Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A20T31 Lonicera japonica HOM05D000989 ORTHO05D006109 2.7e-109 398.7 201 100.0
Dinv20318 Davidia involucrata HOM05D000989 ORTHO05D006109 2.9e-50 202.6 178 60.7
Hma1.2p1_0141F.1_g064000 Hydrangea macrophylla HOM05D000989 ORTHO05D006109 1.1e-49 200.7 162 66.0
Actinidia38817 Actinidia chinensis HOM05D000989 ORTHO05D006109 1.2e-48 197.2 178 60.7
GSVIVG01029461001 Vitis vinifera HOM05D000989 ORTHO05D006109 1.6e-48 196.8 167 65.9
CSS0036335 Camellia sinensis var. sinensis HOM05D000989 ORTHO05D006109 5.0e-47 191.8 168 66.7
QL05p085514 Quercus lobata HOM05D000989 ORTHO05D006109 1.1e-46 190.7 160 66.9
Haze_16237 Corylus avellana HOM05D000989 ORTHO05D006109 1.2e-45 187.2 152 64.5
Ciclev10028538m.g Citrus clementina HOM05D000989 ORTHO05D006109 2.8e-45 186.0 153 63.4
Cfa023514 Carpinus fangiana HOM05D000989 ORTHO05D006109 3.6e-45 185.7 169 58.6
Prupe.3G027000 Prunus persica HOM05D000989 ORTHO05D006109 3.6e-45 185.7 182 57.1
Atru.chr3.4104 Acer truncatum HOM05D000989 ORTHO05D006109 8.0e-45 184.5 181 58.0
FvH4_6g36480 Fragaria vesca HOM05D000989 ORTHO05D006109 8.0e-45 184.5 166 61.4
FAN14G2118 Fragaria x ananassa HOM05D000989 ORTHO05D006109 8.0e-45 184.5 166 61.4
HanXRQChr09g0277441 Helianthus annuus HOM05D000989 ORTHO05D006109 1.1e-44 184.1 168 57.1
Aqoxy7G02659 Aquilegia oxysepala HOM05D000989 ORTHO05D006109 1.8e-44 183.3 177 57.6
Rhsim08G0251900 Rhododendron simsii HOM05D000989 ORTHO05D006109 1.8e-44 183.3 161 59.0
Sabra14G0002700 Salix brachista HOM05D000989 ORTHO05D006109 1.8e-44 183.3 156 60.9
Thecc.06G052000 Theobroma cacao HOM05D000989 ORTHO05D006109 1.8e-44 183.3 180 58.9
Manes.14G000100 Manihot esculenta HOM05D000989 ORTHO05D006109 3.1e-44 182.6 156 60.3
RcHm_v2.0_Chr2g0148611 Rosa chinensis HOM05D000989 ORTHO05D006109 3.1e-44 182.6 170 60.6
Sabra14G0003500 Salix brachista HOM05D000989 ORTHO05D006109 3.1e-44 182.6 156 60.3
Potri.014G001100 Populus trichocarpa HOM05D000989 ORTHO05D006109 6.8e-44 181.4 156 60.9
COL.COLO4_19515 Corchorus olitorius HOM05D000989 ORTHO05D006109 1.2e-43 180.6 166 60.8
PSO063G2540 Papaver somniferum HOM05D000989 ORTHO05D006109 1.2e-43 180.6 171 57.3
Sabra07G0002000 Salix brachista HOM05D000989 ORTHO05D006109 2.6e-43 179.5 149 62.4
Duzib192G0753 Durio zibethinus HOM05D000989 ORTHO05D006109 3.4e-43 179.1 166 60.8
PSO170G5971 Papaver somniferum HOM05D000989 ORTHO05D006109 3.4e-43 179.1 171 57.3
FAN02G4168 Fragaria x ananassa HOM05D000989 ORTHO05D006109 2.2e-42 176.4 182 56.6
THA.LOC104815704 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 2.9e-42 176.0 165 58.2
CiPaw.01G093100 Carya illinoinensis HOM05D000989 ORTHO05D006109 3.7e-42 175.6 153 61.4
MD09G1168600 Malus domestica HOM05D000989 ORTHO05D006109 6.4e-42 174.9 182 53.3
Lj3g0006607 Lotus japonicus HOM05D000989 ORTHO05D006109 1.1e-41 174.1 156 57.7
FAN05G4662 Fragaria x ananassa HOM05D000989 ORTHO05D006109 1.9e-41 173.3 180 56.7
SGA_v2.0_scaffold122G33258 Striga asiatica HOM05D000989 ORTHO05D006109 2.4e-41 172.9 157 60.5
