Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.7e-253 877.1 439 100.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.4e-195 685.6 430 80.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.3e-188 663.3 439 74.3
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.4e-187 659.8 436 74.8
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.2e-187 658.7 436 74.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.1e-186 656.0 421 77.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 2.1e-186 656.0 433 76.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 7.8e-186 654.1 458 73.6
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 5.1e-185 651.4 422 75.4
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 6.6e-185 651.0 418 75.8
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.1e-184 650.2 431 74.9
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.1e-184 650.2 431 74.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.5e-184 649.8 423 76.4
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 4.3e-184 648.3 431 74.0
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 5.6e-184 647.9 431 74.7
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 7.3e-184 647.5 421 76.7
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.1e-183 646.0 423 73.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.8e-183 645.6 431 73.8
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 8.1e-183 644.0 433 73.2
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.8e-182 642.9 433 72.5
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.8e-182 642.9 421 76.0
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.4e-182 642.5 423 74.9
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 3.1e-182 642.1 432 73.6
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.6e-181 639.0 439 70.8
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.4e-181 638.6 439 70.6
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 5.8e-181 637.9 433 72.1
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.2e-180 636.0 422 75.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.2e-180 636.0 431 73.5
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 4.9e-180 634.8 437 72.3
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 1.4e-179 633.3 435 72.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.2e-179 632.1 431 72.6
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.4e-179 631.3 431 72.9
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.2e-178 630.2 422 73.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.5e-178 628.6 431 72.4
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 4.6e-178 628.2 422 72.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 6.0e-178 627.9 451 70.5
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 7.8e-178 627.5 423 73.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.3e-177 626.7 462 68.4
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.3e-177 626.7 423 73.3
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.3e-177 626.7 431 71.9
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 5.1e-177 624.8 433 71.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 6.6e-177 624.4 443 71.6
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 8.7e-177 624.0 431 71.7
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.3e-176 622.1 440 70.7
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.3e-176 622.1 440 70.7
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 5.6e-176 621.3 424 73.3
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 5.6e-176 621.3 424 73.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 5.6e-176 621.3 433 70.0
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 7.3e-176 620.9 431 71.2
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 6.2e-175 617.8 454 68.5
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 6.9e-174 614.4 431 69.6
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 9.0e-174 614.0 431 70.1
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 2.6e-173 612.5 420 71.9
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.4e-173 612.1 431 69.8
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.2e-172 609.4 414 71.7
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 2.2e-172 609.4 431 71.0
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 2.2e-172 609.4 548 59.7
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.8e-172 608.6 431 69.4
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 6.4e-172 607.8 438 68.9
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.1e-171 607.1 431 69.8
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.9e-171 606.3 423 69.7
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 5.4e-171 604.7 423 70.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 5.4e-171 604.7 429 70.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.4e-171 604.7 438 68.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 5.4e-171 604.7 434 68.9
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 7.1e-171 604.4 433 69.3
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 9.3e-171 604.0 436 68.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.6e-170 603.2 437 69.3
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 2.1e-170 602.8 432 68.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 3.5e-170 602.1 431 69.8
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 6.0e-170 601.3 423 70.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.3e-169 600.1 427 69.6
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.3e-169 600.1 429 70.2
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.3e-169 599.4 432 67.8
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.3e-169 599.4 423 70.9
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.9e-169 598.6 436 67.9
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.1e-169 598.2 429 69.9
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.1e-169 598.2 423 69.3
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.7e-169 597.4 429 69.9
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.5e-168 596.7 426 69.7
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.5e-168 596.7 485 62.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.9e-168 596.3 439 68.1
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.9e-168 596.3 421 69.6
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 3.3e-168 595.5 423 69.7
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 4.3e-168 595.1 423 69.7
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 5.6e-168 594.7 423 70.0
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 5.6e-168 594.7 423 69.7
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.8e-167 592.4 422 70.1
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.1e-166 590.5 423 68.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.4e-166 590.1 422 67.8
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.4e-166 590.1 415 72.3
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 4.5e-165 585.1 422 67.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.6e-165 584.3 427 67.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-164 582.4 435 65.7
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.4e-163 580.1 439 64.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.8e-161 573.2 442 66.7
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.2e-157 560.5 435 64.8
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.6e-154 550.1 435 63.9
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.0e-153 547.4 439 61.3
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.4e-152 541.2 417 65.2
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 3.2e-147 525.8 425 62.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 5.7e-144 515.0 336 76.5
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.0e-140 504.2 357 70.0
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 9.7e-136 487.6 423 59.6
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 6.3e-135 485.0 431 55.9
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.1e-134 484.2 437 58.8
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.1e-134 482.6 424 57.1
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.1e-128 464.2 424 55.0
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.1e-126 457.6 307 72.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 3.1e-126 456.1 425 53.4
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 7.0e-126 454.9 282 78.7
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-123 447.6 352 67.0
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.3e-121 439.9 428 56.3
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 7.0e-118 428.3 426 49.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.8e-116 422.5 278 75.2
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-107 394.0 422 51.9
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 2.1e-85 320.5 194 80.9
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 7.8e-85 318.5 448 41.3
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 8.9e-73 278.5 236 58.5
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.3e-68 263.8 184 72.3
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-66 258.1 292 50.3
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 2.8e-50 203.8 138 73.9
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.9e-32 142.9 99 68.7
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 3.3e-27 127.1 91 62.6
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.7e-26 124.8 91 64.8
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.6e-24 117.5 89 61.8
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.2e-14 83.6 364 24.5
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 1.3e-10 72.0 91 45.1
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.6e-08 65.1 41 73.2


User provided reference genes

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