Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 7.5e-95 350.5 177 100.0
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 4.0e-64 248.4 190 71.1
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 1.7e-59 233.0 201 64.2
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 8.1e-57 224.2 143 78.3
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 1.1e-56 223.8 159 73.0
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 3.1e-56 222.2 153 73.9
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.1e-56 222.2 155 75.5
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 1.2e-55 220.3 175 68.6
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 2.6e-55 219.2 157 70.7
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 3.4e-55 218.8 154 74.0
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.4e-55 218.8 154 74.0
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 5.8e-55 218.0 141 75.9
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 5.8e-55 218.0 157 70.7
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 7.6e-55 217.6 154 74.0
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 9.9e-55 217.2 159 69.8
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 1.3e-54 216.9 157 70.1
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 2.2e-54 216.1 157 73.2
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 3.7e-54 215.3 160 71.9
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.1e-53 213.8 142 76.1
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 1.1e-53 213.8 142 78.2
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 1.4e-53 213.4 161 72.0
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 1.4e-53 213.4 157 70.7
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 1.4e-53 213.4 160 71.2
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 1.9e-53 213.0 159 71.1
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 3.2e-53 212.2 157 72.6
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 3.2e-53 212.2 151 73.5
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 4.1e-53 211.8 161 67.7
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 5.4e-53 211.5 157 72.6
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 7.1e-53 211.1 157 72.6
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 9.2e-53 210.7 154 69.5
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 9.2e-53 210.7 157 70.1
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.2e-52 210.3 159 69.2
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 1.6e-52 209.9 161 70.8
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 1.6e-52 209.9 159 69.2
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 2.1e-52 209.5 160 69.4
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.1e-52 209.5 141 75.2
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 2.7e-52 209.1 157 70.7
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 6.0e-52 208.0 143 76.2
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 6.0e-52 208.0 159 67.9
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 6.0e-52 208.0 142 76.1
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 6.0e-52 208.0 128 80.5
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.0e-51 207.2 144 74.3
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-51 206.8 145 73.1
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 1.7e-51 206.5 128 80.5
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 1.7e-51 206.5 160 70.6
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-51 206.1 145 73.1
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-51 206.1 145 73.1
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 3.9e-51 205.3 161 67.1
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-50 203.4 145 71.7
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 2.5e-50 202.6 162 66.7
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.3e-50 202.2 141 72.3
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.3e-50 202.2 147 70.1
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 9.6e-50 200.7 153 66.7
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 1.6e-49 199.9 159 69.2
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.1e-49 199.5 143 71.3
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.8e-49 199.1 209 54.5
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.8e-49 199.1 209 54.5
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.8e-49 199.1 118 83.1
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 4.7e-49 198.4 138 73.9
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.1e-48 197.2 150 68.7
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 1.4e-48 196.8 133 72.2
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 3.1e-48 195.7 117 82.1
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.4e-47 192.2 143 69.2
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 4.4e-47 191.8 120 79.2
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 4.4e-47 191.8 113 85.0
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 4.4e-47 191.8 150 66.7
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 1.3e-46 190.3 158 65.2
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 2.9e-46 189.1 112 82.1
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 4.9e-46 188.3 127 75.6
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.4e-46 187.6 143 68.5
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 1.1e-45 187.2 140 67.9
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.1e-45 187.2 121 76.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-45 186.8 120 77.5
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 1.9e-45 186.4 139 69.8
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.4e-45 186.0 136 70.6
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.2e-45 185.3 143 68.5
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 5.4e-45 184.9 127 74.0
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.2e-44 183.7 151 62.9
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 1.6e-44 183.3 162 61.7
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 6.0e-44 181.4 162 62.3
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 2.3e-43 179.5 109 80.7
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 3.9e-43 178.7 127 73.2
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 5.1e-43 178.3 123 73.2
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 5.1e-43 178.3 129 72.1
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 6.6e-43 177.9 163 60.1
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 8.7e-43 177.6 141 67.4
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 1.1e-42 177.2 131 72.5
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 1.1e-42 177.2 158 60.8
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.5e-42 176.0 140 67.9
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 3.3e-42 175.6 125 68.8
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 5.6e-42 174.9 156 61.5
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 9.6e-42 174.1 156 60.9
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 9.6e-42 174.1 105 82.9
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 9.6e-42 174.1 125 69.6
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 1.3e-41 173.7 155 60.0
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 1.6e-41 173.3 141 63.1
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 1.6e-41 173.3 124 69.4
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.6e-41 173.3 142 66.2
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 2.1e-41 172.9 141 63.1
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 2.1e-41 172.9 141 63.1
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 2.1e-41 172.9 161 62.1
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 2.1e-41 172.9 159 61.6
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 6.2e-41 171.4 144 61.1
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 6.2e-41 171.4 116 75.0
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 2.4e-40 169.5 142 61.3
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 2.4e-40 169.5 137 63.5
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.4e-40 169.5 117 70.9
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 4.0e-40 168.7 108 75.0
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 4.0e-40 168.7 124 66.1
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 6.9e-40 167.9 115 74.8
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 1.2e-39 167.2 139 61.9
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.5e-39 166.8 107 74.8
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-37 160.6 139 64.0
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 4.2e-37 158.7 136 61.0
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 1.3e-35 153.7 126 62.7
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 2.3e-35 152.9 131 64.1
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 5.1e-35 151.8 94 77.7
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.6e-35 151.4 142 60.6
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.5e-34 149.4 169 55.0
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.3e-34 149.1 78 93.6
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 5.6e-34 148.3 79 92.4
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 7.3e-34 147.9 112 66.1
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 6.2e-33 144.8 81 82.7
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.1e-33 144.4 84 83.3
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 9.9e-31 137.5 119 58.8
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 4.9e-30 135.2 78 83.3
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 5.4e-29 131.7 145 55.2
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 1.8e-19 100.1 124 50.0
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 2.2e-14 83.2 117 42.7
Cpa.g.sc3.109 Carica papaya HOM05D005832 ORTHO05D007117 3.2e-13 79.3 81 55.6
FAN01G3091 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.4e-08 63.9 92 44.6
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 1.2e-07 60.8 40 77.5


User provided reference genes

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