Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A136T86 Lonicera japonica HOM05D000395 ORTHO05D000088 1.1e-74 283.1 133 100.0
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 1.9e-26 122.9 115 53.9
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 1.2e-25 120.2 117 52.1
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 4.7e-25 118.2 115 52.2
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 8.0e-25 117.5 127 48.8
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 1.1e-21 107.1 118 47.5
Lj4C136T19 Lonicera japonica HOM05D000395 ORTHO05D000088 1.0e-19 100.5 125 45.6
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 2.5e-18 95.9 108 45.4
Lj2A600G55 Lonicera japonica HOM05D000395 ORTHO05D000088 5.5e-18 94.7 115 40.9
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 1.0e-16 90.5 132 38.6
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 2.6e-15 85.9 123 38.2
vmacro16013 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 4.1e-13 78.6 117 37.6
Lj2A564G40 Lonicera japonica HOM05D000395 ORTHO05D000088 1.6e-12 76.6 85 50.6
Lj4A136T87 Lonicera japonica HOM05D000395 ORTHO05D000088 1.0e-11 73.9 91 46.2
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.0e-11 73.9 119 37.8
Eucgr.G00890 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.3e-11 73.6 105 39.0
Eucgr.G01245 Eucalyptus grandis HOM05D000395 ORTHO05D000088 3.9e-11 72.0 101 39.6
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 6.6e-11 71.2 126 34.1
Eucgr.G00888 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.9e-10 69.7 104 36.5
Eucgr.G00889 Eucalyptus grandis HOM05D000395 ORTHO05D000088 4.3e-10 68.6 108 35.2
RcHm_v2.0_Chr2g0103541 Rosa chinensis HOM05D000395 ORTHO05D000088 5.6e-10 68.2 113 33.6
Manes.07G115300 Manihot esculenta HOM05D000395 ORTHO05D000088 9.5e-10 67.4 116 34.5
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.2e-09 67.0 93 31.2
FvH4_1g14680 Fragaria vesca HOM05D000395 ORTHO05D000088 2.1e-09 66.2 117 33.3
Eucgr.G01240 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.8e-09 65.9 99 36.4
QL06p043952 Quercus lobata HOM05D000395 ORTHO05D000088 2.8e-09 65.9 132 31.8
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 6.1e-09 64.7 93 31.2
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 6.1e-09 64.7 93 31.2
Prupe.7G143800 Prunus persica HOM05D000395 ORTHO05D000088 1.0e-08 63.9 115 33.0
RcHm_v2.0_Chr2g0103491 Rosa chinensis HOM05D000395 ORTHO05D000088 1.0e-08 63.9 119 32.8
arahy.Tifrunner.gnm1.ann1.TU4N0L Arachis hypogaea HOM05D000395 ORTHO05D000088 1.4e-08 63.5 100 38.0
CSS0034604 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 1.8e-08 63.2 104 37.5
PGR102G2424 Punica granatum HOM05D000395 ORTHO05D000088 1.8e-08 63.2 106 38.7
Lalb_Chr10g0095161 Lupinus albus HOM05D000395 ORTHO05D000088 2.3e-08 62.8 112 36.6
Manes.10G033500 Manihot esculenta HOM05D000395 ORTHO05D000088 2.3e-08 62.8 95 34.7
Phvul.007G019500 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 2.3e-08 62.8 90 28.9
FvH4_6g38700 Fragaria vesca HOM05D000395 ORTHO05D000088 3.1e-08 62.4 106 35.8
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-08 62.4 106 35.8
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-08 62.4 109 27.5
GSVIVG01005087001 Vitis vinifera HOM05D000395 ORTHO05D000088 4.0e-08 62.0 101 35.6
Gohir.A12G067300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.8e-08 61.2 121 33.1
Lalb_Chr06g0163601 Lupinus albus HOM05D000395 ORTHO05D000088 6.8e-08 61.2 87 37.9
Aqoxy1G00852 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 8.9e-08 60.8 97 40.2
arahy.Tifrunner.gnm1.ann1.66D6IA Arachis hypogaea HOM05D000395 ORTHO05D000088 1.2e-07 60.5 100 37.0
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 1.2e-07 60.5 123 34.1
Eucgr.G01241 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.2e-07 60.5 108 35.2
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 1.2e-07 60.5 124 32.3
