Gene: Sopen11g024440

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g024440
  • Transcript Identifier Sopen11g024440.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 59267009-59310488 : negative

Gene Family Information

  • ID HOM05D001657
  • #Genes/#Species 391/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g024440.1

Descriptions

  • Description Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | Rho GTPase activation protein (RhoGAP) with PH domain | FUNCTIONS IN: Rho GTPase activator activity, phosphoinositide binding | INVOLVED IN: signal transduction | LOCATED IN: chloroplast thylakoid membrane | EXPRESSED IN: guard cell, cultured cell | CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type , Rho GTPase activation protein , Pleckstrin homology , RhoGAP | BEST Arabidopsis thaliana protein match is: Rho GTPase activation protein (RhoGAP) with PH domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009865
ISO
PLAZA Integrative Orthologypollen tube adhesion AT4G24580
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT4G24580
GO:0007165
IEA
InterProsignal transduction
GO:0009920
ISO
PLAZA Integrative Orthologycell plate formation involved in plant-type cell wall biogenesis AT5G12150
GO:0043547
ISO
PLAZA Integrative Orthologypositive regulation of GTPase activity AT4G24580
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT4G24580
GO:0090630
ISO
PLAZA Integrative Orthologyactivation of GTPase activity AT4G24580
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT4G24580
GO:0035024
ISO
PLAZA Integrative Orthologynegative regulation of Rho protein signal transduction AT4G24580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031267
ISO
PLAZA Integrative Orthologysmall GTPase binding AT4G24580
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12150
GO:0005096
ISO
PLAZA Integrative OrthologyGTPase activator activity AT4G24580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT4G24580
GO:0016324
ISO
PLAZA Integrative Orthologyapical plasma membrane AT4G24580
GO:0005938
ISO
PLAZA Integrative Orthologycell cortex AT4G24580
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G12150
GO:0045177
ISO
PLAZA Integrative Orthologyapical part of cell AT4G24580
GO:0030139
ISO
PLAZA Integrative Orthologyendocytic vesicle AT4G24580
GO:0070382
ISO
PLAZA Integrative Orthologyexocytic vesicle AT4G24580
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G19390
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G12150
GO:0009574
ISO
PLAZA Integrative Orthologypreprophase band AT5G12150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001849 Pleckstrin homology domain
IPR008936 Rho GTPase activation protein
IPR025757 Ternary complex factor MIP1, leucine-zipper
IPR011993 PH-like domain superfamily
IPR000198 Rho GTPase-activating protein domain
Mapman id Description
27.4.2 Multi-process regulation.Rop-GTPase regulatory system.ROP-activating protein (RopGAP)