Nn8g41214 Nelumbo nucifera HOM05D000989 ORTHO05D006109 3.2e-41 172.6 187 53.5
Gohir.D05G116600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 4.1e-41 172.2 176 55.7
Gorai.009G120600 Gossypium raimondii HOM05D000989 ORTHO05D006109 4.1e-41 172.2 176 55.7
MBI16_g00831_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 7.0e-41 171.4 162 57.4
Lsat_1_v5_gn_4_106160 Lactuca sativa HOM05D000989 ORTHO05D006109 9.2e-41 171.0 148 58.8
EL10Ac7g18115 Beta vulgaris HOM05D000989 ORTHO05D006109 1.2e-40 170.6 153 58.2
Eucgr.F04053 Eucalyptus grandis HOM05D000989 ORTHO05D006109 1.2e-40 170.6 156 60.3
Gohir.A05G116032 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.2e-40 170.6 176 55.7
Ah.08g217990 Amaranthus hybridus HOM05D000989 ORTHO05D006109 1.6e-40 170.2 163 54.0
AUR62001309 Chenopodium quinoa HOM05D000989 ORTHO05D006109 3.5e-40 169.1 149 59.7
CsaV3_3G020170 Cucumis sativus L. HOM05D000989 ORTHO05D006109 4.6e-40 168.7 175 56.0
Medtr4g005140 Medicago truncatula HOM05D000989 ORTHO05D006109 4.6e-40 168.7 154 57.8
FAN09G3581 Fragaria x ananassa HOM05D000989 ORTHO05D006109 6.0e-40 168.3 159 59.7
TWI12G0396 Tripterygium wilfordii HOM05D000989 ORTHO05D006109 6.0e-40 168.3 177 49.7
TAR383G0471 Trochodendron aralioides HOM05D000989 ORTHO05D006109 6.0e-40 168.3 183 55.7
Potri.007G002700 Populus trichocarpa HOM05D000989 ORTHO05D006109 1.0e-39 167.5 166 56.0
Sed0020073 Sechium edule HOM05D000989 ORTHO05D006109 1.0e-39 167.5 176 56.8
Solyc03g124060.3 Solanum lycopersicum HOM05D000989 ORTHO05D006109 1.0e-39 167.5 171 57.3
Aa31LG10G220 Aethionema arabicum HOM05D000989 ORTHO05D006109 1.7e-39 166.8 174 54.0
BraSC56t46391Z Brassica rapa HOM05D000989 ORTHO05D006109 1.7e-39 166.8 187 51.9
MELO3C023731.2 Cucumis melo HOM05D000989 ORTHO05D006109 1.7e-39 166.8 175 56.6
MD17G1158100 Malus domestica HOM05D000989 ORTHO05D006109 1.7e-39 166.8 177 52.5
SGA_v2.0_scaffold71G24021 Striga asiatica HOM05D000989 ORTHO05D006109 1.7e-39 166.8 153 58.8
MSTRG.11572 Avicennia marina HOM05D000989 ORTHO05D006109 2.3e-39 166.4 160 58.1
Ca_03771_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 2.3e-39 166.4 152 57.9
Psat7g264760 Pisum sativum HOM05D000570 ORTHO05D001174 2.3e-39 166.4 163 54.6
CARHR045700 Cardamine hirsuta HOM05D000989 ORTHO05D006109 3.0e-39 166.0 165 55.2
ClCG05G012260 Citrullus lanatus HOM05D000989 ORTHO05D006109 3.0e-39 166.0 158 60.1
Peaxi162Scf00684g00414 Petunia axillaris HOM05D000989 ORTHO05D006109 3.0e-39 166.0 164 57.9
Sopen03g041790 Solanum pennellii HOM05D000989 ORTHO05D006109 3.0e-39 166.0 171 56.7
Duzib235G1336 Durio zibethinus HOM05D000989 ORTHO05D006109 5.1e-39 165.2 153 59.5
arahy.Tifrunner.gnm1.ann1.ECX43N Arachis hypogaea HOM05D000989 ORTHO05D006109 6.6e-39 164.9 181 50.3
SalBow6G4719 Salvia bowleyana HOM05D000989 ORTHO05D006109 6.6e-39 164.9 158 58.2
Hund05662 Selenicereus undatus HOM05D000989 ORTHO05D006109 6.6e-39 164.9 159 56.6
BolC6t36168H Brassica oleracea HOM05D000989 ORTHO05D006109 8.6e-39 164.5 182 51.6
