Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C52T7 Lonicera japonica HOM05D000004 ORTHO05D000002 1.8e-112 409.5 231 100.0
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 9.0e-40 167.9 231 42.0
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 6.7e-27 125.2 98 56.1
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 2.4e-24 116.7 92 55.4
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.7e-20 103.2 88 43.2
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.9e-18 97.1 88 43.2
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-16 89.7 96 40.6
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 9.0e-16 88.2 89 42.7
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-15 85.5 111 38.7
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.6e-15 85.1 234 27.4
Lj7C565T3 Lonicera japonica HOM05D000004 ORTHO05D000002 1.0e-14 84.7 107 37.4
PSO478G1420 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-14 84.7 113 35.4
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 1.7e-14 84.0 91 36.3
PSO210G7018 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-14 84.0 145 31.0
PSO675G9204 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-14 82.8 90 37.8
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-14 82.4 102 39.2
PSO170G5728 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-14 82.4 91 39.6
PSO210G1314 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-14 82.4 88 40.9
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-14 82.4 88 38.6
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-14 82.4 101 39.6
PSO782G4522 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-14 82.0 94 37.2
PSO478G3301 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-14 81.6 90 35.6
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-13 80.5 87 40.2
PSO339G0831 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-13 80.5 88 37.5
PSO675G3155 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-13 79.7 90 37.8
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-13 79.7 91 37.4
PSO210G0982 Papaver somniferum HOM05D000004 ORTHO05D000002 7.1e-13 78.6 88 37.5
Lj2C32T8 Lonicera japonica HOM05D000004 ORTHO05D000002 9.3e-13 78.2 123 33.3
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 9.3e-13 78.2 91 34.1
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-12 77.8 90 33.3
PSO675G9263 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-12 77.8 130 30.8
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-12 77.8 90 33.3
PSO063G3877 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-12 77.4 113 32.7
PSO675G3806 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-12 77.4 90 34.4
PSO017G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 114 33.3
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 113 31.0
PSO384G3277 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 90 35.6
PSO478G3389 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 90 38.9
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 90 38.9
PSO017G3809 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-12 76.6 90 36.7
PSO063G0124 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-12 76.3 89 40.4
PSO170G3746 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-12 75.9 81 37.0
PSO063G3882 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-12 75.5 90 34.4
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-12 75.1 90 33.3
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-12 75.1 122 32.0
AUR62022484 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.0e-11 74.7 89 38.2
AUR62041613 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.0e-11 74.7 89 39.3
PSO210G0641 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 97 33.0
PSO339G1576 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 90 33.3
PSO478G0477 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 74.3 90 32.2
PSO210G6199 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-11 73.9 88 36.4
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.8e-11 73.9 88 35.2
PSO782G2672 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-11 73.6 90 33.3
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-11 73.2 98 35.7
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-11 73.2 90 35.6
AUR62033910 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.1e-11 72.4 89 37.1
PSO384G4066 Papaver somniferum HOM05D000004 ORTHO05D000002 6.7e-11 72.0 90 32.2
PSO541G4684 Papaver somniferum HOM05D000004 ORTHO05D000002 6.7e-11 72.0 90 33.3
Lju41C59T6 Lonicera japonica HOM05D000004 ORTHO05D000002 8.7e-11 71.6 90 36.7
PSO675G5993 Papaver somniferum HOM05D000004 ORTHO05D000002 8.7e-11 71.6 90 30.0
PSO675G6875 Papaver somniferum HOM05D000004 ORTHO05D000002 8.7e-11 71.6 121 29.8
Ah.01g012990 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.1e-10 71.2 127 30.7
