Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 2.5e-67 260.8 126 100.0
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.9e-33 146.4 125 62.4
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.2e-32 145.6 125 60.0
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 5.8e-32 143.3 128 61.7
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.9e-31 141.0 128 60.9
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.5e-27 128.6 126 56.3
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.9e-27 128.3 126 54.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 4.3e-27 127.1 126 55.6
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 4.3e-27 127.1 126 53.2
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.6e-26 125.2 129 54.3
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 2.8e-26 124.4 127 55.1
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.8e-26 124.4 125 52.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 8.2e-26 122.9 126 51.6
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 4.1e-25 120.6 126 53.2
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 5.3e-25 120.2 126 52.4
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 6.9e-25 119.8 125 51.2
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 9.0e-25 119.4 128 51.6
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 2.6e-24 117.9 129 51.2
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.6e-24 117.9 126 52.4
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 3.4e-24 117.5 119 51.3
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 4.5e-24 117.1 125 52.8
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 7.6e-24 116.3 119 51.3
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 7.6e-24 116.3 126 49.2
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.0e-23 115.9 119 52.1
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.0e-23 115.9 129 51.2
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.3e-23 115.5 126 49.2
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.3e-23 115.5 126 53.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.7e-23 115.2 126 48.4
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.7e-23 115.2 126 48.4
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.7e-23 115.2 127 53.5
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 2.2e-23 114.8 125 51.2
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.2e-23 114.8 118 50.0
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.9e-23 114.4 123 49.6
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 5.0e-23 113.6 119 52.1
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 6.5e-23 113.2 126 48.4
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 6.5e-23 113.2 127 50.4
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 6.5e-23 113.2 129 50.4
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 1.1e-22 112.5 129 50.4
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.4e-22 112.1 125 49.6
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.4e-22 112.1 125 49.6
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.4e-22 112.1 126 50.8
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.9e-22 111.7 119 51.3
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.9e-22 111.7 125 46.4
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.9e-22 111.7 126 47.6
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.5e-22 111.3 126 48.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 135 48.1
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 4.2e-22 110.5 121 47.1
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 4.2e-22 110.5 121 47.1
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 5.5e-22 110.2 126 48.4
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 9.3e-22 109.4 125 46.4
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 9.3e-22 109.4 125 48.8
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.2e-21 109.0 131 46.6
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 1.2e-21 109.0 125 48.0
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.2e-21 109.0 128 46.1
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 4.6e-21 107.1 127 48.8
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 6.1e-21 106.7 127 48.8
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 6.1e-21 106.7 128 46.9
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 6.1e-21 106.7 122 45.9
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 7.9e-21 106.3 126 49.2
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 7.9e-21 106.3 126 49.2
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 1.0e-20 105.9 126 49.2
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.0e-20 105.9 126 49.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.3e-20 105.5 130 46.2
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.8e-20 105.1 127 48.0
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.8e-20 105.1 126 46.0
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 2.3e-20 104.8 128 46.1
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 5.1e-20 103.6 128 46.9
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 6.7e-20 103.2 128 49.2
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 6.7e-20 103.2 119 47.9
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 8.7e-20 102.8 128 46.9
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 1.5e-19 102.1 129 45.7
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 2.5e-19 101.3 64 67.2
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 2.5e-19 101.3 124 45.2
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.3e-19 100.9 125 46.4
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 4.3e-19 100.5 126 46.8
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 7.4e-19 99.8 122 47.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 8.2e-18 96.3 121 45.5
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 1.8e-17 95.1 127 45.7
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.2e-16 92.4 63 60.3
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.5e-16 92.0 121 43.0
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 2.0e-16 91.7 129 41.9
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 3.4e-16 90.9 123 43.1
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.2e-15 88.2 65 55.4
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.1e-14 85.9 109 42.2
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 5.5e-14 83.6 139 42.4
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 9.4e-14 82.8 123 44.7
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.6e-13 80.5 126 38.9
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.1e-13 80.1 141 39.7
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 7.9e-13 79.7 126 38.9
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.3e-12 78.2 136 39.7
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 3.9e-12 77.4 139 41.0
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 5.1e-12 77.0 138 42.0
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 8.8e-12 76.3 134 42.5
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 9.7e-11 72.8 136 41.2
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.8e-10 71.2 138 39.1
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 6.3e-10 70.1 131 36.6
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 6.3e-10 70.1 131 36.6
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.1e-09 67.8 130 37.7
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.5e-08 65.5 126 36.5
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 2.0e-08 65.1 43 62.8
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.0e-08 65.1 126 36.5
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 4.5e-08 63.9 39 79.5
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.9e-06 58.5 37 70.3
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 2.5e-06 58.2 127 33.9
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 5.5e-06 57.0 87 37.9


User provided reference genes

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