CANSAT01G0659 Cannabis sativa HOM05D000989 ORTHO05D006109 8.6e-39 164.5 172 53.5
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 8.6e-39 164.5 183 50.3
Migut.I01212 Erythranthe guttata HOM05D000989 ORTHO05D006109 8.6e-39 164.5 165 55.2
Thhalv10011546m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 8.6e-39 164.5 177 52.5
Glyma.08G226000 Glycine max HOM05D000989 ORTHO05D006109 8.6e-39 164.5 163 57.7
Sp1g41570 Schrenkiella parvula HOM05D000989 ORTHO05D006109 8.6e-39 164.5 188 51.1
Carub.0003s1239 Capsella rubella HOM05D000989 ORTHO05D006109 1.1e-38 164.1 185 50.8
Nitab4.5_0000499g0090 Nicotiana tabacum HOM05D000989 ORTHO05D006109 1.5e-38 163.7 151 57.6
CAN.G790.1 Capsicum annuum HOM05D000989 ORTHO05D006109 3.3e-38 162.5 169 53.8
ECA232G1648 Erigeron canadensis HOM05D000989 ORTHO05D006109 3.3e-38 162.5 162 54.3
CARHR087630 Cardamine hirsuta HOM05D000989 ORTHO05D006109 4.3e-38 162.2 190 51.6
AUR62025691 Chenopodium quinoa HOM05D000989 ORTHO05D006109 5.6e-38 161.8 174 52.9
Glyma.07G001000 Glycine max HOM05D000989 ORTHO05D006109 5.6e-38 161.8 158 57.0
Phvul.010G165300 Phaseolus vulgaris HOM05D000989 ORTHO05D006109 7.3e-38 161.4 162 56.8
BcaC08g43665 Brassica carinata HOM05D000989 ORTHO05D006109 9.5e-38 161.0 187 52.4
C06p10850 Brassica napus HOM05D000989 ORTHO05D006109 2.1e-37 159.8 182 53.3
AL1G64210 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 2.8e-37 159.5 158 56.3
BcaB07g33179 Brassica carinata HOM05D000989 ORTHO05D006109 2.8e-37 159.5 184 51.6
TPR.G38747 Trifolium pratense HOM05D000989 ORTHO05D006109 2.8e-37 159.5 153 54.2
AL3G24790 Arabidopsis lyrata HOM05D000989 ORTHO05D006109 3.6e-37 159.1 185 49.7
VMungo0331G0118 Vigna mungo HOM05D000989 ORTHO05D006109 3.6e-37 159.1 163 54.6
ATR0626G329 Amborella trichopoda HOM05D000989 ORTHO05D006109 1.8e-36 156.8 178 51.7
PGR102G0324 Punica granatum HOM05D000989 ORTHO05D006109 1.8e-36 156.8 161 54.7
THA.LOC104822743 Tarenaya hassleriana HOM05D000989 ORTHO05D006109 1.8e-36 156.8 181 48.6
AT1G55960 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 2.3e-36 156.4 169 52.1
AT3G13062 Arabidopsis thaliana HOM05D000989 ORTHO05D006109 3.1e-36 156.0 173 50.9
Thhalv10020844m.g Eutrema salsugineum HOM05D000989 ORTHO05D006109 3.1e-36 156.0 184 50.5
Carub.0001s4457 Capsella rubella HOM05D000989 ORTHO05D006109 5.2e-36 155.2 169 53.3
BraA01t04080Z Brassica rapa HOM05D000570 ORTHO05D006109 1.2e-35 154.1 191 48.2
Gohir.A03G088600 Gossypium hirsutum HOM05D000989 ORTHO05D006109 1.2e-35 154.1 166 53.0
Gorai.005G119500 Gossypium raimondii HOM05D000989 ORTHO05D006109 1.2e-35 154.1 166 53.0
A01p40460 Brassica napus HOM05D000989 ORTHO05D006109 2.6e-35 152.9 186 47.8
C03p46110 Brassica napus HOM05D000989 ORTHO05D006109 2.6e-35 152.9 178 50.0
BolC3t16883H Brassica oleracea HOM05D000989 ORTHO05D006109 2.6e-35 152.9 178 50.0
Gohir.D02G105300 Gossypium hirsutum HOM05D000989 ORTHO05D006109 4.4e-35 152.1 166 53.0
Sc15g0001170 Simmondsia chinensis HOM05D000989 ORTHO05D006109 4.4e-35 152.1 166 53.0
