9.5e-50 200.3 125 71.2
PGSC0003DMG400039263 Solanum tuberosum HOM05D000063 ORTHO05D008022 9.5e-50 200.3 125 70.4
Gorai.011G058900 Gossypium raimondii HOM05D000063 ORTHO05D008022 1.2e-49 199.9 129 69.8
CAN.G668.46 Capsicum annuum HOM05D000063 ORTHO05D008022 1.6e-49 199.5 125 70.4
Potri.003G065400 Populus trichocarpa HOM05D000063 ORTHO05D008022 1.6e-49 199.5 131 67.2
TWI79G0395 Tripterygium wilfordii HOM05D000063 ORTHO05D008022 1.6e-49 199.5 129 69.8
CSS0046991 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008022 2.1e-49 199.1 131 68.7
CAN.G1455.5 Capsicum annuum HOM05D000063 ORTHO05D008022 2.1e-49 199.1 127 70.1
Cpa.g.sc25.124 Carica papaya HOM05D000063 ORTHO05D008022 2.1e-49 199.1 131 65.6
Nitab4.5_0004422g0030 Nicotiana tabacum HOM05D000063 ORTHO05D008022 2.1e-49 199.1 125 70.4
PGSC0003DMG400014099 Solanum tuberosum HOM05D000063 ORTHO05D008022 2.8e-49 198.7 127 69.3
Solyc03g123400.1 Solanum lycopersicum HOM05D000063 ORTHO05D008022 6.2e-49 197.6 125 69.6
Sopen12g023800 Solanum pennellii HOM05D000063 ORTHO05D008022 6.2e-49 197.6 127 69.3
TWI31G1064 Tripterygium wilfordii HOM05D000063 ORTHO05D008022 6.2e-49 197.6 129 65.9
CAN.G1080.2 Capsicum annuum HOM05D000063 ORTHO05D008022 8.1e-49 197.2 127 69.3
CAN.G1080.3 Capsicum annuum HOM05D000063 ORTHO05D008022 8.1e-49 197.2 127 69.3
CiPaw.01G218400 Carya illinoinensis HOM05D000063 ORTHO05D008022 8.1e-49 197.2 126 68.3
FvH4_2g04140 Fragaria vesca HOM05D000063 ORTHO05D008022 8.1e-49 197.2 125 70.4
FAN24G2783 Fragaria x ananassa HOM05D000063 ORTHO05D008022 8.1e-49 197.2 125 70.4
SalBow6G0699 Salvia bowleyana HOM05D000063 ORTHO05D008022 1.4e-48 196.4 132 63.6
Sopen03g041180 Solanum pennellii HOM05D000063 ORTHO05D008022 1.8e-48 196.1 125 68.8
Duzib160G0054 Durio zibethinus HOM05D000063 ORTHO05D008022 4.0e-48 194.9 128 67.2
Lsat_1_v5_gn_4_92980 Lactuca sativa HOM05D000063 ORTHO05D008022 4.0e-48 194.9 131 61.8
Cc04_g01330 Coffea canephora HOM05D000063 ORTHO05D008022 1.5e-47 193.0 130 67.7
TPR.G36646 Trifolium pratense HOM05D000063 ORTHO05D008022 2.0e-47 192.6 133 66.2
ClCG09G000960 Citrullus lanatus HOM05D000063 ORTHO05D008022 3.4e-47 191.8 132 64.4
Haze_16034 Corylus avellana HOM05D000063 ORTHO05D008022 7.5e-47 190.7 130 66.2
Cfa003531 Carpinus fangiana HOM05D000063 ORTHO05D008022 9.8e-47 190.3 130 66.2
Oeu020348.1 Olea europaea HOM05D000063 ORTHO05D008022 2.9e-46 188.7 124 68.5
Rhsim08G0239300 Rhododendron simsii HOM05D000063 ORTHO05D008022 2.9e-46 188.7 125 67.2
TAR636G2728 Trochodendron aralioides HOM05D000063 ORTHO05D008022 2.9e-46 188.7 127 66.9
ECA232G0747 Erigeron canadensis HOM05D000063 ORTHO05D008022 8.3e-46 187.2 132 61.4
Medtr8g020840 Medicago truncatula HOM05D000063 ORTHO05D008022 1.1e-45 186.8 127 65.4
VMungo0331G0121 Vigna mungo HOM05D000063 ORTHO05D008022 1.1e-45 186.8 127 64.6
arahy.Tifrunner.gnm1.ann1.YX6J26 Arachis hypogaea HOM05D000063 ORTHO05D008022 1.9e-45 186.0 127 63.8
