Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1557.3 1038 100.0
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1238.8 1042 84.7
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1214.1 1037 83.7
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 0.0e+00 1198.7 1043 82.6
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 0.0e+00 1191.4 1041 82.4
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1160.2 1040 79.6
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1147.5 1044 79.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1135.2 1042 79.5
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1135.2 1042 79.5
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 0.0e+00 1124.4 1042 80.7
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1120.5 1049 79.2
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 0.0e+00 1102.4 1042 78.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 0.0e+00 1095.5 1039 78.2
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1077.0 1040 76.8
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 9.2e-310 1067.0 1042 77.3
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 6.6e-308 1060.8 1042 76.9
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 7.0e-302 1040.8 1047 75.5
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1046 73.8
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.4e-289 1000.0 1044 73.9
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.2e-288 996.9 1060 72.5
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 5.8e-288 994.6 1103 71.1
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-286 988.0 1106 70.3
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.1e-282 976.1 1083 71.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 6.2e-282 974.5 1097 70.0
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.6e-280 969.1 1042 72.9
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 3.8e-279 965.3 1107 69.5
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 5.4e-278 961.4 1106 69.5
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 9.2e-278 960.7 1096 69.3
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 2.1e-277 959.5 1043 72.3
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 7.8e-277 957.6 1106 69.4
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.3e-276 956.8 1103 69.3
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 6.6e-276 954.5 1106 69.2
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.5e-275 953.4 1122 67.5
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.9e-275 953.0 1052 70.9
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.3e-275 951.0 1047 71.3
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 9.6e-275 950.7 1043 71.8
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.8e-274 949.1 1059 71.6
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 2.8e-274 949.1 1048 71.7
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 5.3e-273 944.9 1046 60.6
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 3.4e-272 942.2 1105 68.0
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 7.6e-272 941.0 906 80.2
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.7e-271 939.9 1099 69.2
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.2e-271 939.5 1046 71.8
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.1e-270 937.2 1052 70.0
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 9.3e-270 934.1 1104 67.7
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.5e-269 932.2 1076 70.3
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 8.7e-268 927.5 1105 67.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.5e-267 926.0 1052 69.6
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 5.6e-267 924.9 1037 70.5
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 2.4e-265 919.5 1105 68.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 9.9e-264 914.1 1054 69.0
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 9.9e-264 914.1 1081 69.4
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.2e-263 912.9 1081 69.3
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.9e-262 909.8 1070 69.5
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.2e-261 907.1 1043 70.6
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 9.6e-259 897.5 1040 70.2
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 8.1e-258 894.4 1032 70.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.0e-257 892.1 1070 69.1
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 9.0e-257 891.0 1045 68.4
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.5e-256 888.6 1049 69.0
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1045 68.7
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.2e-254 882.5 1076 66.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 7.9e-253 877.9 1044 67.6
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 7.4e-251 871.3 1038 69.1
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 2.6e-248 862.8 1076 64.0
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 7.6e-248 861.3 1057 62.9
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 1.0e-247 860.9 1060 65.1
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.0e-247 860.9 1070 64.7
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.2e-247 859.8 1070 64.6
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.3e-244 850.5 1075 65.9
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.3e-244 850.5 1043 67.4
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 3.9e-244 849.0 1028 68.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 4.3e-243 845.5 1037 68.3
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.3e-242 844.0 1072 60.7
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.3e-242 844.0 1214 47.2
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 4.8e-242 842.0 1066 63.5
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 8.2e-242 841.3 1053 64.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 9.0e-241 837.8 1052 66.9
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 3.4e-240 835.9 1049 66.3
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.0e-239 834.3 1074 63.1
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 5.0e-239 832.0 1040 66.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.1e-238 830.9 1133 43.7
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 3.2e-238 829.3 1064 63.6
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.2e-237 827.4 1054 65.1
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 6.7e-236 821.6 1038 65.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.5e-232 810.4 1047 67.9
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 3.4e-232 809.3 1035 64.5
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.2e-230 802.7 1040 65.8
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.1e-229 798.5 490 79.0
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 3.3e-227 792.7 1057 62.1
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.8e-225 786.9 484 78.1
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 8.2e-218 761.5 490 73.3
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 7.0e-217 758.4 917 71.9
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 5.2e-212 742.3 489 72.2
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 7.5e-211 738.4 978 60.5
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.7e-203 712.2 823 63.2
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.0e-200 703.7 1038 53.5
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 7.7e-200 701.8 1034 56.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 6.1e-197 692.2 775 80.3
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.4e-196 691.0 488 67.4
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 2.5e-190 670.2 1036 59.6
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 3.9e-175 619.8 923 63.6
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 6.2e-173 612.5 480 62.3
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.5e-166 591.3 970 56.2
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.2e-161 573.2 832 69.5
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 8.1e-141 505.8 1022 45.3
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.3e-130 471.9 440 55.9
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 9.3e-129 465.7 1018 46.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 6.3e-117 426.4 252 81.0
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 4.4e-94 350.5 539 36.7
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 9.1e-92 342.8 709 56.4
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 5.2e-87 327.0 205 73.7
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 4.9e-85 320.5 334 55.7
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 6.3e-85 320.1 868 34.0
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 2.5e-81 308.1 201 72.1
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.1e-76 292.7 341 51.0
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 3.5e-67 261.2 462 35.3
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.6e-66 256.9 342 51.2
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.8e-63 248.8 170 71.2
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-60 237.3 268 51.5
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.2e-59 236.1 295 48.8
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.9e-57 228.8 197 64.5
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-53 216.1 866 28.5
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.5e-46 192.6 180 58.3
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.6e-43 182.6 99 80.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 4.6e-43 181.0 136 61.0
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 4.4e-38 164.5 183 51.4
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 4.6e-35 154.5 124 66.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-31 143.3 91 78.0
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.8e-31 142.5 111 70.3
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 5.3e-31 141.0 129 55.8
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 9.0e-31 140.2 129 55.8
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-28 132.5 75 78.7
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.8e-26 125.9 87 69.0
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 4.3e-25 121.3 76 75.0
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 6.2e-24 117.5 91 62.6
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 2.3e-18 99.0 105 54.3
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 6.7e-18 97.4 125 42.4
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 1.3e-13 83.2 324 26.9
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.1e-12 80.1 145 34.5
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.5e-12 79.0 45 82.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.7e-09 67.0 40 77.5
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.5e-06 59.7 49 49.0
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 7.7e-06 57.4 213 30.5


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