Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C735T5 Lonicera japonica HOM05D001657 ORTHO05D001557 8.2e-126 454.1 301 100.0
CSS0000768 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 7.6e-23 112.1 146 47.3
Cc10_g15720 Coffea canephora HOM05D001657 ORTHO05D001557 6.0e-20 102.4 331 35.0
Nitab4.5_0000131g0430 Nicotiana tabacum HOM05D001657 ORTHO05D001557 1.8e-19 100.9 316 33.9
Dinv44845 Davidia involucrata HOM05D001657 ORTHO05D001557 3.9e-19 99.8 122 50.0
GSVIVG01009151001 Vitis vinifera HOM05D001657 ORTHO05D001557 1.3e-17 94.7 249 35.3
CiPaw.08G054700 Carya illinoinensis HOM05D001657 ORTHO05D001557 1.4e-16 91.3 107 51.4
Sopen00g006540 Solanum pennellii HOM05D001657 ORTHO05D001557 1.4e-16 91.3 301 36.5
Rhsim07G0210700 Rhododendron simsii HOM05D001657 ORTHO05D001557 3.1e-16 90.1 337 31.5
QL09p017335 Quercus lobata HOM05D001657 ORTHO05D001557 4.0e-16 89.7 95 55.8
CSS0021509 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 9.0e-16 88.6 323 33.7
Solyc04g076140.3 Solanum lycopersicum HOM05D001657 ORTHO05D001557 2.0e-15 87.4 301 36.5
CANSAT25G2610 Cannabis sativa HOM05D001657 ORTHO05D001557 3.4e-15 86.7 334 30.5
Peaxi162Scf00281g00113 Petunia axillaris HOM05D001657 ORTHO05D001557 9.9e-15 85.1 300 32.0
RcHm_v2.0_Chr7g0237111 Rosa chinensis HOM05D001657 ORTHO05D001557 1.7e-14 84.3 300 31.0
Cfa013693 Carpinus fangiana HOM05D001657 ORTHO05D001557 2.2e-14 84.0 95 55.8
Potri.002G104300 Populus trichocarpa HOM05D001657 ORTHO05D001557 2.2e-14 84.0 304 32.2
PGR031G0750 Punica granatum HOM05D001657 ORTHO05D001557 6.4e-14 82.4 136 35.3
Thecc.08G068900 Theobroma cacao HOM05D001657 ORTHO05D001557 1.9e-13 80.9 131 43.5
Migut.N02865 Erythranthe guttata HOM05D001657 ORTHO05D001557 5.5e-13 79.3 301 31.6
Manes.18G060400 Manihot esculenta HOM05D001657 ORTHO05D001557 7.1e-13 79.0 265 33.6
vmacro04666 Vaccinium macrocarpon HOM05D001657 ORTHO05D001557 1.6e-12 77.8 313 31.0
Duzib041G0188 Durio zibethinus HOM05D001657 ORTHO05D001557 2.1e-12 77.4 131 45.0
Sopen04g030030 Solanum pennellii HOM05D001657 ORTHO05D001557 3.5e-12 76.6 274 35.0
Duzib093G1654 Durio zibethinus HOM05D001657 ORTHO05D001557 6.0e-12 75.9 131 41.2
Potri.005G157400 Populus trichocarpa HOM05D001657 ORTHO05D001557 6.0e-12 75.9 102 45.1
Sabra02G0081800 Salix brachista HOM05D001657 ORTHO05D001557 6.0e-12 75.9 99 47.5
Atru.chr13.1036 Acer truncatum HOM05D001657 ORTHO05D001557 1.8e-11 74.3 298 35.6
Haze_22334 Corylus avellana HOM05D001657 ORTHO05D001557 1.8e-11 74.3 266 32.3
Actinidia29617 Actinidia chinensis HOM05D001657 ORTHO05D001557 2.3e-11 73.9 124 41.9
Carub.0007s1649 Capsella rubella HOM05D001657 ORTHO05D001557 3.0e-11 73.6 140 33.6
Duzib116G0150 Durio zibethinus HOM05D001657 ORTHO05D001557 3.0e-11 73.6 90 50.0
Hma1.2p1_0010F.1_g006880 Hydrangea macrophylla HOM05D001657 ORTHO05D001557 6.7e-11 72.4 108 43.5
Prupe.1G529100 Prunus persica HOM05D001657 ORTHO05D001557 6.7e-11 72.4 305 31.1