TAR636G1739 Trochodendron aralioides HOM05D000063 ORTHO05D008022 1.9e-45 186.0 125 68.0
Ca_23386_v3 Cicer arietinum L. HOM05D000063 ORTHO05D008022 3.2e-45 185.3 127 63.0
Migut.I01075 Erythranthe guttata HOM05D000063 ORTHO05D008022 3.2e-45 185.3 125 64.8
Aqoxy7G01039 Aquilegia oxysepala HOM05D000063 ORTHO05D008022 7.1e-45 184.1 134 61.2
FAN27G0956 Fragaria x ananassa HOM05D000063 ORTHO05D008022 7.1e-45 184.1 126 67.5
Glyma.16G008200 Glycine max HOM05D000063 ORTHO05D008022 7.1e-45 184.1 127 65.4
Phvul.010G129400 Phaseolus vulgaris HOM05D000063 ORTHO05D008022 7.1e-45 184.1 127 63.8
Sed0021714 Sechium edule HOM05D000063 ORTHO05D008022 7.1e-45 184.1 131 61.8
Glyma.07G039400 Glycine max HOM05D000063 ORTHO05D008022 9.2e-45 183.7 127 65.4
Lj3g0006340 Lotus japonicus HOM05D000063 ORTHO05D008022 2.7e-44 182.2 126 63.5
DCAR_016125 Daucus carota HOM05D000063 ORTHO05D008022 1.7e-43 179.5 128 62.5
Psat0s741g0280 Pisum sativum HOM05D000063 ORTHO05D008022 2.3e-43 179.1 131 61.1
CsaV3_7G034480 Cucumis sativus L. HOM05D000063 ORTHO05D008022 8.6e-43 177.2 133 60.2
MELO3C024355.2 Cucumis melo HOM05D000063 ORTHO05D008022 3.3e-42 175.3 133 60.2
Lalb_Chr25g0281441 Lupinus albus HOM05D000063 ORTHO05D008022 3.3e-42 175.3 127 60.6
HanXRQChr09g0276941 Helianthus annuus HOM05D000063 ORTHO05D008022 7.3e-42 174.1 130 58.5
Lsat_1_v5_gn_5_136120 Lactuca sativa HOM05D000063 ORTHO05D008022 7.3e-42 174.1 131 58.8
Eucgr.J02815 Eucalyptus grandis HOM05D000063 ORTHO05D008022 2.8e-41 172.2 132 61.4
ECA234G2979 Erigeron canadensis HOM05D000063 ORTHO05D008022 6.2e-41 171.0 125 60.0
THA.LOC104810367 Tarenaya hassleriana HOM05D000063 ORTHO05D008022 1.1e-40 170.2 124 59.7
PGR102G2451 Punica granatum HOM05D000063 ORTHO05D008022 1.4e-40 169.9 128 59.4
HanXRQChr12g0360291 Helianthus annuus HOM05D000063 ORTHO05D008022 1.5e-39 166.4 127 59.1
HanXRQChr12g0360321 Helianthus annuus HOM05D000063 ORTHO05D008022 1.5e-39 166.4 127 59.1
HanXRQChr12g0360341 Helianthus annuus HOM05D000063 ORTHO05D008022 1.5e-39 166.4 127 59.1
Dinv20435 Davidia involucrata HOM05D000063 ORTHO05D008022 5.8e-39 164.5 106 70.8
PSO063G7075 Papaver somniferum HOM05D000063 ORTHO05D008022 7.6e-39 164.1 125 56.0
AL3G25980 Arabidopsis lyrata HOM05D000063 ORTHO05D008022 1.3e-38 163.3 121 60.3
PSO421G0202 Papaver somniferum HOM05D000063 ORTHO05D008022 3.8e-38 161.8 125 55.2
Ciclev10027413m.g Citrus clementina HOM05D000063 ORTHO05D008022 8.4e-38 160.6 129 58.9
Aa31LG8G1230 Aethionema arabicum HOM05D000063 ORTHO05D008022 2.4e-37 159.1 124 56.5
Sp3g12280 Schrenkiella parvula HOM05D000063 ORTHO05D008022 2.4e-37 159.1 121 58.7
CiPaw.02G135600 Carya illinoinensis HOM05D000063 ORTHO05D008022 1.2e-36 156.8 130 57.7
Thhalv10020543m.g Eutrema salsugineum HOM05D000063 ORTHO05D008022 2.7e-36 155.6 120 59.2
AT3G13840 Arabidopsis thaliana HOM05D000063 ORTHO05D008022 3.5e-36 155.2 121 56.2
