Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 2.7e-122 442.2 257 100.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 3.0e-84 315.8 259 67.6
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.6e-64 249.6 251 66.9
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.3e-63 247.3 256 58.2
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 4.9e-63 245.4 258 57.4
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 7.8e-61 238.0 258 56.6
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.1e-59 234.2 211 64.0
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 7.3e-59 231.5 261 58.2
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 1.6e-58 230.3 258 57.8
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 6.9e-57 224.9 267 52.4
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 2.6e-56 223.0 272 53.7
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 4.5e-56 222.2 258 51.9
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 7.6e-56 221.5 258 52.7
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 9.9e-56 221.1 256 51.2
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 8.4e-55 218.0 296 48.3
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 1.8e-52 210.3 257 50.6
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 1.1e-51 207.6 258 52.7
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 2.5e-51 206.5 258 51.9
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 3.3e-51 206.1 257 49.4
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 4.3e-51 205.7 258 58.1
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 5.6e-51 205.3 259 50.6
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 7.4e-51 204.9 198 58.6
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 1.6e-50 203.8 207 55.6
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 1.6e-50 203.8 194 57.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 1.6e-50 203.8 262 50.4
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 2.8e-50 203.0 201 59.7
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 2.8e-50 203.0 201 59.7
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 3.7e-50 202.6 257 50.6
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 4.8e-50 202.2 256 48.4
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 6.2e-50 201.8 257 48.6
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 1.8e-49 200.3 257 49.0
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 2.4e-49 199.9 257 51.4
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 3.1e-49 199.5 253 55.3
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 4.0e-49 199.1 259 54.1
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 9.0e-49 198.0 259 49.0
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 9.0e-49 198.0 254 52.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 9.0e-49 198.0 257 48.2
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.5e-48 197.2 228 53.9
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 2.6e-48 196.4 259 53.7
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 5.8e-48 195.3 210 54.8
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 5.8e-48 195.3 258 50.8
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 5.8e-48 195.3 225 54.2
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.3e-47 194.1 259 48.6
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.3e-47 194.1 270 51.1
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.2e-47 193.4 259 48.3
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.9e-47 193.0 259 48.3
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 4.2e-46 189.1 198 55.6
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 5.5e-46 188.7 209 53.6
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 7.1e-46 188.3 257 51.4
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 2.1e-45 186.8 258 47.3
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.5e-45 186.0 259 46.7
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 4.6e-45 185.7 235 49.8
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.8e-44 183.7 258 50.4
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 1.8e-44 183.7 263 50.2
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 2.3e-44 183.3 268 47.0
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 5.1e-44 182.2 193 56.5
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 6.7e-44 181.8 107 79.4
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 6.7e-44 181.8 109 76.1
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 8.7e-44 181.4 258 50.8
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 4.3e-43 179.1 258 50.4
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 4.3e-43 179.1 211 53.1
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 7.4e-43 178.3 257 50.2
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 9.6e-43 177.9 185 55.7
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 1.3e-42 177.6 224 50.0
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 2.1e-42 176.8 256 45.7
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 2.8e-42 176.4 180 53.9
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 4.8e-42 175.6 207 53.1
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 6.2e-42 175.3 107 78.5
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 6.2e-42 175.3 263 47.5
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.8e-41 173.7 259 47.5
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.8e-41 173.7 101 74.3
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.1e-41 172.9 262 45.0
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 6.9e-41 171.8 103 73.8
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 9.0e-41 171.4 258 46.9
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.5e-40 170.6 261 51.0
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 2.0e-40 170.2 260 50.0
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 4.5e-40 169.1 278 43.9
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 1.3e-39 167.5 173 53.2
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.2e-39 166.8 233 49.8
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 1.1e-38 164.5 273 44.7
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 1.4e-38 164.1 207 49.8
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 9.3e-38 161.4 255 42.4
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 7.9e-37 158.3 210 51.0
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 1.8e-36 157.1 126 61.1
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.9e-35 153.7 225 44.4
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 4.3e-35 152.5 213 46.9
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 5.7e-35 152.1 169 46.7
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 5.7e-35 152.1 196 46.4
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 6.3e-34 148.7 139 56.1
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 1.1e-33 147.9 265 41.1
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 1.4e-33 147.5 211 45.5
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 6.9e-33 145.2 291 40.5
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 9.0e-33 144.8 138 55.1
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 1.2e-32 144.4 138 55.1
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 1.2e-32 144.4 138 55.1
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 4.5e-32 142.5 267 40.8
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 4.5e-32 142.5 267 40.8
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 7.6e-32 141.7 124 57.3
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 7.6e-32 141.7 212 44.3
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 2.2e-31 140.2 204 42.2
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 2.2e-31 140.2 204 43.6
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 4.2e-30 136.0 279 38.0
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 7.2e-30 135.2 264 39.0
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 1.0e-28 131.3 120 59.2
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 5.1e-28 129.0 171 45.0
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 6.3e-26 122.1 100 50.0
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 2.2e-23 113.6 129 47.3
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.9e-22 110.5 119 47.9
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 1.2e-21 107.8 64 78.1
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 4.6e-21 105.9 90 45.6
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 4.6e-21 105.9 301 34.2
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 7.9e-21 105.1 263 35.4
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 1.8e-20 104.0 99 45.5
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 3.0e-20 103.2 143 40.6
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.7e-18 97.4 193 30.6
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 2.4e-17 93.6 58 77.6
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 2.5e-14 83.6 172 39.5
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 7.2e-14 82.0 194 26.8
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 1.4e-12 77.8 165 38.2
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 3.9e-12 76.3 44 72.7
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.7e-10 70.9 67 59.7
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 4.1e-09 66.2 40 70.0
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 7.7e-08 62.0 45 60.0


User provided reference genes

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