Ciclev10003194m.g Citrus clementina HOM05D001657 ORTHO05D001557 8.7e-11 72.0 244 30.7
COL.COLO4_35204 Corchorus olitorius HOM05D001657 ORTHO05D001557 8.7e-11 72.0 90 50.0
BcaNung04963 Brassica carinata HOM05D001657 ORTHO05D001557 1.1e-10 71.6 101 43.6
Lalb_Chr10g0102691 Lupinus albus HOM05D001657 ORTHO05D001557 1.1e-10 71.6 120 39.2
BcaC06g32874 Brassica carinata HOM05D001657 ORTHO05D001557 1.9e-10 70.9 101 42.6
Sp7g22580 Schrenkiella parvula HOM05D001657 ORTHO05D001557 1.9e-10 70.9 138 35.5
MD08G1195300 Malus domestica HOM05D001657 ORTHO05D001557 2.5e-10 70.5 273 35.5
Gorai.005G096000 Gossypium raimondii HOM05D001657 ORTHO05D001557 3.3e-10 70.1 78 50.0
CsaV3_2G030400 Cucumis sativus L. HOM05D001657 ORTHO05D001557 5.6e-10 69.3 95 42.1
C01p19910 Brassica napus HOM05D001657 ORTHO05D001557 9.6e-10 68.6 138 34.1
BolC1t01919H Brassica oleracea HOM05D001657 ORTHO05D001557 9.6e-10 68.6 138 34.1
FAN13G0459 Fragaria x ananassa HOM05D001657 ORTHO05D001557 9.6e-10 68.6 94 47.9
Nn5g29922 Nelumbo nucifera HOM05D001657 ORTHO05D001557 1.3e-09 68.2 140 39.3
ClCG08G011780 Citrullus lanatus HOM05D001657 ORTHO05D001557 2.8e-09 67.0 335 27.2
TAR381G1586 Trochodendron aralioides HOM05D001657 ORTHO05D001557 2.8e-09 67.0 173 35.8
Gohir.A02G077900 Gossypium hirsutum HOM05D001657 ORTHO05D001557 4.8e-09 66.2 78 47.4
AL7G28620 Arabidopsis lyrata HOM05D001657 ORTHO05D001557 1.1e-08 65.1 103 35.9
BcaC09g50851 Brassica carinata HOM05D001657 ORTHO05D001557 1.1e-08 65.1 104 39.4
A03p55400 Brassica napus HOM05D001657 ORTHO05D001557 1.4e-08 64.7 90 41.1
MBI02_g09035_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 1.4e-08 64.7 93 43.0
Cpa.g.sc21.1 Carica papaya HOM05D001657 ORTHO05D001557 1.8e-08 64.3 103 41.7
PSO017G2600 Papaver somniferum HOM05D001657 ORTHO05D001557 1.8e-08 64.3 107 41.1
MD15G1383100 Malus domestica HOM05D001657 ORTHO05D001557 2.4e-08 63.9 93 45.2
Hund27012 Selenicereus undatus HOM05D001657 ORTHO05D001557 2.4e-08 63.9 105 43.8
AT4G24580 Arabidopsis thaliana HOM05D001657 ORTHO05D001557 3.1e-08 63.5 140 30.7
BraA03t14598Z Brassica rapa HOM05D001657 ORTHO05D001557 3.1e-08 63.5 133 33.1
Gohir.A05G220500 Gossypium hirsutum HOM05D001657 ORTHO05D001557 3.1e-08 63.5 113 40.7
Gohir.D05G223350 Gossypium hirsutum HOM05D001657 ORTHO05D001557 3.1e-08 63.5 113 40.7
A01p15940 Brassica napus HOM05D001657 ORTHO05D001557 4.0e-08 63.2 102 39.2
Thhalv10024336m.g Eutrema salsugineum HOM05D001657 ORTHO05D001557 4.0e-08 63.2 138 32.6
MBI06_g36044_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 4.0e-08 63.2 108 41.7
MSTRG.22175 Avicennia marina HOM05D001657 ORTHO05D001557 5.3e-08 62.8 317 29.3
BraA01t01528Z Brassica rapa HOM05D001657 ORTHO05D001557 5.3e-08 62.8 98 38.8
FvH4_5g35630 Fragaria vesca HOM05D001657 ORTHO05D001557 5.3e-08 62.8 58 55.2
Nitab4.5_0000054g0100 Nicotiana tabacum HOM05D001657 ORTHO05D001557 6.9e-08 62.4 145 35.9
Gohir.D02G085200 Gossypium hirsutum HOM05D001657 ORTHO05D001557 9.0e-08 62.0 78 48.7