CARHR088840 Cardamine hirsuta HOM05D000063 ORTHO05D008022 3.9e-35 151.8 121 59.5
HanXRQChr10g0312611 Helianthus annuus HOM05D000063 ORTHO05D008022 6.6e-35 151.0 126 54.8
BcaB06g25409 Brassica carinata HOM05D000063 ORTHO05D008022 1.5e-34 149.8 120 58.3
A05p35400 Brassica napus HOM05D000063 ORTHO05D008022 1.2e-33 146.7 116 58.6
BraA05t22350Z Brassica rapa HOM05D000063 ORTHO05D008022 1.2e-33 146.7 116 58.6
BcaC05g29128 Brassica carinata HOM05D000063 ORTHO05D008022 2.1e-33 146.0 116 58.6
C05p53620 Brassica napus HOM05D000063 ORTHO05D008022 2.1e-33 146.0 116 58.6
BolC5t34036H Brassica oleracea HOM05D000063 ORTHO05D008022 2.1e-33 146.0 116 58.6
Actinidia32188 Actinidia chinensis HOM05D000063 ORTHO05D008022 2.8e-33 145.6 105 62.9
Carub.0003s1361 Capsella rubella HOM05D000063 ORTHO05D008022 2.8e-33 145.6 121 55.4
Nitab4.5_0001199g0050 Nicotiana tabacum HOM05D000063 ORTHO05D008022 8.1e-25 117.5 75 69.3
Os03g0408600 Oryza sativa ssp. japonica HOM05D000063 ORTHO05D008022 1.2e-23 113.6 120 47.5
ATR0598G003 Amborella trichopoda HOM05D000063 ORTHO05D008022 1.5e-23 113.2 114 48.2
Zm00001eb019640 Zea mays HOM05D000063 ORTHO05D008022 4.5e-23 111.7 117 47.0
Zm00001eb392980 Zea mays HOM05D000063 ORTHO05D008022 5.8e-23 111.3 118 45.8
HPP92_005877 Vanilla planifolia HOM05D000063 ORTHO05D008022 1.1e-21 107.1 112 48.2
SMO118G0473 Selaginella moellendorffii HOM05D000063 ORTHO05D008022 9.6e-18 94.0 125 38.4
AagrBONN_evm.TU.Sc2ySwM_228.1691 Anthoceros agrestis HOM05D000063 ORTHO05D008022 1.4e-16 90.1 123 35.0
Mapoly0194s0011 Marchantia polymorpha HOM05D000063 ORTHO05D008022 6.9e-16 87.8 124 39.5
arahy.Tifrunner.gnm1.ann1.PLG903 Arachis hypogaea HOM05D000063 ORTHO05D008022 2.6e-15 85.9 54 68.5
Cfa010559 Carpinus fangiana HOM05D000063 ORTHO05D008022 3.2e-13 79.0 63 58.7
C08p25010 Brassica napus HOM05D000063 ORTHO05D003313 1.4e-08 63.5 123 31.7
BolC8t50120H Brassica oleracea HOM05D000063 ORTHO05D003313 1.4e-08 63.5 123 31.7
BcaB01g00649 Brassica carinata HOM05D000063 ORTHO05D003313 3.1e-08 62.4 123 30.9
BraA09t39776Z Brassica rapa HOM05D000063 ORTHO05D003313 4.0e-08 62.0 123 30.9
BcaC07g39460 Brassica carinata HOM05D000063 ORTHO05D003313 5.3e-08 61.6 123 30.9
MSTRG.15351 Avicennia marina HOM05D000063 ORTHO05D002792 6.9e-08 61.2 124 27.4
unitig_0.g504 Utricularia gibba HOM05D000063 ORTHO05D002792 6.9e-08 61.2 124 27.4
A09p43100 Brassica napus HOM05D000063 ORTHO05D003313 1.2e-07 60.5 123 30.9
CARHR088610 Cardamine hirsuta HOM05D000063 ORTHO05D008022 2.0e-07 59.7 52 51.9
SEGI_30346 Sequoiadendron giganteum HOM05D000063 ORTHO05D002792 2.6e-07 59.3 124 29.8
Zm00001eb108250 Zea mays HOM05D000063 ORTHO05D003313 4.5e-07 58.5 124 32.3
Zm00001eb326210 Zea mays HOM05D000063 ORTHO05D003313 3.8e-06 55.5 112 33.0
CDE07G0887 Ceratophyllum demersum HOM05D000063 ORTHO05D002792 8.4e-06 54.3 120 26.7


User provided reference genes

Program Settings