Sp3g11220 Schrenkiella parvula HOM05D000989 ORTHO05D006109 7.5e-35 151.4 172 51.7
PGSC0003DMG400009197 Solanum tuberosum HOM05D000989 ORTHO05D006109 2.9e-34 149.4 170 53.5
TAR626G0219 Trochodendron aralioides HOM05D000989 ORTHO05D006109 4.9e-34 148.7 142 56.3
TAR626G0832 Trochodendron aralioides HOM05D000989 ORTHO05D006109 4.9e-34 148.7 142 56.3
C01p52050 Brassica napus HOM05D000989 ORTHO05D006109 6.4e-34 148.3 192 49.0
BraA03t12954Z Brassica rapa HOM05D000989 ORTHO05D006109 6.4e-34 148.3 178 48.9
BolC1t05148H Brassica oleracea HOM05D000989 ORTHO05D006109 1.4e-33 147.1 191 48.7
HPP92_018325 Vanilla planifolia HOM05D000989 ORTHO05D006109 1.4e-33 147.1 185 43.8
arahy.Tifrunner.gnm1.ann1.FCN3VB Arachis hypogaea HOM05D000989 ORTHO05D006109 4.1e-33 145.6 224 42.4
A03p38020 Brassica napus HOM05D000989 ORTHO05D006109 1.2e-32 144.1 173 48.0
CDE05G3314 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 1.2e-32 144.1 170 49.4
Nitab4.5_0004098g0010 Nicotiana tabacum HOM05D000989 ORTHO05D006109 2.1e-32 143.3 151 55.0
DCAR_007676 Daucus carota HOM05D000989 ORTHO05D006109 2.7e-32 142.9 140 55.7
vmacro18725 Vaccinium macrocarpon HOM05D000989 ORTHO05D006109 6.0e-32 141.7 258 40.3
Oeu035084.1 Olea europaea HOM05D000989 ORTHO05D006109 1.7e-31 140.2 140 57.1
CDE05G1780 Ceratophyllum demersum HOM05D000989 ORTHO05D006109 2.5e-30 136.3 168 48.2
Atru.chr3.4101 Acer truncatum HOM05D000989 ORTHO05D006109 3.3e-30 136.0 142 55.6
Nn5g26976 Nelumbo nucifera HOM05D000989 ORTHO05D006109 5.6e-30 135.2 146 54.1
BcaC01g04007 Brassica carinata HOM05D000989 ORTHO05D006109 6.2e-29 131.7 156 49.4
Zm00001eb082000 Zea mays HOM05D000989 ORTHO05D006109 1.2e-27 127.5 150 44.7
Os02g0468400 Oryza sativa ssp. japonica HOM05D000989 ORTHO05D006109 3.4e-27 125.9 160 41.2
Zm00001eb240920 Zea mays HOM05D000989 ORTHO05D006109 3.4e-27 125.9 150 44.0
Cc04_g00100 Coffea canephora HOM05D000989 ORTHO05D006109 1.3e-26 124.0 130 50.8
SEGI_20704 Sequoiadendron giganteum HOM05D000989 ORTHO05D006109 1.6e-24 117.1 153 43.1
RcHm_v2.0_Chr1g0356301 Rosa chinensis HOM05D000989 ORTHO05D006109 4.6e-24 115.5 86 69.8
Pp3c23_14010 Physcomitrium patens HOM05D000989 ORTHO05D006109 7.8e-24 114.8 151 42.4
Cpa.g.sc10.6 Carica papaya HOM05D000989 ORTHO05D006109 1.2e-21 107.5 85 63.5
Mapoly0020s0077 Marchantia polymorpha HOM05D000989 ORTHO05D006109 1.7e-18 97.1 166 33.7
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 3.2e-17 92.8 121 42.1
SMO364G0840 Selaginella moellendorffii HOM05D000989 ORTHO05D006109 1.2e-16 90.9 164 34.1
AagrBONN_evm.TU.Sc2ySwM_117.3861 Anthoceros agrestis HOM05D000989 ORTHO05D006109 2.7e-16 89.7 173 34.1
SGA_v2.0_scaffold71G24020 Striga asiatica HOM05D000011 ORTHO05D000018 3.1e-12 76.3 87 48.3
MBI11_g16498_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 1.4e-09 67.4 90 41.1
MBI15_g24506_MAGBIO Magnolia biondii HOM05D000989 ORTHO05D006109 2.4e-09 66.6 35 85.7
CBR_g32388 Chara braunii HOM05D000989 ORTHO05D001287 2.3e-07 60.1 114 35.1


User provided reference genes

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