Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C850T7 Lonicera japonica HOM05D000002 ORTHO05D006339 5.1e-154 547.7 281 100.0
Lj6A285T31 Lonicera japonica HOM05D000002 ORTHO05D006339 1.9e-100 369.8 262 76.3
Dinv42804 Davidia involucrata HOM05D000002 ORTHO05D006339 1.5e-84 317.0 279 64.9
Dinv43297 Davidia involucrata HOM05D000002 ORTHO05D006339 1.5e-84 317.0 279 64.9
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-80 303.5 262 66.0
QL11p008633 Quercus lobata HOM05D000002 ORTHO05D006339 5.3e-79 298.5 279 59.9
TAR369G0907 Trochodendron aralioides HOM05D000002 ORTHO05D006339 1.5e-76 290.4 262 61.8
Atru.chr7.1011 Acer truncatum HOM05D000002 ORTHO05D006339 1.9e-76 290.0 236 66.9
Haze_19096 Corylus avellana HOM05D000002 ORTHO05D006339 4.2e-76 288.9 236 66.5
HanXRQChr01g0007691 Helianthus annuus HOM05D000002 ORTHO05D006339 5.5e-76 288.5 262 63.0
CSS0014851 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D006339 7.2e-76 288.1 278 59.4
CSS0036040 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D006339 9.4e-76 287.7 236 66.5
Cfa020756 Carpinus fangiana HOM05D000002 ORTHO05D006339 1.2e-75 287.3 237 66.2
Prupe.1G063600 Prunus persica HOM05D000002 ORTHO05D006339 1.6e-75 287.0 238 66.0
Hma1.2p1_0269F.1_g107850 Hydrangea macrophylla HOM05D000002 ORTHO05D006339 2.7e-75 286.2 237 67.1
Hma1.2p1_0269F.1_g107870 Hydrangea macrophylla HOM05D000002 ORTHO05D006339 2.7e-75 286.2 237 67.1
Manes.18G125600 Manihot esculenta HOM05D000002 ORTHO05D006339 2.7e-75 286.2 236 64.8
vmacro13695 Vaccinium macrocarpon HOM05D000002 ORTHO05D006339 8.0e-75 284.6 236 66.1
Nitab4.5_0004053g0040 Nicotiana tabacum HOM05D000002 ORTHO05D006339 3.0e-74 282.7 278 57.9
Rhsim07G0058700 Rhododendron simsii HOM05D000002 ORTHO05D006339 4.0e-74 282.3 279 58.1
Cc02_g28480 Coffea canephora HOM05D000002 ORTHO05D006339 1.5e-73 280.4 279 56.3
Ciclev10007395m.g Citrus clementina HOM05D000002 ORTHO05D006339 2.0e-73 280.0 236 64.8
Potri.006G078900 Populus trichocarpa HOM05D000002 ORTHO05D006339 2.0e-73 280.0 279 57.0
Thecc.09G200300 Theobroma cacao HOM05D000002 ORTHO05D006339 3.4e-73 279.3 236 63.1
DCAR_015254 Daucus carota HOM05D000002 ORTHO05D006339 5.7e-73 278.5 283 57.6
Nn8g41139 Nelumbo nucifera HOM05D000002 ORTHO05D006339 5.7e-73 278.5 236 65.7
Migut.O00915 Erythranthe guttata HOM05D000002 ORTHO05D006339 7.5e-73 278.1 262 61.1
ClCG11G011400 Citrullus lanatus HOM05D000002 ORTHO05D006339 2.2e-72 276.6 280 56.8
Nitab4.5_0000707g0040 Nicotiana tabacum HOM05D000002 ORTHO05D006339 2.2e-72 276.6 278 57.6
Sopen01g034630 Solanum pennellii HOM05D000002 ORTHO05D006339 3.7e-72 275.8 261 60.5