PSO170G3375 Papaver somniferum HOM05D001657 ORTHO05D001557 9.0e-08 62.0 107 40.2
TWI12G0338 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 9.0e-08 62.0 278 28.8
Aqoxy2G00389 Aquilegia oxysepala HOM05D001657 ORTHO05D001557 1.2e-07 61.6 88 43.2
Mapoly0008s0253 Marchantia polymorpha HOM05D001657 ORTHO05D001557 1.2e-07 61.6 92 41.3
SGA_v2.0_scaffold427G51509 Striga asiatica HOM05D001657 ORTHO05D001557 1.2e-07 61.6 100 43.0
Lalb_Chr04g0252931 Lupinus albus HOM05D001657 ORTHO05D001557 2.0e-07 60.8 119 37.0
Nitab4.5_0008274g0010 Nicotiana tabacum HOM05D001657 ORTHO05D001557 2.0e-07 60.8 141 38.3
BolC8t48578H Brassica oleracea HOM05D001657 ORTHO05D001557 2.6e-07 60.5 99 36.4
CARHR231980 Cardamine hirsuta HOM05D001657 ORTHO05D001557 2.6e-07 60.5 240 25.0
LjContig00564g0014509 Lotus japonicus HOM05D001657 ORTHO05D001557 2.6e-07 60.5 78 46.2
Eucgr.B03736 Eucalyptus grandis HOM05D001657 ORTHO05D001557 3.4e-07 60.1 79 45.6
Lalb_Chr10g0106231 Lupinus albus HOM05D001657 ORTHO05D001557 3.4e-07 60.1 77 45.5
MBI13_g12111_MAGBIO Magnolia biondii HOM05D001657 ORTHO05D001557 3.4e-07 60.1 92 41.3
Phvul.008G201400 Phaseolus vulgaris HOM05D001657 ORTHO05D001557 3.4e-07 60.1 77 45.5
VMungo0647G0415 Vigna mungo HOM05D001657 ORTHO05D001557 3.4e-07 60.1 77 45.5
ECA246G0321 Erigeron canadensis HOM05D001657 ORTHO05D001557 4.5e-07 59.7 81 42.0
MSTRG.17634 Avicennia marina HOM05D001657 ORTHO05D001557 5.8e-07 59.3 81 44.4
BolC7t45861H Brassica oleracea HOM05D001657 ORTHO05D001557 5.8e-07 59.3 226 27.9
C07p53700 Brassica napus HOM05D001657 ORTHO05D001557 7.6e-07 58.9 226 27.9
Nitab4.5_0001500g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 7.6e-07 58.9 92 41.3
MSTRG.17514 Avicennia marina HOM05D001657 ORTHO05D001557 1.0e-06 58.5 81 43.2
FAN04G0766 Fragaria x ananassa HOM05D001657 ORTHO05D001557 1.0e-06 58.5 80 45.0
Medtr5g089490 Medicago truncatula HOM05D001657 ORTHO05D001557 1.0e-06 58.5 77 44.2
Ca_06195_v3 Cicer arietinum L. HOM05D001657 ORTHO05D001557 1.3e-06 58.2 77 42.9
Gohir.A05G073000 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.3e-06 58.2 92 38.0
Gorai.009G230500 Gossypium raimondii HOM05D001657 ORTHO05D001557 1.3e-06 58.2 113 38.9
Nitab4.5_0003300g0050 Nicotiana tabacum HOM05D001657 ORTHO05D001557 1.3e-06 58.2 296 27.4
RcHm_v2.0_Chr5g0050541 Rosa chinensis HOM05D001657 ORTHO05D001557 1.3e-06 58.2 92 40.2
SalBow2G3097 Salvia bowleyana HOM05D001657 ORTHO05D001557 1.3e-06 58.2 306 27.8
TWI79G1672 Tripterygium wilfordii HOM05D001657 ORTHO05D001557 1.3e-06 58.2 92 41.3
arahy.Tifrunner.gnm1.ann1.P3YD5X Arachis hypogaea HOM05D001657 ORTHO05D001557 1.7e-06 57.8 77 44.2
arahy.Tifrunner.gnm1.ann1.Q6J55I Arachis hypogaea HOM05D001657 ORTHO05D001557 1.7e-06 57.8 77 44.2
CSS0024506 Camellia sinensis var. sinensis HOM05D001657 ORTHO05D001557 1.7e-06 57.8 92 40.2
CiPaw.07G167200 Carya illinoinensis HOM05D001657 ORTHO05D001557 1.7e-06 57.8 82 46.3
