Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 3.5e-121 438.7 297 100.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 7.0e-45 185.3 296 54.7
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 7.7e-44 181.8 250 57.2
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 2.2e-43 180.3 295 50.8
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.2e-43 180.3 292 49.7
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 7.2e-42 175.3 306 52.9
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 8.0e-41 171.8 268 51.9
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 8.8e-40 168.3 250 54.0
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 8.3e-38 161.8 245 55.5
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 2.0e-36 157.1 240 55.8
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 3.5e-36 156.4 308 40.6
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 8.5e-35 151.8 295 47.1
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 1.1e-34 151.4 300 50.0
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 1.1e-34 151.4 204 60.3
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 2.5e-34 150.2 249 51.0
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 4.2e-34 149.4 244 54.5
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.4e-34 148.3 225 55.6
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.6e-33 147.5 228 51.3
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.1e-33 147.1 225 56.0
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 2.1e-33 147.1 272 42.3
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 2.7e-33 146.7 291 41.9
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 2.7e-33 146.7 244 44.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 2.7e-33 146.7 90 84.4
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.0e-32 144.8 244 45.1
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 1.0e-32 144.8 318 44.0
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.4e-32 144.4 292 40.4
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.4e-32 144.4 225 55.1
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.4e-32 144.4 248 46.0
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 5.2e-32 142.5 162 56.8
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 5.2e-32 142.5 294 41.8
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.5e-31 141.0 162 56.8
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.5e-31 141.0 239 51.0
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 3.4e-31 139.8 277 41.5
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 4.4e-31 139.4 248 51.6
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 5.7e-31 139.0 225 56.0
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 7.5e-31 138.7 238 52.9
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 9.8e-31 138.3 244 49.6
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 1.7e-30 137.5 244 51.2
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 2.8e-30 136.7 140 62.1
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 4.8e-30 136.0 298 42.3
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 4.8e-30 136.0 88 81.8
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 1.1e-29 134.8 298 41.6
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.8e-29 134.0 225 53.3
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 4.1e-29 132.9 239 46.0
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 4.1e-29 132.9 300 41.7
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 5.4e-29 132.5 233 48.5
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 5.4e-29 132.5 292 53.4
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 7.0e-29 132.1 254 43.3
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 9.1e-29 131.7 239 43.9
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.7e-28 130.2 90 76.7
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 3.5e-28 129.8 329 40.4
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 3.5e-28 129.8 299 45.5
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 4.5e-28 129.4 304 43.4
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 5.9e-28 129.0 238 43.7
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.3e-27 127.9 238 50.4
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 3.8e-27 126.3 242 45.0
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 6.6e-27 125.6 236 41.9
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 1.1e-26 124.8 239 42.7
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 1.5e-26 124.4 229 51.5
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 1.5e-26 124.4 234 46.2
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 4.2e-26 122.9 287 47.4
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 7.2e-26 122.1 229 44.1
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 7.2e-26 122.1 181 55.8
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 9.5e-26 121.7 309 46.6
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 1.2e-25 121.3 90 68.9
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 1.2e-25 121.3 90 68.9
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.2e-25 121.3 299 40.5
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 1.6e-25 120.9 90 68.9
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.6e-25 120.9 90 68.9
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 2.1e-25 120.6 232 42.7
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 2.1e-25 120.6 277 40.4
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 2.1e-25 120.6 277 40.4
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 2.8e-25 120.2 289 37.7
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 2.8e-25 120.2 199 51.3
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 3.6e-25 119.8 289 43.6
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 3.6e-25 119.8 207 52.7
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 3.6e-25 119.8 229 40.6
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 4.7e-25 119.4 94 73.4
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 8.0e-25 118.6 90 70.0
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 8.0e-25 118.6 254 39.4
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 4.0e-24 116.3 91 68.1
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 4.0e-24 116.3 91 68.1
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 4.0e-24 116.3 212 45.3
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 4.0e-24 116.3 319 40.8
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 5.2e-24 115.9 241 43.6
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 6.8e-24 115.5 282 40.8
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 2.6e-23 113.6 312 41.7
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 4.4e-23 112.8 244 41.4
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.2e-22 110.5 242 40.9
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 4.9e-22 109.4 138 50.7
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 8.3e-22 108.6 297 39.7
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.1e-21 108.2 233 40.8
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.4e-21 107.8 253 37.9
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 1.8e-21 107.5 252 40.1
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 3.2e-21 106.7 247 45.7
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 4.1e-21 106.3 295 36.9
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 2.0e-20 104.0 249 37.3
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.5e-18 97.8 243 37.9
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 4.3e-18 96.3 241 41.9
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 1.2e-17 94.7 89 59.6
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 1.0e-16 91.7 295 43.4
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 5.2e-16 89.4 237 39.2
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 6.8e-16 89.0 231 37.7
QL03p068420 Quercus lobata HOM05D004594 ORTHO05D005225 4.1e-13 79.7 263 32.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 5.4e-13 79.3 86 54.7
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 3.9e-11 73.2 88 47.7
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 5.0e-11 72.8 273 32.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 1.9e-10 70.9 156 41.0
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 4.3e-10 69.7 172 36.0
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 7.3e-10 68.9 241 34.9
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 9.5e-10 68.6 175 36.0
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 2.1e-09 67.4 199 35.7
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 6.8e-08 62.4 152 38.8
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 2.6e-07 60.5 78 50.0


User provided reference genes

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