MBI16_g00838_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D006339 8.3e-72 274.6 236 64.4
TWI34G1979 Tripterygium wilfordii HOM05D000002 ORTHO05D006339 1.1e-71 274.2 261 58.2
Sabra06G0059800 Salix brachista HOM05D000002 ORTHO05D006339 1.4e-71 273.9 279 55.9
Solyc01g087670.3 Solanum lycopersicum HOM05D000002 ORTHO05D006339 1.8e-71 273.5 261 60.5
CiPaw.16G104400 Carya illinoinensis HOM05D000002 ORTHO05D006339 4.1e-71 272.3 279 56.3
PGSC0003DMG400006784 Solanum tuberosum HOM05D000002 ORTHO05D006339 4.1e-71 272.3 263 58.9
Eucgr.C02168 Eucalyptus grandis HOM05D000002 ORTHO05D006339 9.1e-71 271.2 267 56.6
MD16G1237800 Malus domestica HOM05D000002 ORTHO05D006339 2.0e-70 270.0 237 63.7
CAN.G219.70 Capsicum annuum HOM05D000002 ORTHO05D006339 3.5e-70 269.2 261 58.2
GSVIVG01034133001 Vitis vinifera HOM05D000002 ORTHO05D006339 4.5e-70 268.9 278 56.5
Potri.018G148132 Populus trichocarpa HOM05D000002 ORTHO05D006339 3.8e-69 265.8 281 56.6
Hund15434 Selenicereus undatus HOM05D000002 ORTHO05D006339 3.8e-69 265.8 236 58.1
CANSAT80G2875 Cannabis sativa HOM05D000002 ORTHO05D006339 1.1e-68 264.2 240 61.7
Migut.N01789 Erythranthe guttata HOM05D000002 ORTHO05D006339 1.5e-68 263.8 263 58.9
arahy.Tifrunner.gnm1.ann1.BDIQ8A Arachis hypogaea HOM05D000002 ORTHO05D006339 1.9e-68 263.5 236 59.3
PGR044G0614 Punica granatum HOM05D000002 ORTHO05D006339 3.2e-68 262.7 238 62.6
MD13G1232300 Malus domestica HOM05D000002 ORTHO05D006339 4.2e-68 262.3 238 62.6
arahy.Tifrunner.gnm1.ann1.M3F3BS Arachis hypogaea HOM05D000002 ORTHO05D006339 5.5e-68 261.9 236 58.9
Ca_25635_v3 Cicer arietinum L. HOM05D000002 ORTHO05D006339 9.5e-68 261.2 267 55.1
Sed0008706 Sechium edule HOM05D000002 ORTHO05D006339 1.6e-67 260.4 270 55.2
Sc16g0000960 Simmondsia chinensis HOM05D000002 ORTHO05D006339 2.8e-67 259.6 238 58.8
Aa31LG9G9550 Aethionema arabicum HOM05D000002 ORTHO05D006339 4.7e-67 258.8 236 60.2
PSO063G6760 Papaver somniferum HOM05D000002 ORTHO05D006339 4.7e-67 258.8 237 60.3
PSO782G0950 Papaver somniferum HOM05D000002 ORTHO05D006339 4.7e-67 258.8 237 59.9
Sc16g0001110 Simmondsia chinensis HOM05D000002 ORTHO05D006339 4.7e-67 258.8 238 58.8
Peaxi162Scf00694g00221 Petunia axillaris HOM05D000002 ORTHO05D006339 8.0e-67 258.1 278 55.8
Aqoxy6G00620 Aquilegia oxysepala HOM05D000002 ORTHO05D006339 1.0e-66 257.7 278 55.0
Lalb_Chr24g0394161 Lupinus albus HOM05D000002 ORTHO05D006339 1.0e-66 257.7 236 59.3
AUR62014228 Chenopodium quinoa HOM05D000002 ORTHO05D006339 2.3e-66 256.5 262 53.4
Gohir.D08G026300 Gossypium hirsutum HOM05D000002 ORTHO05D006339 2.3e-66 256.5 238 58.4
