Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A230T38 Lonicera japonica HOM05D001292 ORTHO05D026434 8.2e-177 624.0 413 100.0
Dinv15996 Davidia involucrata HOM05D001292 ORTHO05D001202 8.8e-38 162.2 265 43.4
CSS0029667 Camellia sinensis var. sinensis HOM05D001292 ORTHO05D026434 8.8e-30 135.6 267 40.4
TAR625G0946 Trochodendron aralioides HOM05D001292 ORTHO05D001202 1.2e-15 88.6 293 29.7
MBI07_g34624_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 3.0e-14 84.0 285 32.6
PGSC0003DMG400033572 Solanum tuberosum HOM05D001292 ORTHO05D001202 1.5e-13 81.6 268 32.8
Nn1g05565 Nelumbo nucifera HOM05D001292 ORTHO05D001202 2.8e-12 77.4 277 31.4
Cc02_g20940 Coffea canephora HOM05D001292 ORTHO05D001202 6.3e-12 76.3 247 30.0
Sopen01g048280 Solanum pennellii HOM05D001292 ORTHO05D001202 8.3e-12 75.9 268 32.8
Gorai.012G143900 Gossypium raimondii HOM05D001292 ORTHO05D001202 1.8e-11 74.7 293 31.7
TWI56G0043 Tripterygium wilfordii HOM05D001292 ORTHO05D001202 2.4e-11 74.3 264 30.3
Nitab4.5_0000706g0010 Nicotiana tabacum HOM05D001292 ORTHO05D001202 4.1e-11 73.6 276 31.5
Nn5g29887 Nelumbo nucifera HOM05D001292 ORTHO05D001202 1.6e-10 71.6 294 28.6
Potri.005G155600 Populus trichocarpa HOM05D001292 ORTHO05D001202 2.0e-10 71.2 240 29.2
DCAR_021913 Daucus carota HOM05D001292 ORTHO05D026434 1.0e-09 68.9 269 32.7
Dinv44858 Davidia involucrata HOM05D001292 ORTHO05D001202 1.7e-09 68.2 162 32.7
TWI12G0821 Tripterygium wilfordii HOM05D001292 ORTHO05D001202 1.7e-09 68.2 293 28.0
Peaxi162Scf00299g00720 Petunia axillaris HOM05D001292 ORTHO05D001202 2.3e-09 67.8 288 30.2
Actinidia01160 Actinidia chinensis HOM05D001292 ORTHO05D001202 8.6e-09 65.9 212 34.0
Aqoxy6G00877 Aquilegia oxysepala HOM05D001292 ORTHO05D001202 1.5e-08 65.1 299 30.1
Cpa.g.sc21.12 Carica papaya HOM05D001292 ORTHO05D001202 1.5e-08 65.1 116 38.8
Lsat_1_v5_gn_5_109800 Lactuca sativa HOM05D001292 ORTHO05D001202 7.3e-08 62.8 171 32.7
Actinidia00305 Actinidia chinensis HOM05D001292 ORTHO05D026434 9.5e-08 62.4 135 34.1
Potri.007G115400 Populus trichocarpa HOM05D001292 ORTHO05D001202 9.5e-08 62.4 283 27.9
Potri.017G044000 Populus trichocarpa HOM05D001292 ORTHO05D001202 9.5e-08 62.4 149 32.2
CAN.G523.11 Capsicum annuum HOM05D001292 ORTHO05D001202 1.2e-07 62.0 266 29.7
Duzib248G0868 Durio zibethinus HOM05D001292 ORTHO05D001202 1.6e-07 61.6 281 29.5
Sabra07G0094200 Salix brachista HOM05D001292 ORTHO05D001202 1.6e-07 61.6 273 27.8
MBI16_g27584_MAGBIO Magnolia biondii HOM05D001292 ORTHO05D001202 2.1e-07 61.2 288 28.1
Duzib052G0393 Durio zibethinus HOM05D001292 ORTHO05D001202 4.7e-07 60.1 273 30.4
Sabra02G0083000 Salix brachista HOM05D001292 ORTHO05D001202 6.1e-07 59.7 248 25.8
Sabra17G0029900 Salix brachista HOM05D001292 ORTHO05D001202 6.1e-07 59.7 264 24.6
Thecc.08G070600 Theobroma cacao HOM05D001292 ORTHO05D001202 6.1e-07 59.7 256 27.3
Lalb_Chr18g0060411 Lupinus albus HOM05D001292 ORTHO05D001202 1.0e-06 58.9 157 34.4
Manes.10G098700 Manihot esculenta HOM05D001292 ORTHO05D001202 2.3e-06 57.8 252 27.8
Potri.002G105700 Populus trichocarpa HOM05D001292 ORTHO05D001202 2.3e-06 57.8 248 25.4
Prupe.6G149300 Prunus persica HOM05D001292 ORTHO05D001202 4.0e-06 57.0 246 27.2
FvH4_2g11700 Fragaria vesca HOM05D001292 ORTHO05D001202 5.2e-06 56.6 289 30.8
ECA234G2749 Erigeron canadensis HOM05D001292 ORTHO05D001202 6.8e-06 56.2 265 29.4
HanXRQChr10g0289961 Helianthus annuus HOM05D001292 ORTHO05D001202 6.8e-06 56.2 135 33.3


User provided reference genes

Program Settings