Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A814G50 Lonicera japonica HOM05D001141 ORTHO05D024843 7.2e-37 156.8 80 100.0
Hma1.2p1_1877F.1_g306320 Hydrangea macrophylla HOM05D001141 ORTHO05D001088 8.2e-17 90.1 72 63.9
Dinv09862 Davidia involucrata HOM05D001141 ORTHO05D001088 1.2e-15 86.3 72 63.9
GSVIVG01023839001 Vitis vinifera HOM05D001141 ORTHO05D001088 7.7e-15 83.6 78 57.7
DCAR_013350 Daucus carota HOM05D001141 ORTHO05D024843 3.2e-13 78.2 77 51.9
DCAR_013351 Daucus carota HOM05D001141 ORTHO05D001088 3.2e-13 78.2 77 51.9
GSVIVG01030885001 Vitis vinifera HOM05D001141 ORTHO05D001088 9.4e-13 76.6 78 52.6
vmacro21733 Vaccinium macrocarpon HOM05D001141 ORTHO05D024843 1.6e-12 75.9 77 58.4
PGSC0003DMG400029646 Solanum tuberosum HOM05D001141 ORTHO05D001088 2.1e-12 75.5 72 54.2
Peaxi162Scf00047g01232 Petunia axillaris HOM05D001141 ORTHO05D001088 6.1e-12 73.9 74 52.7
Cpa.g.sc63.33 Carica papaya HOM05D001141 ORTHO05D024843 2.3e-11 72.0 73 52.1
Potri.009G170700 Populus trichocarpa HOM05D001141 ORTHO05D001088 3.0e-11 71.6 77 54.5
Cc07_g18850 Coffea canephora HOM05D001141 ORTHO05D001088 5.2e-11 70.9 77 50.6
Actinidia15536 Actinidia chinensis HOM05D001141 ORTHO05D001088 6.7e-11 70.5 77 51.9
Actinidia17098 Actinidia chinensis HOM05D001141 ORTHO05D001088 6.7e-11 70.5 76 55.3
Nitab4.5_0002284g0020 Nicotiana tabacum HOM05D001141 ORTHO05D001088 6.7e-11 70.5 74 48.6
Nitab4.5_0011776g0010 Nicotiana tabacum HOM05D001141 ORTHO05D001088 6.7e-11 70.5 74 48.6
Atru.chr10.102 Acer truncatum HOM05D001141 ORTHO05D001088 2.0e-10 68.9 78 53.8
Atru.chr10.121 Acer truncatum HOM05D001141 ORTHO05D001088 2.0e-10 68.9 78 53.8
CAN.G500.92 Capsicum annuum HOM05D001141 ORTHO05D001088 2.0e-10 68.9 74 47.3
DCAR_013349 Daucus carota HOM05D001141 ORTHO05D001088 2.0e-10 68.9 75 50.7
TAR381G0382 Trochodendron aralioides HOM05D001141 ORTHO05D001088 2.0e-10 68.9 77 54.5
CiPaw.05G096100 Carya illinoinensis HOM05D001141 ORTHO05D001088 3.3e-10 68.2 73 52.1
Solyc09g091440.3 Solanum lycopersicum HOM05D001141 ORTHO05D001088 4.4e-10 67.8 72 51.4
Sopen09g034370 Solanum pennellii HOM05D001141 ORTHO05D001088 4.4e-10 67.8 72 51.4
TWI75G0513 Tripterygium wilfordii HOM05D001141 ORTHO05D001088 5.7e-10 67.4 77 51.9
Manes.03G095900 Manihot esculenta HOM05D001141 ORTHO05D001088 2.2e-09 65.5 77 49.4
Rhsim06G0000400 Rhododendron simsii HOM05D001141 ORTHO05D001088 3.7e-09 64.7 77 54.5
Thecc.02G149900 Theobroma cacao HOM05D001141 ORTHO05D001088 1.4e-08 62.8 76 50.0
PGR142G2255 Punica granatum HOM05D001141 ORTHO05D001088 7.0e-08 60.5 77 46.8
Ciclev10028261m.g Citrus clementina HOM05D001141 ORTHO05D001088 9.1e-08 60.1 76 47.4
Nn5g31097 Nelumbo nucifera HOM05D001141 ORTHO05D001088 2.7e-07 58.5 79 46.8
Dinv05519 Davidia involucrata HOM05D001141 ORTHO05D001088 3.5e-07 58.2 44 63.6
Gorai.002G014800 Gossypium raimondii HOM05D001141 ORTHO05D001088 4.5e-07 57.8 71 47.9
MD05G1146000 Malus domestica HOM05D001141 ORTHO05D001088 4.5e-07 57.8 77 46.8
Potri.004G209800 Populus trichocarpa HOM05D001141 ORTHO05D001088 4.5e-07 57.8 73 46.6
Sc09g0004820 Simmondsia chinensis HOM05D001141 ORTHO05D001088 4.5e-07 57.8 78 52.6
Duzib132G0531 Durio zibethinus HOM05D001141 ORTHO05D001088 5.9e-07 57.4 77 48.1
MD10G1145400 Malus domestica HOM05D001141 ORTHO05D001088 5.9e-07 57.4 77 45.5
Sabra04G0141500 Salix brachista HOM05D001141 ORTHO05D001088 5.9e-07 57.4 74 44.6
COL.COLO4_10145 Corchorus olitorius HOM05D001141 ORTHO05D001088 1.0e-06 56.6 77 40.3
Duzib248G1575 Durio zibethinus HOM05D001141 ORTHO05D001088 2.2e-06 55.5 77 46.8
FAN27G2192 Fragaria x ananassa HOM05D001141 ORTHO05D001088 2.2e-06 55.5 79 50.6
Gohir.A01G011800 Gossypium hirsutum HOM05D001141 ORTHO05D001088 2.2e-06 55.5 77 48.1
Gohir.D01G013000 Gossypium hirsutum HOM05D001141 ORTHO05D001088 2.2e-06 55.5 77 48.1
FAN15G2245 Fragaria x ananassa HOM05D001141 ORTHO05D001088 2.9e-06 55.1 79 50.6


User provided reference genes

Program Settings