Gorai.004G022700 Gossypium raimondii HOM05D000002 ORTHO05D006339 2.3e-66 256.5 238 58.4
Gohir.A08G016100 Gossypium hirsutum HOM05D000002 ORTHO05D006339 3.0e-66 256.1 237 59.1
arahy.Tifrunner.gnm1.ann1.TJ5BAV Arachis hypogaea HOM05D000002 ORTHO05D006339 4.0e-66 255.8 235 59.1
Medtr6g093060 Medicago truncatula HOM05D000002 ORTHO05D006339 5.2e-66 255.4 236 58.9
arahy.Tifrunner.gnm1.ann1.2JX1G7 Arachis hypogaea HOM05D000002 ORTHO05D006339 1.2e-65 254.2 236 58.5
EL10Ac6g14036 Beta vulgaris HOM05D000002 ORTHO05D006339 1.2e-65 254.2 237 59.1
Duzib150G0743 Durio zibethinus HOM05D000002 ORTHO05D006339 2.0e-65 253.4 262 55.3
Glyma.08G359600 Glycine max HOM05D000002 ORTHO05D006339 2.0e-65 253.4 237 59.1
COL.COLO4_34912 Corchorus olitorius HOM05D000002 ORTHO05D006339 2.6e-65 253.1 262 55.0
MBI15_g00655_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D006339 5.7e-65 251.9 265 53.6
RcHm_v2.0_Chr4g0397311 Rosa chinensis HOM05D000002 ORTHO05D006339 9.8e-65 251.1 237 59.1
FvH4_4g06010 Fragaria vesca HOM05D000002 ORTHO05D006339 4.9e-64 248.8 237 59.1
FAN12G3290 Fragaria x ananassa HOM05D000002 ORTHO05D006339 4.9e-64 248.8 237 59.1
AUR62038500 Chenopodium quinoa HOM05D000002 ORTHO05D006339 1.1e-63 247.7 262 52.7
MELO3C003929.2 Cucumis melo HOM05D000002 ORTHO05D006339 1.1e-63 247.7 279 53.0
MSTRG.4228 Avicennia marina HOM05D000002 ORTHO05D006339 1.8e-63 246.9 236 59.7
Lj2g0025887 Lotus japonicus HOM05D000002 ORTHO05D006339 1.8e-63 246.9 236 57.2
Phvul.004G178100 Phaseolus vulgaris HOM05D000002 ORTHO05D006339 9.2e-63 244.6 236 58.5
CsaV3_2G009090 Cucumis sativus L. HOM05D000002 ORTHO05D006339 1.2e-62 244.2 279 52.7
Lsat_1_v5_gn_1_27101 Lactuca sativa HOM05D000002 ORTHO05D006339 2.7e-62 243.0 244 59.4
VMungo0464G2179 Vigna mungo HOM05D000002 ORTHO05D006339 2.7e-62 243.0 238 58.0
FAN22G1697 Fragaria x ananassa HOM05D000002 ORTHO05D006339 7.8e-62 241.5 236 57.2
Thhalv10028405m.g Eutrema salsugineum HOM05D000002 ORTHO05D006339 1.0e-61 241.1 237 56.5
AL6G48450 Arabidopsis lyrata HOM05D000002 ORTHO05D006339 1.3e-61 240.7 238 55.9
Carub.0006s3286 Capsella rubella HOM05D000002 ORTHO05D006339 1.7e-61 240.4 240 55.8
FAN07G2584 Fragaria x ananassa HOM05D000002 ORTHO05D006339 2.9e-61 239.6 241 57.3
Sp6g04020 Schrenkiella parvula HOM05D000002 ORTHO05D006339 3.8e-61 239.2 237 56.5
Psat1g051320 Pisum sativum HOM05D000002 ORTHO05D006339 5.0e-61 238.8 240 54.6
C03p36490 Brassica napus HOM05D000002 ORTHO05D006339 8.6e-61 238.0 237 56.5
A03p30240 Brassica napus HOM05D000002 ORTHO05D006339 1.1e-60 237.7 237 54.0
