Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 8.0e-285 983.0 476 100.0
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 4.3e-238 827.8 471 83.2
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.4e-236 822.0 476 81.9
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 3.1e-236 821.6 475 81.3
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.5e-235 819.3 476 81.7
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.3e-234 816.2 471 82.4
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 6.4e-234 813.9 466 82.0
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 6.4e-234 813.9 466 82.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.4e-233 812.0 476 81.7
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 3.2e-233 811.6 476 80.9
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 5.4e-233 810.8 476 80.9
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 9.3e-233 810.1 466 80.9
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.6e-232 809.3 476 80.3
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 6.0e-232 807.4 472 80.3
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.3e-231 806.2 465 82.2
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 1.5e-230 802.7 475 80.0
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 3.3e-230 801.6 466 80.0
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.3e-230 801.2 476 81.1
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.3e-229 799.7 471 79.6
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.1e-229 798.9 462 81.6
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 6.2e-229 797.3 463 80.6
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 2.4e-228 795.4 488 78.5
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 3.1e-228 795.0 468 79.9
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 4.0e-228 794.7 465 80.4
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 5.3e-228 794.3 471 79.8
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 9.0e-228 793.5 496 76.4
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.5e-227 792.7 464 79.5
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.0e-227 792.3 466 80.0
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 2.0e-227 792.3 471 80.5
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 2.0e-227 792.3 461 80.5
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 5.8e-227 790.8 469 78.9
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 7.6e-227 790.4 462 80.1
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 9.9e-227 790.0 474 79.7
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-226 789.6 471 79.2
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 3.8e-226 788.1 471 79.2
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.9e-226 787.7 461 79.0
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 6.4e-226 787.3 462 79.4
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.1e-225 786.6 461 79.8
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.4e-225 786.2 461 79.4
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.9e-225 785.8 471 79.0
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.4e-225 784.3 466 78.5
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 9.3e-225 783.5 473 76.5
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.6e-224 782.7 471 78.6
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.1e-224 782.3 464 79.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 2.7e-224 781.9 459 80.8
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 3.5e-224 781.6 473 76.5
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 4.6e-224 781.2 499 76.4
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.0e-223 780.0 450 81.3
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.3e-223 779.6 474 79.1
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 3.0e-223 778.5 463 77.8
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 3.9e-223 778.1 463 77.3
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.1e-222 776.5 461 78.3
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.1e-222 776.5 464 78.4
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.5e-222 776.2 464 78.2
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 2.5e-222 775.4 470 76.6
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 7.4e-222 773.9 539 70.5
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.6e-221 772.7 463 77.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 3.6e-221 771.5 462 77.5
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 4.8e-221 771.2 461 78.3
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 8.1e-221 770.4 460 78.0
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 2.4e-220 768.8 463 78.4
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 3.1e-220 768.5 462 77.5
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 3.1e-220 768.5 540 70.2
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 4.0e-220 768.1 485 74.6
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 4.0e-220 768.1 469 77.4
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 6.9e-220 767.3 481 75.1
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 9.0e-220 766.9 465 76.6
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 9.0e-220 766.9 472 75.4
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.2e-219 766.5 465 76.3
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 2.6e-219 765.4 502 75.3
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.5e-219 764.6 469 77.2
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 5.8e-219 764.2 476 76.9
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 2.9e-218 761.9 476 75.8
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 1.4e-217 759.6 474 75.5
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.6e-216 756.1 585 65.6
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.3e-215 753.1 466 76.8
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 3.0e-215 751.9 469 74.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.5e-214 749.6 451 78.7
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 9.6e-214 746.9 462 75.1
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 9.6e-214 746.9 476 74.4
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 6.2e-213 744.2 462 74.9
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 1.8e-212 742.7 469 73.3
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 6.9e-212 740.7 462 74.5
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 6.9e-212 740.7 466 73.4
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 9.0e-212 740.3 466 74.9
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.0e-211 739.2 439 78.1
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 5.8e-211 737.6 459 74.3
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 5.8e-211 737.6 436 78.9
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 4.9e-210 734.6 469 73.8
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 3.2e-209 731.9 469 73.6
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 7.1e-209 730.7 469 73.8
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.1e-208 729.2 421 80.0
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 1.8e-207 726.1 487 70.4
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.3e-207 725.7 469 73.1
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 2.3e-207 725.7 469 73.3
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.3e-207 725.7 455 76.5
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 3.9e-207 724.9 469 73.3
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.6e-205 719.5 421 79.1
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.8e-204 716.1 471 72.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 4.1e-204 714.9 471 72.6
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.2e-202 709.1 463 73.2
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 4.6e-200 701.4 458 71.2
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 1.3e-197 693.3 398 84.2
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.3e-194 683.3 472 69.5
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 6.7e-191 671.0 439 72.2
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 5.7e-190 667.9 460 67.8
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.5e-187 659.8 470 68.3
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 1.1e-185 653.7 421 73.4
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 2.5e-185 652.5 462 67.1
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 4.7e-184 648.3 464 66.4
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.2e-181 639.4 464 65.5
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.8e-180 636.3 464 64.0
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 5.3e-180 634.8 448 67.2
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 9.4e-177 624.0 363 83.2
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 3.0e-175 619.0 463 65.0
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.0e-175 618.6 461 65.1
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 2.0e-174 616.3 472 65.9
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 9.7e-174 614.0 455 65.5
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.2e-168 597.0 454 63.2
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.2e-165 586.3 480 61.7
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 1.6e-155 553.5 476 57.8
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.3e-145 519.2 311 80.1
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 2.8e-144 516.2 352 71.3
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 5.4e-124 448.7 502 48.6
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.6e-123 447.2 418 53.3
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 2.0e-118 430.3 282 73.0
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.7e-117 427.2 319 66.5
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.1e-116 424.5 255 76.5
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.3e-106 390.2 261 71.6
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.9e-100 370.5 333 60.1
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-89 334.7 260 60.0
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 7.6e-86 322.0 198 76.3
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.8e-85 319.7 214 66.8
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 2.8e-80 303.5 242 60.3
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 1.7e-64 251.1 140 87.1
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.1e-55 221.9 162 63.0
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 1.9e-52 211.1 144 70.8
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.4e-47 193.0 113 77.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 6.1e-43 179.5 178 57.3
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 5.2e-42 176.4 156 60.9
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 6.8e-42 176.0 101 83.2
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.6e-38 164.9 91 80.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.7e-35 153.3 115 66.1
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.0e-30 137.9 95 70.5
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 1.8e-18 98.2 113 53.1
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 5.4e-15 86.7 57 61.4
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 2.5e-12 77.8 57 66.7
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 6.2e-11 73.2 58 69.0
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.4e-10 72.0 49 77.6
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.4e-10 72.0 49 77.6
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.2e-09 68.9 65 66.2


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