Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 5.2e-156 554.3 273 100.0
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 2.4e-84 316.2 251 64.9
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 7.7e-83 311.2 255 62.4
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 3.8e-82 308.9 251 65.3
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 5.0e-82 308.5 253 63.2
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 8.6e-82 307.8 253 63.6
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 8.6e-82 307.8 253 63.6
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 1.1e-81 307.4 234 66.7
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 3.3e-81 305.8 254 63.8
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 9.5e-81 304.3 255 62.4
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 2.1e-80 303.1 255 61.6
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 2.8e-80 302.8 252 63.9
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 3.6e-80 302.4 256 60.9
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 2.3e-79 299.7 256 61.7
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 8.9e-79 297.7 247 64.4
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 2.0e-78 296.6 250 61.2
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 1.7e-77 293.5 233 61.4
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 2.8e-77 292.7 239 62.8
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 4.9e-77 292.0 249 62.7
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 8.3e-77 291.2 247 62.3
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 3.2e-76 289.3 242 62.8
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 4.1e-76 288.9 249 61.8
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 4.1e-76 288.9 262 57.3
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 5.4e-76 288.5 261 57.5
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 5.9e-75 285.0 230 63.9
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 6.6e-74 281.6 251 57.4
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 1.2e-72 277.3 247 59.1
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 3.6e-72 275.8 246 59.8
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.0e-71 274.2 248 56.9
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 1.8e-71 273.5 252 57.5
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 1.8e-71 273.5 255 55.3
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 5.2e-71 271.9 253 56.1
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 5.2e-71 271.9 248 56.0
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 4.4e-70 268.9 255 54.9
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 5.8e-70 268.5 258 56.6
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 7.5e-70 268.1 247 56.3
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 6.4e-69 265.0 238 54.2
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 8.3e-69 264.6 227 61.7
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 4.1e-68 262.3 280 48.6
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 4.1e-68 262.3 232 59.9
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 5.4e-68 261.9 248 54.0
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 5.4e-68 261.9 235 54.5
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 7.0e-68 261.5 259 52.9
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.6e-67 260.4 177 72.9
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 2.0e-67 260.0 251 54.2
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 2.7e-67 259.6 246 53.3
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 2.7e-67 259.6 232 59.1
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 4.6e-67 258.8 230 58.7
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 7.8e-67 258.1 259 51.7
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 1.3e-66 257.3 274 49.3
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 1.3e-66 257.3 247 55.1
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 1.1e-65 254.2 251 51.0
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 1.1e-65 254.2 232 57.3
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 1.5e-65 253.8 232 57.3
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 1.9e-65 253.4 247 52.2
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 2.5e-65 253.1 247 52.6
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 3.3e-65 252.7 246 52.0
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 3.3e-65 252.7 255 51.8
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 1.2e-64 250.8 256 51.2
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 1.2e-64 250.8 232 57.8
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.6e-64 250.4 254 49.6
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 2.1e-64 250.0 250 52.0
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 6.2e-64 248.4 222 54.1
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 8.0e-64 248.1 236 55.5
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 1.1e-63 247.7 229 58.5
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.4e-63 247.3 249 51.8
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 1.4e-63 247.3 249 53.0
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 1.8e-63 246.9 257 49.4
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 1.8e-63 246.9 236 55.5
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 1.8e-63 246.9 236 54.7
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 3.1e-63 246.1 249 51.8
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 4.0e-63 245.7 234 56.4
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 5.2e-63 245.4 236 55.9
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 5.2e-63 245.4 236 53.4
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 6.8e-63 245.0 226 55.8
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 6.8e-63 245.0 236 54.2
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 8.9e-63 244.6 255 48.6
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 4.4e-62 242.3 248 54.8
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 5.8e-62 241.9 248 52.4
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 7.5e-62 241.5 248 55.2
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 9.8e-62 241.1 241 53.9
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 1.3e-61 240.7 234 53.8
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.9e-61 239.6 248 54.4
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 2.9e-61 239.6 251 48.2
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 6.4e-61 238.4 241 54.4
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 3.2e-60 236.1 236 54.2
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 7.1e-60 235.0 248 54.0
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 1.6e-59 233.8 262 46.9
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 2.7e-59 233.0 236 47.9
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 1.7e-58 230.3 236 55.5
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 3.9e-58 229.2 244 48.4
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 2.1e-56 223.4 233 47.2
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 3.6e-56 222.6 160 66.9
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 4.0e-55 219.2 163 66.9
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 4.4e-54 215.7 248 46.8
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 2.4e-52 209.9 250 43.6
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 9.2e-52 208.0 237 46.4
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 2.5e-49 199.9 158 57.0
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 7.3e-49 198.4 240 41.7
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 4.0e-47 192.6 249 45.8
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 2.7e-35 153.3 99 70.7
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 2.0e-30 137.1 98 69.4
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 7.6e-30 135.2 103 66.0
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 4.3e-25 119.4 183 40.4
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 1.2e-22 111.3 180 35.6
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 2.0e-22 110.5 185 35.1
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 5.8e-22 109.0 255 29.8
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 7.6e-22 108.6 183 40.4
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 1.0e-18 98.2 190 32.1
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 2.0e-14 84.0 184 28.8
SHI15006 Sapria himalayana HOM05D005820 ORTHO05D007116 3.0e-10 70.1 179 27.9
Rhsim03G0224400 Rhododendron simsii HOM05D005820 ORTHO05D007116 5.3e-07 59.3 110 40.9


User provided reference genes

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