AUR62033568 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.1e-10 71.2 89 34.8
PSO675G6766 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-10 71.2 125 26.4
AUR62037042 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.5e-10 70.9 89 37.1
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-10 70.9 90 35.6
Sopen06g014540 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-10 70.5 89 33.7
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.5e-10 70.1 90 34.4
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-10 70.1 90 32.2
PSO675G5638 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-10 70.1 87 34.5
AUR62029367 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.3e-10 69.7 90 36.7
Lj2A890T24 Lonicera japonica HOM05D000004 ORTHO05D000002 3.3e-10 69.7 96 33.3
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-10 69.7 90 28.9
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-10 69.7 121 30.6
Ah.16g109500 Amaranthus hybridus HOM05D000004 ORTHO05D000002 4.3e-10 69.3 88 35.2
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-10 69.3 109 32.1
PSO339G1921 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-10 69.3 90 32.2
PSO461G0041 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-10 69.3 90 33.3
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 4.3e-10 69.3 109 32.1
AUR62006479 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.7e-10 68.9 90 33.3
PSO063G4254 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-10 68.9 109 31.2
PSO455G0227 Papaver somniferum HOM05D000004 ORTHO05D000002 7.4e-10 68.6 90 31.1
PSO063G2903 Papaver somniferum HOM05D000004 ORTHO05D000002 9.7e-10 68.2 90 31.1
AUR62029366 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-09 67.8 90 35.6
AUR62031087 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-09 67.8 89 32.6
Lj6C451T1 Lonicera japonica HOM05D000004 ORTHO05D000002 1.3e-09 67.8 96 35.4
PSO063G2309 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-09 67.8 90 30.0
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-09 67.8 90 30.0
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-09 67.4 98 30.6
PSO339G1607 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 67.4 90 30.0
PSO591G0288 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 67.4 84 36.9
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-09 66.6 91 33.0
PSO063G1275 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-09 66.6 108 33.3
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 3.7e-09 66.2 114 29.8
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-09 66.2 91 34.1
PSO170G6288 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-09 66.2 87 31.0
AUR62003126 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.8e-09 65.9 89 34.8
AUR62007189 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.8e-09 65.9 91 35.2
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 6.3e-09 65.5 81 37.0
AUR62026331 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.3e-09 65.5 91 35.2
AUR62016413 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.2e-09 65.1 89 36.0
Sopen05g018990 Solanum pennellii HOM05D000002 ORTHO05D000002 8.2e-09 65.1 89 34.8
Manes.11G082735 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-08 64.7 92 31.5
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.4e-08 64.3 89 33.7
Ah.03g143850 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.8e-08 63.9 97 35.1
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-08 63.9 94 29.8
Nitab4.5_0001387g0070 Nicotiana tabacum HOM05D010703 ORTHO05D014545 1.8e-08 63.9 91 35.2
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.9 90 35.6
PSO541G1232 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-08 63.5 85 32.9
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-08 63.2 98 33.7
AUR62007521 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.1e-08 63.2 91 35.2
AUR62037448 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.1e-08 63.2 89 33.7
Sabra10G0044500 Salix brachista HOM05D000075 ORTHO05D000002 3.1e-08 63.2 114 31.6
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 3.1e-08 63.2 108 35.2
Lj4C143T12 Lonicera japonica HOM05D000004 ORTHO05D000002 4.1e-08 62.8 74 39.2
COL.COLO4_33476 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.3e-08 62.4 92 32.6
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 62.4 94 30.9
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-08 62.4 110 30.0
Ah.07g198610 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.9e-08 62.0 89 32.6
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-08 62.0 94 30.9
ECA236G2364 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-08 62.0 98 27.6
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-08 62.0 92 34.8
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-08 62.0 92 34.8
