Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 1.8e-268 928.7 478 100.0
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 2.4e-132 476.5 488 57.0
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 3.2e-108 396.4 495 50.1
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.0e-98 363.2 494 49.0
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 1.8e-95 354.0 495 46.9
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 9.7e-89 331.6 496 45.8
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 1.7e-88 330.9 500 44.6
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 5.3e-87 325.9 496 44.2
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 1.3e-85 321.2 487 46.6
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 1.2e-83 314.7 562 41.6
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 2.3e-82 310.5 494 43.1
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 3.3e-81 306.6 495 44.6
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 3.3e-81 306.6 490 45.1
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 2.8e-80 303.5 497 44.9
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 6.3e-80 302.4 495 42.8
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 6.5e-77 292.4 495 44.2
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 8.5e-77 292.0 494 40.5
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 7.2e-76 288.9 492 42.1
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 1.2e-75 288.1 475 44.4
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 6.7e-74 282.3 471 44.6
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 1.2e-73 281.6 493 42.4
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 3.3e-73 280.0 501 39.7
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 9.7e-73 278.5 501 40.5
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 1.7e-72 277.7 495 39.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.2e-72 277.3 494 39.5
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 4.8e-72 276.2 495 39.0
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 6.3e-72 275.8 503 40.8
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.4e-71 273.9 495 38.8
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 1.6e-70 271.2 511 39.5
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 2.7e-70 270.4 508 39.6
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 2.2e-69 267.3 505 39.2
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 3.2e-68 263.5 503 41.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 9.4e-68 261.9 495 39.2
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 4.7e-67 259.6 495 40.2
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 3.0e-66 256.9 486 40.3
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 1.5e-65 254.6 486 38.5
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 5.7e-65 252.7 513 38.0
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 7.5e-65 252.3 498 38.2
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 3.7e-64 250.0 469 42.0
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 6.3e-64 249.2 496 40.3
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.8e-63 247.7 474 40.9
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 1.2e-62 245.0 503 37.4
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 1.6e-62 244.6 498 38.0
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.6e-62 244.6 492 37.8
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 1.3e-61 241.5 491 37.3
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 3.2e-60 236.9 497 37.4
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 7.2e-60 235.7 518 37.1
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 2.8e-59 233.8 599 33.4
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 8.0e-59 232.3 545 35.0
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 1.0e-58 231.9 549 35.7
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 2.3e-58 230.7 485 39.0
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 4.0e-58 229.9 548 37.2
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 2.0e-57 227.6 505 35.2
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 3.4e-57 226.9 495 36.2
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.3e-56 224.9 485 38.1
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 1.4e-55 221.5 476 38.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 2.4e-55 220.7 498 36.5
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 2.0e-54 217.6 480 36.0
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 3.5e-54 216.9 488 35.9
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 1.0e-53 215.3 497 35.8
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 5.0e-53 213.0 489 36.6
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 1.8e-50 204.5 440 35.9
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 1.2e-49 201.8 577 33.6
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 2.2e-48 197.6 574 31.5
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.4e-47 193.0 196 53.6
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 1.2e-46 191.8 467 34.9
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 5.9e-46 189.5 480 34.6
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 7.8e-46 189.1 509 32.8
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 7.8e-46 189.1 269 45.0
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 9.5e-44 182.2 533 30.8
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 3.6e-43 180.3 492 31.9
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 4.7e-43 179.9 524 34.2
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 1.2e-41 175.3 318 37.7
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 2.6e-41 174.1 183 55.2
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 8.6e-37 159.1 485 30.9
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 7.3e-36 156.0 571 31.0
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 3.6e-35 153.7 107 67.3
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 2.3e-34 151.0 159 54.7
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 2.0e-33 147.9 513 29.2
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.5e-25 121.7 129 47.3
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 1.7e-24 118.2 153 43.8
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 6.9e-18 96.3 70 67.1
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 4.4e-17 93.6 115 41.7
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 7.8e-14 82.8 75 57.3
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 5.3e-10 70.1 235 32.3
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.2e-06 58.9 74 39.2
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 2.1e-06 58.2 53 67.9


User provided reference genes

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