Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 1.3e-131 473.0 236 100.0
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 1.7e-78 296.6 308 57.8
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 1.6e-55 220.3 310 47.1
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.6e-55 219.5 310 45.5
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 8.5e-54 214.5 309 44.3
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 1.1e-53 214.2 311 45.7
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 2.5e-53 213.0 311 45.3
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 7.2e-53 211.5 308 44.5
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 9.4e-53 211.1 310 44.2
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 9.4e-53 211.1 287 48.1
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 1.6e-52 210.3 309 44.7
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 2.1e-52 209.9 311 43.7
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.7e-52 209.5 287 47.7
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 4.7e-52 208.8 310 45.2
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 4.7e-52 208.8 331 42.9
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 6.1e-52 208.4 317 45.1
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 3.0e-51 206.1 312 45.8
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 4.0e-51 205.7 310 45.2
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 5.2e-51 205.3 309 43.7
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 5.2e-51 205.3 311 45.3
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 8.8e-51 204.5 311 44.4
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 1.5e-50 203.8 310 45.2
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 1.5e-50 203.8 309 43.7
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.5e-50 203.8 311 45.0
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 1.5e-50 203.8 311 45.0
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.5e-50 203.8 311 44.1
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 2.0e-50 203.4 309 44.7
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 2.6e-50 203.0 221 55.2
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.6e-50 203.0 311 44.7
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 2.6e-50 203.0 313 43.8
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 7.5e-50 201.4 310 42.6
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 1.3e-49 200.7 307 46.3
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 1.7e-49 200.3 311 42.1
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.7e-49 200.3 309 44.3
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 2.2e-49 199.9 310 44.2
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 2.2e-49 199.9 311 44.1
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 2.8e-49 199.5 315 41.6
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.8e-49 199.5 311 44.7
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 2.8e-49 199.5 309 46.9
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 4.8e-49 198.7 310 44.2
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 6.3e-49 198.4 309 43.4
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 6.3e-49 198.4 309 45.3
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.1e-48 197.6 311 45.3
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 1.1e-48 197.6 313 43.5
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.4e-48 197.2 305 45.2
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 1.4e-48 197.2 307 44.0
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 1.4e-48 197.2 310 44.2
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 1.8e-48 196.8 309 43.0
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 2.4e-48 196.4 309 44.0
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 3.1e-48 196.1 312 44.2
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 3.1e-48 196.1 319 43.9
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 3.1e-48 196.1 311 43.7
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 4.1e-48 195.7 299 44.1
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 4.1e-48 195.7 310 45.5
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 5.4e-48 195.3 313 45.0
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 9.1e-48 194.5 301 44.5
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 1.2e-47 194.1 306 43.8
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.6e-47 193.7 304 45.1
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 2.0e-47 193.4 311 43.1
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 2.0e-47 193.4 312 41.7
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 2.7e-47 193.0 314 45.2
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 3.5e-47 192.6 302 43.7
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 3.5e-47 192.6 302 43.7
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 3.5e-47 192.6 302 44.7
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 3.5e-47 192.6 304 42.1
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 4.5e-47 192.2 311 45.7
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 7.7e-47 191.4 313 44.1
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 1.3e-46 190.7 301 44.2
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.3e-46 190.7 313 44.4
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 1.3e-46 190.7 309 43.7
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.3e-46 190.7 317 41.6
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 1.7e-46 190.3 311 41.5
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.7e-46 190.3 178 57.9
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 2.2e-46 189.9 313 41.9
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 3.8e-46 189.1 313 44.1
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 3.8e-46 189.1 310 42.9
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 6.5e-46 188.3 310 43.2
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 6.5e-46 188.3 308 42.5
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 8.5e-46 188.0 311 42.8
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 1.1e-45 187.6 310 42.3
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.1e-45 187.6 312 42.0
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 1.5e-45 187.2 310 42.3
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.5e-45 187.2 312 42.3
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 1.5e-45 187.2 307 43.6
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 1.9e-45 186.8 310 40.6
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 2.5e-45 186.4 312 42.0
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 3.2e-45 186.0 309 42.7
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 5.5e-45 185.3 314 41.4
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 1.6e-44 183.7 310 40.6
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 1.6e-44 183.7 307 41.4
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 2.1e-44 183.3 301 42.9
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 2.1e-44 183.3 325 40.6
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.7e-44 183.0 203 55.2
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 4.7e-44 182.2 301 42.9
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 6.1e-44 181.8 178 58.4
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 1.0e-43 181.0 312 41.7
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.4e-43 180.6 301 42.5
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 6.8e-43 178.3 304 39.5
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 8.8e-43 177.9 311 40.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 7.5e-42 174.9 277 43.3
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 2.2e-41 173.3 184 54.9
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 2.0e-39 166.8 177 49.2
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 2.0e-39 166.8 180 53.3
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.0e-38 164.5 181 54.7
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 1.3e-38 164.1 181 54.7
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 6.6e-38 161.8 177 49.7
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 8.0e-36 154.8 179 48.6
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.8e-35 153.7 162 56.8
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 2.3e-35 153.3 301 37.5
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 2.6e-34 149.8 231 43.7
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 2.2e-33 146.7 299 37.8
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 4.9e-33 145.6 152 56.6
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 3.2e-32 142.9 157 50.3
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 4.6e-31 139.0 150 51.3
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.0e-30 136.3 138 52.9
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.0e-30 136.3 138 52.9
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 1.5e-29 134.0 135 55.6
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.9e-29 133.7 155 52.3
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 3.3e-29 132.9 182 43.4
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 1.3e-25 120.9 120 60.0
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 3.9e-22 109.4 119 53.8
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 7.3e-21 105.1 117 50.4
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 7.3e-13 78.6 54 75.9
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 1.4e-11 74.3 43 81.4
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 1.2e-10 71.2 182 31.9
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 2.1e-07 60.5 35 82.9
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 5.1e-06 55.8 130 34.6
Sabra05G0098800 Salix brachista HOM05D004674 ORTHO05D349121 6.6e-06 55.5 52 59.6


User provided reference genes

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