Ah.04g156790 Amaranthus hybridus HOM05D000004 ORTHO05D000002 9.0e-08 61.6 89 31.5
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 9.0e-08 61.6 87 32.2
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.2e-07 61.2 56 42.9
PSO724G0511 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 61.2 62 40.3
PSO782G2503 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 61.2 90 30.0
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 99 28.3
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 1.5e-07 60.8 114 29.8
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.8 89 33.7
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 2.0e-07 60.5 97 27.8
Nitab4.5_0004579g0050 Nicotiana tabacum HOM05D000004 ORTHO05D000002 2.0e-07 60.5 94 33.0
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-07 60.5 87 31.0
CAN.G1012.10 Capsicum annuum HOM05D000004 ORTHO05D002107 2.6e-07 60.1 88 31.8
Lj3C585T21 Lonicera japonica HOM05D013013 ORTHO05D000002 2.6e-07 60.1 74 35.1
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-07 60.1 54 42.6
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-07 59.7 102 30.4
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 4.5e-07 59.3 89 32.6
Manes.14G155101 Manihot esculenta HOM05D016502 ORTHO05D019286 4.5e-07 59.3 90 33.3
PSO210G0561 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-07 59.3 60 41.7
Sabra16G0137300 Salix brachista HOM05D000004 ORTHO05D000002 4.5e-07 59.3 75 37.3
Sopen01g013800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-07 59.3 89 33.7
AUR62030093 Chenopodium quinoa HOM05D000349 ORTHO05D000002 5.9e-07 58.9 93 33.3
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.7e-07 58.5 88 33.0
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-07 58.5 94 27.7
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-07 58.5 94 27.7
PSO384G4983 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-07 58.5 90 30.0
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.0e-06 58.2 77 37.7
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.0e-06 58.2 90 31.1
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.0e-06 58.2 103 26.2
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-06 58.2 101 25.7
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.0e-06 58.2 94 31.9
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.3e-06 57.8 121 30.6
Psat5g116760 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-06 57.8 91 35.2
CAN.G1646.4 Capsicum annuum HOM05D018515 ORTHO05D002107 1.7e-06 57.4 82 31.7
PSO832G0754 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-06 57.4 86 26.7
Psat5g069760 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-06 57.4 91 35.2
ECA248G1502 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-06 57.0 95 27.4
Lj8C412T6 Lonicera japonica HOM05D000004 ORTHO05D000002 2.2e-06 57.0 64 31.2
Manes.16G043152 Manihot esculenta HOM05D016502 ORTHO05D019286 2.2e-06 57.0 91 29.7
PSO832G2519 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-06 57.0 68 32.4
AUR62026940 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.9e-06 56.6 72 36.1
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-06 56.6 95 29.5
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-06 56.6 95 30.5
Sabra09G0078600 Salix brachista HOM05D000004 ORTHO05D000002 3.8e-06 56.2 104 29.8
Sabra10G0166600 Salix brachista HOM05D000004 ORTHO05D000002 3.8e-06 56.2 104 29.8
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.0e-06 55.8 88 30.7
COL.COLO4_36867 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.0e-06 55.8 114 27.2
Manes.05G186755 Manihot esculenta HOM05D000004 ORTHO05D000002 5.0e-06 55.8 83 31.3
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.0e-06 55.8 113 31.0
AUR62042688 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.5e-06 55.5 72 31.9
AUR62044430 Chenopodium quinoa HOM05D002361 ORTHO05D000002 6.5e-06 55.5 72 33.3
ECA234G4714 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-06 55.5 94 26.6
Lj4P831T53 Lonicera japonica HOM05D013013 ORTHO05D000002 6.5e-06 55.5 67 32.8
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 6.5e-06 55.5 101 28.7
Ah.01g010230 Amaranthus hybridus HOM05D000004 ORTHO05D017249 8.5e-06 55.1 88 30.7
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.5e-06 55.1 101 29.7
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.5e-06 55.1 94 24.5
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.5e-06 55.1 94 29.8
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 8.5e-06 55.1 90 30.0
Sabra07G0076600 Salix brachista HOM05D000004 ORTHO05D000002 8.5e-06 55.1 118 28.8
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 8.5e-06 55.1 94 28.7
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-06 55.1 94 28.7


User provided reference genes

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