Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.1e-255 885.2 444 100.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.4e-166 589.3 447 69.1
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.6e-165 585.9 451 68.5
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.2e-162 577.0 447 67.6
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.0e-161 573.9 453 68.0
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 6.7e-161 571.2 446 66.4
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 6.7e-161 571.2 445 67.2
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 5.7e-160 568.2 447 66.4
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 5.7e-160 568.2 445 67.2
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 7.5e-160 567.8 452 65.5
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.7e-159 566.6 445 66.7
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 8.3e-159 564.3 449 64.8
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.1e-158 563.9 447 65.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 1.4e-158 563.5 445 66.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.4e-158 563.5 445 67.0
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 3.1e-158 562.4 447 65.5
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.1e-158 562.4 449 64.1
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 7.0e-158 561.2 435 68.0
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 7.0e-158 561.2 452 65.9
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 9.1e-158 560.8 448 64.3
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.6e-157 560.1 443 65.5
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 2.0e-157 559.7 456 65.1
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 1.3e-156 557.0 443 65.2
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.2e-156 556.2 447 64.0
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 2.2e-156 556.2 447 64.7
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 2.2e-156 556.2 447 64.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.5e-155 552.7 447 63.8
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 2.5e-155 552.7 442 64.9
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 3.2e-155 552.4 452 63.7
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 5.5e-155 551.6 436 65.8
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 5.5e-155 551.6 448 64.5
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 7.2e-155 551.2 450 64.0
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 9.4e-155 550.8 448 63.4
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 9.4e-155 550.8 444 64.2
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 9.4e-155 550.8 464 61.9
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 2.1e-154 549.7 448 64.3
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 2.1e-154 549.7 447 63.8
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.1e-154 549.7 449 63.3
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.1e-154 549.7 448 63.2
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.1e-154 549.7 447 63.3
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 3.6e-154 548.9 440 65.9
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.6e-154 548.9 447 65.5
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 4.7e-154 548.5 448 64.1
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 5.2e-153 545.0 442 64.7
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 5.2e-153 545.0 447 63.1
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.5e-152 543.5 446 62.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 3.4e-152 542.3 440 65.2
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 7.5e-152 541.2 443 63.4
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 9.8e-152 540.8 449 63.3
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.7e-151 540.0 436 64.0
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 2.8e-151 539.3 445 64.3
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.8e-151 538.5 443 64.3
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.4e-150 537.0 443 63.0
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 3.1e-150 535.8 437 64.3
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 5.4e-150 535.0 406 70.0
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.7e-149 532.7 467 62.3
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.0e-148 530.8 445 63.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.0e-148 530.8 443 61.9
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.3e-148 529.6 449 62.1
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 2.3e-148 529.6 445 64.3
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.1e-147 527.3 449 62.1
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.6e-146 522.3 449 61.2
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 4.7e-146 521.9 447 63.3
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 4.7e-146 521.9 447 63.3
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 6.1e-146 521.5 447 62.0
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 3.0e-145 519.2 436 62.4
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.6e-144 516.2 458 60.0
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 7.0e-142 508.1 442 60.0
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 5.9e-141 505.0 475 57.5
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 8.6e-140 501.1 446 59.2
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.1e-139 500.7 430 61.2
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 8.0e-138 494.6 431 60.6
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 4.4e-136 488.8 321 75.4
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 3.7e-135 485.7 448 58.7
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 4.9e-135 485.3 443 58.2
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.4e-134 483.8 446 55.8
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 3.2e-134 482.6 447 56.4
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.0e-133 479.9 459 57.5
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.6e-133 478.8 444 56.3
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.7e-132 476.9 447 55.3
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.7e-132 476.9 447 55.3
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.0e-132 476.1 349 67.6
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 6.6e-132 474.9 447 55.0
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 1.5e-131 473.8 324 74.4
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.5e-131 473.8 444 56.5
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.9e-131 473.4 334 69.8
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 2.5e-131 473.0 447 54.8
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 3.3e-131 472.6 447 54.8
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.2e-130 470.7 444 55.4
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 2.1e-130 469.9 350 66.9
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.3e-129 466.5 444 54.1
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.0e-129 465.7 388 62.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 1.2e-128 464.2 444 53.6
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 2.3e-124 449.9 415 57.3
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.5e-123 446.4 326 68.7
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 7.5e-120 434.9 512 47.3
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.3e-111 407.5 441 53.7
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.8e-111 406.0 387 52.5
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.4e-110 403.3 294 69.7
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 3.2e-110 402.9 449 49.9
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 4.6e-109 399.1 315 63.2
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.6e-98 364.0 325 56.6
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 6.9e-97 358.6 315 61.6
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 4.9e-95 352.4 284 65.1
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.9e-94 350.5 381 50.4
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.1e-89 334.7 313 58.5
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.8e-89 334.0 397 47.9
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 3.4e-88 329.7 326 57.4
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 4.3e-83 312.8 327 55.4
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.3e-82 311.2 326 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.2e-80 304.7 342 47.7
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 3.8e-79 299.7 300 53.3
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.0e-76 291.6 337 49.0
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.3e-76 291.2 246 63.8
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 8.7e-76 288.5 246 58.1
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.3e-63 248.1 269 50.9
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 8.5e-63 245.4 158 81.0
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 8.5e-63 245.4 264 50.0
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 2.0e-59 234.2 197 59.4
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.2e-48 198.4 159 64.8
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.6e-48 198.0 137 73.0
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.5e-48 196.4 234 47.4
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 4.1e-41 173.3 151 67.5
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.9e-38 164.5 194 52.6
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 6.8e-36 156.0 122 59.0
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 2.6e-35 154.1 128 57.0
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.3e-30 137.1 313 31.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 2.8e-21 107.5 199 37.2
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.5e-14 84.3 92 52.2
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 4.9e-10 70.1 58 58.6


User provided reference genes

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