Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P459T0 Lonicera japonica HOM05D019427 ORTHO05D029987 2.3e-95 352.1 162 100.0
Lj1C608G3 Lonicera japonica HOM05D019427 ORTHO05D029987 6.5e-45 184.5 142 60.6
Lj3P411T3 Lonicera japonica HOM05D019427 ORTHO05D029987 4.5e-14 82.0 79 45.6
Lj1g0013654 Lotus japonicus HOM05D000155 ORTHO05D000022 1.7e-13 80.1 155 29.0
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-13 79.7 153 29.4
Atru.chr12.1755 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-13 79.3 156 30.1
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-13 79.3 155 28.4
AUR62041309 Chenopodium quinoa HOM05D000003 ORTHO05D000007 2.9e-13 79.3 150 28.7
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-13 78.6 155 28.4
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.5e-13 78.2 161 30.4
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-12 77.4 153 28.8
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-12 77.4 154 26.6
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-12 76.6 155 29.7
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 2.5e-12 76.3 48 66.7
Lj2P291T19 Lonicera japonica HOM05D019427 ORTHO05D000022 2.5e-12 76.3 54 57.4
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-12 75.5 155 25.8
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.2e-12 75.5 165 32.1
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 5.5e-12 75.1 153 28.1
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 9.5e-12 74.3 151 27.8
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 1.2e-11 73.9 145 31.7
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 1.2e-11 73.9 153 27.5
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-11 73.6 154 24.7
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-11 73.6 182 25.3
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 2.1e-11 73.2 154 27.3
QL07p021184 Quercus lobata HOM05D000003 ORTHO05D000022 3.6e-11 72.4 161 26.1
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 3.6e-11 72.4 156 27.6
RcHm_v2.0_Chr2g0132921 Rosa chinensis HOM05D000003 ORTHO05D000022 6.1e-11 71.6 157 28.7
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 8.0e-11 71.2 154 24.0
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.0e-11 71.2 155 25.2
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-10 70.9 167 26.9
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.0e-10 69.3 155 27.7
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 161 25.5
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 155 25.2
Prupe.5G085900 Prunus persica HOM05D000003 ORTHO05D000022 6.8e-10 68.2 153 26.1
Lj8P317T12 Lonicera japonica HOM05D019427 ORTHO05D000022 8.8e-10 67.8 107 32.7
Atru.chr10.394 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-09 65.9 156 29.5
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-09 64.7 159 27.0
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 154 24.0
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-08 62.8 161 27.3
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-08 62.8 157 27.4
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 6.3e-08 61.6 165 26.1
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-08 61.2 177 26.0
AUR62005088 Chenopodium quinoa HOM05D000157 ORTHO05D020420 8.3e-08 61.2 152 26.3
LjContig00408g0000741 Lotus japonicus HOM05D000003 ORTHO05D001390 8.3e-08 61.2 160 26.2
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-07 60.5 155 25.2
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 1.4e-07 60.5 155 25.2
Lj3P339T4 Lonicera japonica HOM05D019427 ORTHO05D029987 1.8e-07 60.1 62 46.8
Atru.chr4.1146 Acer truncatum HOM05D000003 ORTHO05D000022 3.1e-07 59.3 155 27.7
Nitab4.5_0004525g0080 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.1e-07 59.3 100 37.0
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.1e-07 58.9 178 27.0
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 178 25.8
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 167 25.1
Atru.chr11.1243 Acer truncatum HOM05D000003 ORTHO05D000022 9.2e-07 57.8 128 28.1
MBI18_g13990_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.2e-07 57.8 113 31.0
Psat7g156400 Pisum sativum HOM05D000003 ORTHO05D017882 9.2e-07 57.8 153 27.5
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 57.0 158 27.8
CANSAT64G2500 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.0 159 24.5
Peaxi162Scf00558g00311 Petunia axillaris HOM05D000155 ORTHO05D000022 1.6e-06 57.0 103 27.2
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 1.6e-06 57.0 158 25.3
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.6e-06 57.0 172 27.3
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.0e-06 56.6 165 24.8
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 2.0e-06 56.6 145 24.1
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 2.0e-06 56.6 145 24.1
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-06 56.2 127 28.3
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.2 162 24.7
PSO339G2736 Papaver somniferum HOM05D003407 ORTHO05D001026 2.7e-06 56.2 182 26.4
Atru.chr7.96 Acer truncatum HOM05D000003 ORTHO05D002259 3.5e-06 55.8 176 26.7
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 3.5e-06 55.8 102 30.4
Atru.chr10.950 Acer truncatum HOM05D000003 ORTHO05D002259 4.5e-06 55.5 117 29.9
MBI11_g41203_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.5 166 25.3
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 4.5e-06 55.5 161 23.0
SHI36204 Sapria himalayana HOM05D000003 ORTHO05D000004 4.5e-06 55.5 176 25.0
Nitab4.5_0007388g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 5.9e-06 55.1 51 41.2
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 7.7e-06 54.7 178 21.9
MBI11_g15874_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.7 93 31.2
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.7 178 21.9
MBI18_g06638_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.7 101 28.7


User provided reference genes

Program Settings