Gohir.D05G075900 Gossypium hirsutum HOM05D001657 ORTHO05D001557 1.7e-06 57.8 92 38.0
Gorai.009G077200 Gossypium raimondii HOM05D001657 ORTHO05D001557 1.7e-06 57.8 92 38.0
Lsat_1_v5_gn_2_36480 Lactuca sativa HOM05D001657 ORTHO05D001557 1.7e-06 57.8 80 43.8
Nitab4.5_0000730g0040 Nicotiana tabacum HOM05D001657 ORTHO05D001557 1.7e-06 57.8 92 40.2
ClCG03G012550 Citrullus lanatus HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
MELO3C015111.2 Cucumis melo HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
CsaV3_1G043460 Cucumis sativus L. HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
Eucgr.F02135 Eucalyptus grandis HOM05D001657 ORTHO05D001557 2.2e-06 57.4 323 25.4
FAN16G1246 Fragaria x ananassa HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
FAN21G2843 Fragaria x ananassa HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
FAN25G2363 Fragaria x ananassa HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
MD03G1165400 Malus domestica HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 40.2
MD11G1184700 Malus domestica HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 40.2
Pp3c9_17460 Physcomitrium patens HOM05D001657 ORTHO05D001557 2.2e-06 57.4 93 41.9
Sed0002817 Sechium edule HOM05D001657 ORTHO05D001557 2.2e-06 57.4 92 39.1
Sc01g0001100 Simmondsia chinensis HOM05D001657 ORTHO05D001557 2.2e-06 57.4 101 38.6
MELO3C030106.2 Cucumis melo HOM05D001657 ORTHO05D001557 2.9e-06 57.0 330 24.8
Os07g0658300 Oryza sativa ssp. japonica HOM05D001657 ORTHO05D001557 2.9e-06 57.0 77 44.2
Rhsim13G0209000 Rhododendron simsii HOM05D001657 ORTHO05D001557 2.9e-06 57.0 108 36.1
Glyma.06G094000 Glycine max HOM05D001657 ORTHO05D001557 3.8e-06 56.6 94 38.3
Manes.02G139000 Manihot esculenta HOM05D001657 ORTHO05D001557 3.8e-06 56.6 92 39.1
Nn7g36734 Nelumbo nucifera HOM05D001657 ORTHO05D001557 3.8e-06 56.6 92 40.2
Prupe.4G265200 Prunus persica HOM05D001657 ORTHO05D001557 3.8e-06 56.6 92 40.2
Zm00001eb329690 Zea mays HOM05D001657 ORTHO05D001557 3.8e-06 56.6 77 44.2
CANSAT54G0751 Cannabis sativa HOM05D001657 ORTHO05D001557 4.9e-06 56.2 81 45.7
Lalb_Chr17g0347881 Lupinus albus HOM05D001657 ORTHO05D001557 4.9e-06 56.2 77 42.9
FvH4_3g27830 Fragaria vesca HOM05D001657 ORTHO05D001557 6.5e-06 55.8 92 38.0
FAN11G1403 Fragaria x ananassa HOM05D001657 ORTHO05D001557 6.5e-06 55.8 92 38.0
MSTRG.18463 Avicennia marina HOM05D001657 ORTHO05D001557 8.4e-06 55.5 92 40.2
Ciclev10017928m.g Citrus clementina HOM05D001657 ORTHO05D001557 8.4e-06 55.5 92 38.0
Oeu025906.2 Olea europaea HOM05D001657 ORTHO05D001557 8.4e-06 55.5 92 39.1
Peaxi162Scf00004g04522 Petunia axillaris HOM05D001657 ORTHO05D001557 8.4e-06 55.5 92 39.1
Sopen01g004280 Solanum pennellii HOM05D001657 ORTHO05D001557 8.4e-06 55.5 115 35.7
Sopen11g024440 Solanum pennellii HOM05D001657 ORTHO05D001557 8.4e-06 55.5 92 40.2


User provided reference genes

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