Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0007126 Lotus japonicus HOM05D000773 ORTHO05D000588 3.2e-150 535.0 262 100.0
Lj4g0001914 Lotus japonicus HOM05D000773 ORTHO05D000588 2.7e-77 292.7 218 69.3
Medtr7g066880 Medicago truncatula HOM05D000773 ORTHO05D000588 1.4e-36 157.5 246 40.2
TPR.G1589 Trifolium pratense HOM05D000773 ORTHO05D000588 2.9e-34 149.8 264 40.2
Psat6g094440 Pisum sativum HOM05D000773 ORTHO05D000588 7.8e-32 141.7 246 38.6
Psat6g094480 Pisum sativum HOM05D000773 ORTHO05D000588 3.0e-31 139.8 246 38.2
Medtr7g066890 Medicago truncatula HOM05D000773 ORTHO05D000588 7.3e-30 135.2 286 38.1
TPR.G1568 Trifolium pratense HOM05D000773 ORTHO05D000588 1.4e-28 131.0 241 38.6
Psat3g131360 Pisum sativum HOM05D000773 ORTHO05D000588 3.4e-27 126.3 270 34.4
TPR.G1578 Trifolium pratense HOM05D000773 ORTHO05D000588 3.4e-27 126.3 258 36.4
Psat0s2251g0080 Pisum sativum HOM05D000773 ORTHO05D000588 1.3e-26 124.4 264 37.1
Medtr7g066970 Medicago truncatula HOM05D000773 ORTHO05D000588 3.7e-26 122.9 216 38.4
Medtr8g098880 Medicago truncatula HOM05D000773 ORTHO05D000588 3.3e-22 109.8 277 31.4
Glyma.07G145600 Glycine max HOM05D000773 ORTHO05D000588 4.3e-22 109.4 259 34.4
Ca_05717_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 4.0e-20 102.8 144 45.1
Ca_07609_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 4.0e-20 102.8 144 45.1
Ca_07611_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 6.8e-20 102.1 154 43.5
Medtr7g067580 Medicago truncatula HOM05D000773 ORTHO05D000588 8.9e-20 101.7 165 40.6
arahy.Tifrunner.gnm1.ann1.BYNY5R Arachis hypogaea HOM05D000773 ORTHO05D000588 1.7e-18 97.4 226 36.3
Lalb_Chr03g0042181 Lupinus albus HOM05D000773 ORTHO05D000588 2.9e-18 96.7 286 32.2
Lalb_Chr19g0125361 Lupinus albus HOM05D000773 ORTHO05D000588 9.6e-14 81.6 178 37.6
TPR.G16860 Trifolium pratense HOM05D004465 ORTHO05D005450 9.6e-14 81.6 195 34.9
Medtr7g066920 Medicago truncatula HOM05D000773 ORTHO05D000588 2.4e-12 77.0 70 57.1
arahy.Tifrunner.gnm1.ann1.AG8GG0 Arachis hypogaea HOM05D000773 ORTHO05D000588 4.4e-11 72.8 107 43.9
Cfa017254 Carpinus fangiana HOM05D000773 ORTHO05D000588 4.4e-11 72.8 300 26.3
TPR.G1571 Trifolium pratense HOM05D000773 ORTHO05D000588 4.4e-11 72.8 96 43.8
VMungo1383G0179 Vigna mungo HOM05D000773 ORTHO05D000588 2.9e-10 70.1 215 29.3
Dinv37083 Davidia involucrata HOM05D000773 ORTHO05D000588 3.8e-10 69.7 254 24.4
Phvul.008G107600 Phaseolus vulgaris HOM05D000773 ORTHO05D000588 3.8e-10 69.7 164 32.3
Prupe.6G270800 Prunus persica HOM05D000773 ORTHO05D000588 3.8e-10 69.7 305 27.2
Dinv35511 Davidia involucrata HOM05D000773 ORTHO05D000588 4.9e-10 69.3 279 28.0
Dinv14528 Davidia involucrata HOM05D000773 ORTHO05D000588 1.4e-09 67.8 279 27.6
CSS0017948 Camellia sinensis var. sinensis HOM05D000773 ORTHO05D000588 2.1e-08 63.9 270 25.6
CSS0026255 Camellia sinensis var. sinensis HOM05D000773 ORTHO05D000588 2.1e-08 63.9 270 25.6
Ciclev10011958m.g Citrus clementina HOM05D000773 ORTHO05D000588 2.1e-08 63.9 251 27.5
PGSC0003DMG400020320 Solanum tuberosum HOM05D000773 ORTHO05D000588 2.1e-08 63.9 275 25.8
CAN.G338.62 Capsicum annuum HOM05D000773 ORTHO05D000588 6.0e-08 62.4 261 27.2
Nitab4.5_0001837g0020 Nicotiana tabacum HOM05D000773 ORTHO05D000588 1.3e-07 61.2 288 26.7
Sopen09g007050 Solanum pennellii HOM05D000773 ORTHO05D000588 1.7e-07 60.8 281 26.3
Peaxi162Scf00141g00719 Petunia axillaris HOM05D000773 ORTHO05D000588 3.0e-07 60.1 290 27.2
Oeu040796.1 Olea europaea HOM05D000773 ORTHO05D000588 5.1e-07 59.3 95 35.8
Solyc09g014170.3 Solanum lycopersicum HOM05D000773 ORTHO05D000588 5.1e-07 59.3 281 26.3
Oeu040795.1 Olea europaea HOM05D000773 ORTHO05D000588 1.5e-06 57.8 281 23.8
MD12G1160300 Malus domestica HOM05D000773 ORTHO05D000588 1.9e-06 57.4 301 25.2
TAR633G0182 Trochodendron aralioides HOM05D000773 ORTHO05D000588 2.5e-06 57.0 277 26.4
Nitab4.5_0000008g0790 Nicotiana tabacum HOM05D000773 ORTHO05D000588 5.6e-06 55.8 288 26.4
SalBow5G1897 Salvia bowleyana HOM05D000773 ORTHO05D000588 5.6e-06 55.8 250 26.0


User provided reference genes

Program Settings