BraA03t12208Z Brassica rapa HOM05D000002 ORTHO05D006339 1.1e-60 237.7 237 54.0
BolC3t15962H Brassica oleracea HOM05D000002 ORTHO05D006339 2.5e-60 236.5 237 55.7
Os06g0644600 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D006339 5.6e-60 235.3 243 53.1
Glyma.01G001600 Glycine max HOM05D000002 ORTHO05D006339 9.5e-60 234.6 237 58.6
AT4G04940 Arabidopsis thaliana HOM05D000002 ORTHO05D006339 1.2e-59 234.2 238 55.9
THA.LOC104815310 Tarenaya hassleriana HOM05D000002 ORTHO05D006339 1.2e-59 234.2 236 55.1
TPR.G21348 Trifolium pratense HOM05D000002 ORTHO05D006339 2.8e-59 233.0 240 53.3
CARHR252600 Cardamine hirsuta HOM05D000002 ORTHO05D006339 4.7e-59 232.3 236 54.2
ATR0626G089 Amborella trichopoda HOM05D000002 ORTHO05D006339 7.5e-57 224.9 240 54.2
Zm00001eb386980 Zea mays HOM05D000002 ORTHO05D006339 3.7e-56 222.6 243 51.4
SGA_v2.0_scaffold7G03720 Striga asiatica HOM05D000002 ORTHO05D006339 4.6e-54 215.7 262 50.0
CDE07G0379 Ceratophyllum demersum HOM05D000002 ORTHO05D006339 2.3e-53 213.4 261 47.5
FAN17G1253 Fragaria x ananassa HOM05D000002 ORTHO05D006339 5.6e-52 208.8 230 52.6
HPP92_004726 Vanilla planifolia HOM05D000002 ORTHO05D006339 9.5e-52 208.0 246 49.6
unitig_747.g21292 Utricularia gibba HOM05D000002 ORTHO05D006339 8.9e-50 201.4 199 55.8
SEGI_16871 Sequoiadendron giganteum HOM05D000002 ORTHO05D006339 4.1e-47 192.6 266 43.6
Oeu033365.1 Olea europaea HOM05D000002 ORTHO05D006339 8.6e-45 184.9 141 68.8
Mapoly0004s0293 Marchantia polymorpha HOM05D000002 ORTHO05D006339 1.9e-44 183.7 243 43.6
Oeu027399.3 Olea europaea HOM05D000002 ORTHO05D006339 5.6e-44 182.2 173 58.4
Cpa.g.sc74.40 Carica papaya HOM05D000002 ORTHO05D006339 5.1e-37 159.1 143 58.7
Pp3c7_4500 Physcomitrium patens HOM05D000002 ORTHO05D006339 8.1e-35 151.8 285 33.7
AagrBONN_evm.TU.Sc2ySwM_340.348 Anthoceros agrestis HOM05D000002 ORTHO05D006339 2.4e-34 150.2 269 37.2
CBR_g5707 Chara braunii HOM05D000002 ORTHO05D006339 2.2e-32 143.7 181 43.1
BcaC09g51499 Brassica carinata HOM05D000002 ORTHO05D006339 6.6e-29 132.1 185 44.3
SMO361G0562 Selaginella moellendorffii HOM05D000002 ORTHO05D006339 1.4e-26 124.4 265 34.3
Ca_25605_v3 Cicer arietinum L. HOM05D000002 ORTHO05D006339 1.2e-22 111.3 82 65.9
Actinidia19421 Actinidia chinensis HOM05D000002 ORTHO05D006339 3.0e-21 106.7 71 77.5
RcHm_v2.0_Chr4g0397331 Rosa chinensis HOM05D000002 ORTHO05D006339 6.4e-16 89.0 77 57.1
Cre10.g466250 Chlamydomonas reinhardtii HOM05D000002 ORTHO05D006339 3.9e-13 79.7 222 28.8
MCO04G295 Micromonas commoda HOM05D000002 ORTHO05D006339 3.1e-10 70.1 251 27.1


User provided reference genes

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