Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 2095.5 1185 100.0
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1316.6 1270 63.0
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1292.3 1257 62.5
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1277.3 1235 63.0
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1275.8 1227 66.3
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1263.1 1264 60.8
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1248.0 1167 63.7
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1243.8 1259 60.8
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1221.5 1264 61.1
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1217.6 1255 61.0
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1214.5 918 74.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1203.3 1241 60.4
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1190.3 1254 59.6
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1190.3 1254 60.4
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1175.6 1246 60.4
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1165.6 1234 60.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1158.7 1255 59.2
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1155.2 1197 60.7
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1151.0 1255 59.0
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1144.4 1251 56.9
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1135.6 1243 58.2
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1125.9 1250 57.6
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1122.8 1223 56.7
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1117.4 1249 57.2
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1114.0 1246 60.0
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1112.8 1201 58.3
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1109.0 1223 57.4
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1105.1 1243 57.5
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1103.6 1235 57.2
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1103.6 1259 57.0
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1100.5 1255 59.0
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1097.8 1250 59.0
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1097.4 1255 59.0
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1097.0 1404 52.0
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1092.8 1257 58.8
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1092.4 1240 56.7
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1092.0 1252 56.0
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1091.6 1257 58.4
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1087.4 1252 56.0
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1086.6 1239 55.9
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1082.4 1196 56.4
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1081.6 1242 56.2
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1080.1 1243 56.2
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1079.3 1248 55.9
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1077.0 1242 56.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1077.0 1241 56.5
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1076.6 1251 55.0
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1075.1 1218 57.6
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 8.1e-312 1074.3 1040 63.3
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 4.1e-311 1071.6 1234 55.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 9.7e-311 1070.5 1246 57.9
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.7e-310 1068.1 925 67.6
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 2.3e-309 1065.8 1254 55.7
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 2.8e-307 1058.9 1252 54.4
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 4.1e-306 1055.0 1203 56.1
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 5.4e-306 1054.7 1253 56.1
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 7.8e-305 1050.8 1242 56.4
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 1.9e-303 1046.2 1250 54.7
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 1.2e-302 1043.5 1244 55.4
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 4.4e-300 1035.0 1246 54.6
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 4.4e-300 1035.0 1080 58.9
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 9.8e-300 1033.9 1240 53.8
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 9.8e-300 1033.9 819 72.2
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 2.2e-299 1032.7 1255 54.3
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 2.9e-299 1032.3 1248 54.9
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 1.1e-298 1030.4 1253 53.9
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 2.1e-294 1016.1 1258 53.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 7.5e-292 1007.7 1244 53.5
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 1.3e-288 996.9 1259 52.1
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 5.1e-288 995.0 1044 61.2
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 9.2e-282 974.2 1251 52.9
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 1.2e-276 957.2 1242 53.5
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 2.4e-274 949.5 1276 49.9
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 3.3e-255 885.9 1024 57.7
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.3e-254 884.0 1028 56.8
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 3.8e-243 845.9 1063 52.6
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.8e-230 803.1 1166 46.3
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.4e-221 774.2 1127 46.9
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 5.0e-219 765.8 1035 51.4
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 2.2e-190 670.6 776 57.1
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.8e-190 670.2 936 51.8
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 9.5e-186 655.2 947 47.1
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 4.9e-174 616.3 886 47.4
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 2.8e-169 600.5 854 46.3
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 3.2e-157 560.5 566 60.8
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.6e-100 370.9 692 41.3
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 3.6e-100 370.9 607 48.6
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 7.0e-96 356.7 786 36.8
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.8e-67 262.3 239 59.4
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 9.2e-64 250.0 226 59.3
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 6.0e-55 220.7 206 60.7
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 4.0e-51 208.0 245 51.0
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 6.2e-44 184.1 392 40.6
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.4e-40 172.2 166 60.2
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 7.1e-40 170.6 152 69.7
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.0e-38 166.8 274 43.8
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 6.6e-38 164.1 270 44.8
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.9e-37 162.5 171 55.0
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 4.4e-34 151.4 806 25.2
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-33 147.9 259 39.8
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-26 126.3 174 48.3
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.7e-25 122.9 248 33.9
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.9e-24 119.4 174 46.0
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 4.3e-21 108.2 115 53.0
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.3e-20 106.7 249 38.2
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 3.7e-20 105.1 291 28.5
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 6.0e-15 87.8 59 69.5
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 7.9e-15 87.4 161 37.9
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-14 86.3 61 57.4
Actinidia09210 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.4e-11 76.6 188 38.3
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 8.5e-09 67.4 69 53.6
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 1.0e-06 60.5 102 49.0


User provided reference genes

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