Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 4.5e-55 217.6 106 100.0
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 1.6e-31 139.4 103 61.2
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 2.7e-31 138.7 104 59.6
Lj2C976T3 Lonicera japonica HOM05D000003 ORTHO05D000022 3.2e-24 115.2 94 55.3
Lj1P1149T59 Lonicera japonica HOM05D012818 ORTHO05D000022 2.1e-20 102.4 79 63.3
Lj4C70T10 Lonicera japonica HOM05D000003 ORTHO05D000022 1.2e-15 86.7 92 46.7
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 1.5e-13 79.7 102 37.3
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 3.6e-12 75.1 78 44.9
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.1e-11 73.6 105 36.2
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-11 73.2 103 34.0
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.4e-11 73.2 105 35.2
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.3e-11 72.4 105 35.2
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 4.0e-11 71.6 105 36.2
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.2e-11 71.2 103 36.9
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 5.2e-11 71.2 74 43.2
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 6.8e-11 70.9 105 36.2
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.9e-11 70.5 103 33.0
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.2e-10 70.1 92 38.0
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-10 69.7 103 32.0
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 2.0e-10 69.3 105 35.2
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-10 68.9 98 33.7
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-10 68.9 103 33.0
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-10 68.9 103 35.9
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.4e-10 68.2 102 34.3
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 4.4e-10 68.2 105 38.1
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.8e-10 67.8 103 33.0
Lj2P525T35 Lonicera japonica HOM05D012818 ORTHO05D000022 7.6e-10 67.4 103 33.0
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.6e-10 67.4 73 41.1
Lj8C62T5 Lonicera japonica HOM05D000003 ORTHO05D000022 9.9e-10 67.0 89 38.2
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-09 66.6 103 32.0
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-09 64.3 103 33.0
Solyc06g082170.2 Solanum lycopersicum HOM05D000314 ORTHO05D000189 8.4e-09 63.9 106 36.8
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 8.4e-09 63.9 103 28.2
Nitab4.5_0003867g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.1e-08 63.5 104 33.7
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-08 62.8 102 32.4
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.4e-08 62.4 103 30.1
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.4e-08 62.4 104 29.8
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 2.4e-08 62.4 98 36.7
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-08 62.0 93 33.3
Lj6P746T45 Lonicera japonica HOM05D016027 ORTHO05D000022 3.2e-08 62.0 78 39.7
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 3.2e-08 62.0 100 31.0
Atru.chr11.1190 Acer truncatum HOM05D000003 ORTHO05D000022 4.1e-08 61.6 92 34.8
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-08 61.6 98 32.7
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 4.1e-08 61.6 99 31.3
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 7.1e-08 60.8 72 40.3
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-08 60.5 103 33.0
QL10p048631 Quercus lobata HOM05D027877 ORTHO05D000022 9.2e-08 60.5 91 29.7
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-07 60.1 103 29.1
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 1.2e-07 60.1 91 33.0
RcHm_v2.0_Chr6g0266871 Rosa chinensis HOM05D000003 ORTHO05D000022 1.2e-07 60.1 91 34.1
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.6e-07 59.7 103 32.0
vmacro04689 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 1.6e-07 59.7 99 29.3
TPR.G1810 Trifolium pratense HOM05D000290 ORTHO05D007415 2.1e-07 59.3 101 32.7
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-07 58.9 93 31.2
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-07 58.9 103 31.1
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 58.5 94 30.9
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.5e-07 58.5 103 31.1
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 3.5e-07 58.5 99 29.3
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 3.5e-07 58.5 93 35.5
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.6e-07 58.2 95 30.5
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.6e-07 58.2 88 33.0
Lj2C252G1 Lonicera japonica HOM05D012818 ORTHO05D000022 4.6e-07 58.2 75 36.0
Lj8P347T0 Lonicera japonica HOM05D016027 ORTHO05D010957 4.6e-07 58.2 96 35.4
Medtr1g056190 Medicago truncatula HOM05D008718 ORTHO05D010957 4.6e-07 58.2 71 42.3
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.0e-07 57.8 90 34.4
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 6.0e-07 57.8 107 33.6
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-06 57.0 105 31.4
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-06 57.0 97 34.0
Atru.chr13.1498 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 56.6 93 38.7
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 1.3e-06 56.6 98 31.6
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 56.2 89 33.7
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-06 56.2 90 35.6
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-06 56.2 90 35.6
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-06 56.2 91 28.6
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.3e-06 55.8 103 30.1
Medtr1g040395 Medicago truncatula HOM05D008718 ORTHO05D010957 2.3e-06 55.8 93 36.6
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 2.3e-06 55.8 93 32.3
COL.COLO4_20072 Corchorus olitorius HOM05D003999 ORTHO05D010957 3.0e-06 55.5 80 38.8
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 3.0e-06 55.5 93 31.2
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.9e-06 55.1 94 29.8
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.9e-06 55.1 103 30.1
Lj6g0023576 Lotus japonicus HOM05D000003 ORTHO05D000022 3.9e-06 55.1 92 33.7
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 3.9e-06 55.1 98 31.6
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-06 54.7 94 29.8
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 5.1e-06 54.7 83 31.3
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 5.1e-06 54.7 83 31.3
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 5.1e-06 54.7 94 35.1
Sabra17G0024600 Salix brachista HOM05D000003 ORTHO05D000022 5.1e-06 54.7 102 34.3
vmacro04690 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 5.1e-06 54.7 90 30.0
QL09p044651 Quercus lobata HOM05D014996 ORTHO05D016254 6.6e-06 54.3 90 33.3
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 6.6e-06 54.3 99 28.3
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 8.6e-06 53.9 104 27.9
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.6e-06 53.9 96 34.4
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 8.6e-06 53.9 83 30.1
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 8.6e-06 53.9 103 30.1
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 8.6e-06 53.9 92 27.2
Sabra17G0024700 Salix brachista HOM05D000003 ORTHO05D000022 8.6e-06 53.9 102 34.3
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 8.6e-06 53.9 88 30.7


User provided reference genes

Program Settings