Glyma.09G114900 Glycine max HOM05D000395 ORTHO05D000088 1.5e-07 60.1 119 32.8
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 2.0e-07 59.7 124 34.7
Lj7A19G27 Lonicera japonica HOM05D000395 ORTHO05D000088 2.0e-07 59.7 101 36.6
Lj2g0004829 Lotus japonicus HOM05D000395 ORTHO05D000088 2.0e-07 59.7 123 31.7
Lj5g0017900 Lotus japonicus HOM05D000212 ORTHO05D005509 2.0e-07 59.7 82 36.6
Glyma.09G117200 Glycine max HOM05D000395 ORTHO05D000088 2.6e-07 59.3 119 30.3
Glyma.10G281250 Glycine max HOM05D000395 ORTHO05D000088 2.6e-07 59.3 90 32.2
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 2.6e-07 59.3 108 32.4
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 2.6e-07 59.3 101 36.6
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 2.6e-07 59.3 108 32.4
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 2.6e-07 59.3 107 35.5
TWI09G1538 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 2.6e-07 59.3 85 35.3
CSS0012662 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 3.4e-07 58.9 89 33.7
Lalb_Chr10g0095151 Lupinus albus HOM05D000395 ORTHO05D000088 3.4e-07 58.9 109 32.1
PGR102G2512 Punica granatum HOM05D000395 ORTHO05D000088 3.4e-07 58.9 106 37.7
Gohir.D12G067800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.4e-07 58.5 120 32.5
Gorai.008G071200 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.4e-07 58.5 120 32.5
Prupe.7G143500 Prunus persica HOM05D000395 ORTHO05D000088 4.4e-07 58.5 81 39.5
Prupe.7G144200 Prunus persica HOM05D000395 ORTHO05D000088 4.4e-07 58.5 108 35.2
CANSAT01G1838 Cannabis sativa HOM05D000395 ORTHO05D000088 5.8e-07 58.2 100 32.0
Gohir.1Z049472 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.8e-07 58.2 108 31.5
Lj2C565T10 Lonicera japonica HOM05D000395 ORTHO05D000088 5.8e-07 58.2 73 47.9
Manes.13G130950 Manihot esculenta HOM05D000395 ORTHO05D000088 7.5e-07 57.8 105 35.2
CANSAT01G3184 Cannabis sativa HOM05D000395 ORTHO05D000088 9.8e-07 57.4 104 38.5
Phvul.003G033400 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 9.8e-07 57.4 96 31.2
TAR376G0237 Trochodendron aralioides HOM05D000823 ORTHO05D000088 9.8e-07 57.4 121 28.1
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 1.3e-06 57.0 123 33.3
COL.COLO4_30629 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.3e-06 57.0 99 37.4
Glyma.10G281300 Glycine max HOM05D000395 ORTHO05D000088 1.3e-06 57.0 126 34.9
Prupe.7G143700 Prunus persica HOM05D000395 ORTHO05D000088 1.3e-06 57.0 114 34.2
Thecc.01G047100 Theobroma cacao HOM05D000395 ORTHO05D000088 1.3e-06 57.0 121 30.6
VMungo0720G0704 Vigna mungo HOM05D000395 ORTHO05D000088 1.3e-06 57.0 78 38.5
Lj2P565T31 Lonicera japonica HOM05D000395 ORTHO05D000088 1.7e-06 56.6 80 38.8
COL.COLO4_25173 Corchorus olitorius HOM05D000395 ORTHO05D000088 2.2e-06 56.2 124 37.1
Phvul.007G019600 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 2.2e-06 56.2 105 35.2
Prupe.1G579400 Prunus persica HOM05D000395 ORTHO05D000088 2.2e-06 56.2 95 33.7
PGR044G2084 Punica granatum HOM05D000823 ORTHO05D000088 2.2e-06 56.2 106 27.4
TWI09G0236 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 2.2e-06 56.2 123 29.3
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 3.7e-06 55.5 120 34.2
Gorai.004G260200 Gossypium raimondii HOM05D000395 ORTHO05D000088 3.7e-06 55.5 108 30.6
FvH4_1g14660 Fragaria vesca HOM05D000395 ORTHO05D000088 4.9e-06 55.1 90 34.4
Gohir.A08G223600 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.9e-06 55.1 108 30.6
Lj6C562T8 Lonicera japonica HOM05D000823 ORTHO05D000088 4.9e-06 55.1 103 31.1
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 4.9e-06 55.1 96 33.3
Glyma.20G108000 Glycine max HOM05D000395 ORTHO05D000088 6.4e-06 54.7 80 36.2
PSO675G3266 Papaver somniferum HOM05D000395 ORTHO05D000088 8.3e-06 54.3 132 28.0
Psat6g099880 Pisum sativum HOM05D000395 ORTHO05D000088 8.3e-06 54.3 111 33.3


User provided reference genes

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