Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 4.4e-66 254.6 141 100.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 5.7e-37 157.9 140 68.6
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 2.5e-32 142.5 141 65.2
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.1e-31 139.4 93 78.5
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 3.6e-31 138.7 108 73.1
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 1.3e-30 136.7 97 75.3
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 3.0e-30 135.6 140 62.1
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 6.7e-30 134.4 140 61.4
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 8.7e-30 134.0 103 70.9
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 8.7e-30 134.0 130 63.8
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 1.1e-29 133.7 130 61.5
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.1e-29 133.7 99 72.7
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 1.1e-29 133.7 143 60.1
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 1.1e-29 133.7 141 58.2
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 1.5e-29 133.3 131 61.8
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.5e-29 133.3 142 61.3
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 2.5e-29 132.5 140 60.7
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 2.5e-29 132.5 133 63.9
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 2.5e-29 132.5 85 80.0
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 3.3e-29 132.1 121 62.0
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 3.3e-29 132.1 74 87.8
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 4.3e-29 131.7 119 63.9
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 4.3e-29 131.7 73 86.3
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 4.3e-29 131.7 146 61.0
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 7.4e-29 131.0 144 59.0
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 7.4e-29 131.0 124 65.3
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 7.4e-29 131.0 113 66.4
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 9.7e-29 130.6 106 65.1
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 9.7e-29 130.6 106 65.1
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 1.3e-28 130.2 130 61.5
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.6e-28 129.8 99 73.7
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 1.6e-28 129.8 132 59.1
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 1.6e-28 129.8 71 88.7
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 1.6e-28 129.8 141 57.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.2e-28 129.4 133 60.9
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 2.8e-28 129.0 145 58.6
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 3.7e-28 128.6 107 67.3
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 3.7e-28 128.6 79 79.7
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 3.7e-28 128.6 129 60.5
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 6.3e-28 127.9 135 60.7
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 6.3e-28 127.9 135 60.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 6.3e-28 127.9 139 56.1
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 8.2e-28 127.5 122 59.0
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 8.2e-28 127.5 75 84.0
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 8.2e-28 127.5 125 64.0
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 8.2e-28 127.5 106 65.1
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 8.2e-28 127.5 147 58.5
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.8e-27 126.3 144 57.6
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.8e-27 126.3 144 57.6
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 1.8e-27 126.3 106 64.2
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.8e-27 126.3 134 59.0
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.1e-27 125.6 144 56.2
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 4.1e-27 125.2 98 68.4
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 4.1e-27 125.2 143 55.9
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 9.1e-27 124.0 137 59.1
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 9.1e-27 124.0 116 63.8
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 1.2e-26 123.6 81 76.5
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.0e-26 122.9 86 70.9
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 2.0e-26 122.9 140 58.6
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 3.4e-26 122.1 132 57.6
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 3.4e-26 122.1 138 58.7
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.4e-26 122.1 139 54.7
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.5e-26 121.7 139 55.4
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 4.5e-26 121.7 110 62.7
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 5.9e-26 121.3 130 56.9
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 7.7e-26 120.9 138 55.8
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 1.0e-25 120.6 127 59.1
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.0e-25 120.6 94 63.8
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.3e-25 120.2 136 55.9
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 1.3e-25 120.2 100 69.0
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 2.9e-25 119.0 128 57.0
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 3.8e-25 118.6 64 87.5
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 5.0e-25 118.2 67 85.1
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 8.5e-25 117.5 134 54.5
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.1e-24 117.1 154 52.6
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 1.4e-24 116.7 131 58.0
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 1.9e-24 116.3 64 89.1
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 2.5e-24 115.9 138 56.5
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 2.5e-24 115.9 132 55.3
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 5.5e-24 114.8 99 63.6
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 9.4e-24 114.0 117 56.4
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 9.4e-24 114.0 117 56.4
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 9.4e-24 114.0 117 56.4
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 9.4e-24 114.0 155 51.0
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.2e-23 113.6 84 67.9
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 1.2e-23 113.6 138 55.1
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 2.7e-23 112.5 144 51.4
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 3.6e-23 112.1 130 53.8
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 3.6e-23 112.1 130 53.8
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 6.1e-23 111.3 124 54.8
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 3.9e-22 108.6 152 50.7
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 5.1e-22 108.2 147 48.3
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 6.7e-22 107.8 140 52.1
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 6.7e-22 107.8 133 55.6
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 3.7e-20 102.1 130 51.5
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 5.9e-18 94.7 105 50.5
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 1.0e-17 94.0 125 44.8
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.2e-17 92.8 151 46.4
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 6.5e-17 91.3 119 52.1
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 5.5e-16 88.2 123 43.1
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 2.7e-15 85.9 85 47.1
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 6.7e-14 81.3 66 60.6
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 2.6e-13 79.3 136 42.6
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 2.6e-13 79.3 123 47.2
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 4.8e-12 75.1 116 41.4
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 9.1e-11 70.9 142 40.8
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.2e-10 70.5 129 35.7
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 5.0e-09 65.1 124 34.7
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 1.6e-07 60.1 95 41.1
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 6.7e-06 54.7 40 67.5


User provided reference genes

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