Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.1e-293 1011.5 487 100.0
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 5.2e-231 804.3 492 79.3
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 3.7e-229 798.1 474 80.6
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.0e-222 775.8 498 77.1
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 9.8e-214 746.9 492 75.0
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 9.2e-212 740.3 497 74.8
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 1.2e-211 740.0 491 74.9
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 2.1e-211 739.2 519 72.6
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 3.9e-210 734.9 497 73.8
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 4.6e-195 684.9 459 73.2
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 4.8e-192 674.9 489 68.1
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 1.7e-189 666.4 492 66.3
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 5.4e-188 661.4 490 66.5
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 4.6e-187 658.3 480 68.1
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.9e-187 657.5 482 67.4
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.7e-186 656.4 482 67.4
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 3.9e-186 655.2 480 67.5
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.2e-184 647.9 482 66.8
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 6.2e-184 647.9 487 67.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 8.1e-184 647.5 495 66.9
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 9.0e-183 644.0 489 64.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 2.6e-182 642.5 500 65.8
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 3.4e-182 642.1 485 65.6
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 3.8e-181 638.6 480 66.0
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 6.4e-181 637.9 497 64.8
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 8.4e-181 637.5 488 65.0
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.1e-180 637.1 480 65.8
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.9e-180 636.3 493 64.1
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 4.2e-180 635.2 493 65.3
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 7.9e-179 630.9 492 65.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.3e-178 630.2 489 64.8
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.3e-178 629.4 480 65.6
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 5.1e-178 628.2 490 64.5
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.5e-177 626.7 499 62.5
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.5e-177 626.7 532 62.6
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.6e-176 623.2 493 63.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.8e-176 622.5 492 65.9
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 3.7e-176 622.1 494 63.2
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.4e-175 620.2 495 63.0
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.4e-175 619.4 465 66.7
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.1e-175 619.0 468 65.0
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.2e-174 617.1 497 63.8
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 2.2e-173 612.8 481 64.0
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 3.8e-173 612.1 482 63.9
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.8e-170 603.2 491 62.5
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 5.1e-170 601.7 511 60.1
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 8.7e-170 600.9 508 61.2
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 8.7e-170 600.9 486 62.6
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 8.7e-170 600.9 490 62.7
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.5e-169 600.1 490 62.4
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.9e-169 599.7 485 63.7
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 2.5e-169 599.4 473 63.0
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.5e-169 599.4 491 60.9
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 4.8e-168 595.1 488 62.3
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 7.6e-166 587.8 493 59.8
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.7e-165 586.6 492 60.4
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.5e-164 582.8 479 61.4
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.2e-163 580.5 474 64.6
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 2.1e-163 579.7 498 60.6
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.1e-163 579.7 488 59.0
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.8e-162 576.6 507 59.6
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 3.0e-162 575.9 522 58.4
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 5.1e-162 575.1 496 59.1
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 8.7e-162 574.3 495 58.8
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.1e-161 573.9 480 57.7
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.9e-161 573.2 497 61.2
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 3.7e-160 568.9 492 60.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 4.8e-160 568.5 488 58.2
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 4.8e-160 568.5 491 57.8
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.8e-160 568.5 428 65.9
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 4.8e-160 568.5 463 62.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 8.2e-160 567.8 493 58.0
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.1e-159 567.4 491 59.9
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 1.8e-159 566.6 506 58.1
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.1e-159 565.5 443 64.3
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 4.1e-159 565.5 423 66.0
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.4e-158 562.4 450 63.6
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 2.2e-157 559.7 487 58.3
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 2.9e-157 559.3 492 58.1
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.4e-156 557.0 474 58.9
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 4.2e-156 555.4 484 57.4
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 4.2e-156 555.4 484 57.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 9.4e-156 554.3 480 56.9
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.6e-155 552.0 434 63.1
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 6.1e-155 551.6 485 57.5
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 7.9e-155 551.2 489 57.3
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 8.8e-154 547.7 499 56.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 8.8e-154 547.7 485 56.7
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.7e-152 543.5 485 58.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.4e-151 540.4 487 56.7
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.2e-150 537.3 468 57.1
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 3.4e-150 535.8 485 57.5
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.5e-150 535.4 499 58.1
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 5.5e-148 528.5 489 55.0
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 4.4e-145 518.8 440 60.7
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.8e-144 516.2 496 53.6
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.5e-137 491.5 515 51.5
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 4.8e-136 488.8 505 51.9
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.8e-127 460.3 313 72.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 2.2e-125 453.4 546 46.2
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 8.5e-125 451.4 568 44.9
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.2e-123 447.6 490 49.2
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 2.2e-120 436.8 412 55.3
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.2e-113 414.5 492 48.2
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 5.2e-106 389.0 349 59.3
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 7.5e-105 385.2 311 62.7
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 5.6e-100 369.0 462 45.0
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.2e-96 357.1 333 55.9
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 6.4e-96 355.5 494 41.9
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 6.2e-83 312.4 289 56.7
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.0e-65 254.2 312 50.0
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.4e-63 248.1 144 79.9
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.2e-62 245.0 383 36.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 6.7e-61 239.2 485 32.4
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 2.4e-50 204.1 719 26.7
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 3.0e-37 160.6 335 32.2
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.2e-31 139.4 95 70.5
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.0e-28 131.3 152 51.3
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.8e-26 124.8 139 50.4
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.9e-25 119.8 74 73.0
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.8e-16 90.5 126 43.7
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 4.7e-06 57.0 101 36.6
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 8.0e-06 56.2 31 77.4


User provided reference genes

Program Settings