Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 9.7e-283 976.1 474 100.0
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 2.6e-195 685.6 461 74.2
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.9e-186 655.6 464 69.6
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.8e-183 646.4 463 70.0
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.1e-182 643.7 466 69.7
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 1.8e-180 636.3 462 68.0
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.5e-179 633.3 465 68.0
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.9e-177 626.3 468 67.9
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 2.1e-176 622.9 461 66.6
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 5.1e-175 618.2 457 68.1
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.5e-174 616.7 491 65.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 3.3e-174 615.5 463 66.3
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 9.7e-174 614.0 462 67.7
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 6.3e-173 611.3 459 66.2
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.1e-172 610.5 463 65.7
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 5.3e-172 608.2 457 66.7
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.2e-171 607.1 463 68.3
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.5e-171 606.7 466 67.0
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.5e-171 605.1 459 66.2
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 7.7e-171 604.4 465 65.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.3e-170 603.6 460 65.7
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.3e-170 603.6 460 65.9
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 5.0e-170 601.7 459 64.5
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 6.5e-170 601.3 459 65.8
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.4e-169 600.1 466 66.1
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.2e-169 597.8 459 65.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.7e-168 595.9 460 66.5
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.4e-167 593.6 461 66.6
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.3e-167 592.8 461 65.7
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 8.8e-167 590.9 461 65.3
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.1e-166 590.5 463 64.6
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 4.4e-166 588.6 461 65.5
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 9.7e-166 587.4 463 64.8
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 9.7e-166 587.4 461 65.3
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 3.7e-165 585.5 464 64.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 6.3e-165 584.7 408 70.3
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.4e-164 583.6 428 67.8
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 7.0e-164 581.3 482 62.0
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.6e-163 580.1 468 64.5
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 5.9e-163 578.2 424 66.5
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 5.0e-162 575.1 465 63.7
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 8.5e-162 574.3 465 63.9
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.1e-161 573.9 453 65.8
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.5e-161 572.8 429 66.2
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 4.2e-161 572.0 498 62.2
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 7.2e-161 571.2 429 66.0
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.2e-160 570.5 431 65.9
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.7e-160 569.3 466 62.7
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 3.6e-160 568.9 465 62.2
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.8e-159 566.6 433 65.4
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 4.0e-159 565.5 463 62.9
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.0e-159 565.5 464 62.1
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 6.7e-159 564.7 461 62.5
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 6.7e-159 564.7 462 61.7
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 6.7e-159 564.7 434 65.7
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 6.7e-159 564.7 467 61.9
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 8.8e-159 564.3 465 64.7
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.5e-158 563.5 463 62.4
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 2.6e-158 562.8 509 60.1
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 4.4e-158 562.0 464 63.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 7.5e-158 561.2 461 62.0
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 2.8e-157 559.3 472 62.9
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 7.0e-156 554.7 477 61.0
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 7.7e-155 551.2 464 62.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.0e-154 550.8 461 62.9
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.5e-153 547.0 459 59.9
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 6.1e-152 541.6 468 59.2
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 6.1e-152 541.6 499 57.7
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 4.0e-151 538.9 468 61.3
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.7e-149 533.5 465 60.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 2.2e-149 533.1 463 59.8
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 4.8e-149 531.9 467 60.4
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 6.3e-149 531.6 464 60.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 6.3e-149 531.6 467 60.2
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.2e-147 527.3 462 61.0
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 3.5e-147 525.8 487 56.5
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 4.5e-147 525.4 466 59.9
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.5e-145 520.4 461 59.7
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.9e-145 520.0 496 56.0
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.5e-145 518.5 461 60.3
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.5e-145 518.5 461 60.3
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 7.2e-145 518.1 466 60.3
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.8e-144 516.2 471 56.9
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 2.8e-144 516.2 459 59.5
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 3.6e-144 515.8 462 58.7
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.8e-143 513.5 461 59.7
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.3e-143 513.1 469 57.8
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.0e-142 510.0 461 59.7
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 5.7e-142 508.4 445 58.2
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.7e-141 505.8 444 59.7
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 7.0e-140 501.5 467 59.1
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.9e-137 493.4 447 57.5
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.3e-133 480.7 408 61.5
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 5.6e-129 465.3 479 54.1
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.4e-127 460.7 318 70.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.1e-127 459.5 505 51.3
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.1e-127 459.5 505 51.3
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.5e-118 430.6 462 52.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 4.7e-112 409.1 462 48.5
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.3e-109 401.0 461 47.7
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 4.9e-109 399.1 464 48.5
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.9e-108 397.1 467 46.7
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 9.2e-108 394.8 378 55.6
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 4.3e-105 386.0 365 55.1
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 4.7e-104 382.5 319 62.7
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.6e-102 376.7 324 59.6
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 7.3e-97 358.6 316 60.8
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 3.4e-94 349.7 413 47.0
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 6.2e-88 328.9 295 57.3
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 2.2e-85 320.5 465 43.9
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.4e-63 248.1 152 78.3
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 5.3e-63 246.1 308 46.8
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 7.7e-62 242.3 359 38.4
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.2e-59 235.0 411 34.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.5e-44 184.9 833 24.7
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 2.9e-37 160.6 344 31.4
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.8e-37 160.2 95 76.8
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.1e-35 154.5 119 63.9
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.6e-27 128.3 139 50.4
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.7e-24 118.2 77 74.0
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 8.0e-11 72.8 60 61.7


User provided reference genes

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