Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 2.2e-224 781.9 392 100.0
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 2.6e-204 715.3 391 89.8
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 5.7e-204 714.1 391 91.0
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 1.7e-203 712.6 391 89.5
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.7e-203 712.6 391 89.8
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 2.2e-203 712.2 391 91.0
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 6.3e-203 710.7 391 90.3
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 1.8e-202 709.1 391 89.8
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 5.3e-202 707.6 391 88.7
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 1.2e-201 706.4 391 89.8
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 1.2e-201 706.4 391 88.7
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 2.6e-201 705.3 391 87.2
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 5.9e-201 704.1 391 88.2
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 5.0e-200 701.0 391 88.5
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 6.5e-200 700.7 391 88.7
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 1.5e-199 699.5 391 88.0
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 1.5e-199 699.5 391 87.5
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.5e-199 699.5 391 87.5
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 2.5e-199 698.7 391 89.0
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 5.5e-199 697.6 391 88.7
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 9.4e-199 696.8 390 86.7
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 1.2e-198 696.4 391 87.7
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.2e-198 696.4 391 88.0
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 1.2e-198 696.4 391 88.0
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 1.6e-198 696.0 391 86.4
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.6e-198 696.0 391 87.2
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 1.6e-198 696.0 391 88.0
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 3.6e-198 694.9 391 87.2
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 3.6e-198 694.9 391 87.0
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 4.7e-198 694.5 391 88.7
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 6.1e-198 694.1 383 89.8
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 8.0e-198 693.7 389 87.1
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 1.0e-197 693.3 391 88.5
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.4e-197 693.0 391 87.0
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.8e-197 692.6 391 88.0
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 1.8e-197 692.6 385 87.8
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 1.8e-197 692.6 391 86.4
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 3.0e-197 691.8 412 84.2
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 4.0e-197 691.4 391 86.2
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 5.2e-197 691.0 390 87.2
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 5.2e-197 691.0 391 87.2
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 6.7e-197 690.6 391 86.2
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 6.7e-197 690.6 391 85.9
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 8.8e-197 690.3 391 87.2
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 2.0e-196 689.1 391 85.9
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 2.0e-196 689.1 391 86.4
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 2.6e-196 688.7 391 86.7
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 7.5e-196 687.2 391 85.9
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 9.7e-196 686.8 391 87.7
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.3e-195 686.4 391 85.7
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 4.8e-195 684.5 391 85.4
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 4.8e-195 684.5 391 85.7
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 1.8e-194 682.6 391 86.2
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.4e-194 682.2 391 85.4
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 2.4e-194 682.2 391 86.4
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 3.1e-194 681.8 391 85.4
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 4.1e-194 681.4 391 85.9
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 4.1e-194 681.4 391 86.4
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 5.3e-194 681.0 391 85.4
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 9.1e-194 680.2 391 85.4
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.6e-193 679.5 382 87.2
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.6e-193 679.5 391 84.9
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 2.0e-193 679.1 391 85.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 7.7e-193 677.2 391 84.9
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 1.0e-192 676.8 391 84.9
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.3e-192 676.4 391 84.9
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.2e-192 675.6 391 84.7
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.2e-192 675.6 391 85.2
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 3.8e-192 674.9 391 84.4
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 8.5e-192 673.7 391 84.4
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-191 673.3 391 84.4
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.1e-191 673.3 391 84.4
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.1e-191 673.3 382 86.1
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.9e-191 672.5 391 84.1
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 2.5e-191 672.2 391 84.7
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 2.5e-191 672.2 391 84.7
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.2e-191 671.8 389 84.6
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.2e-191 671.8 391 83.9
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 7.2e-191 670.6 391 84.1
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 7.2e-191 670.6 389 84.6
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 7.2e-191 670.6 391 84.1
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 9.4e-191 670.2 430 78.6
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.2e-190 669.8 391 83.9
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.2e-190 669.8 391 83.9
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.2e-190 669.8 391 83.9
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 3.6e-190 668.3 384 85.9
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 3.6e-190 668.3 391 83.6
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 4.7e-190 667.9 391 84.4
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 8.0e-190 667.2 417 80.6
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 1.4e-189 666.4 391 83.6
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 1.4e-189 666.4 391 83.6
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.2e-188 663.3 366 88.5
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.2e-188 663.3 366 88.5
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.5e-188 662.9 383 86.4
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.4e-188 661.8 383 86.4
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 5.7e-188 661.0 391 82.6
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.3e-187 659.8 372 87.4
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.2e-187 659.1 391 82.1
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 2.2e-187 659.1 391 81.1
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 4.8e-187 657.9 391 84.1
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 4.8e-187 657.9 391 82.4
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 2.9e-184 648.7 439 75.2
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 8.5e-184 647.1 390 82.1
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 3.1e-178 628.6 381 81.4
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 1.3e-176 623.2 391 79.0
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 3.4e-172 608.6 391 78.3
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.0e-168 597.0 390 76.7
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 6.6e-168 594.3 392 74.7
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.5e-167 593.2 415 74.7
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.5e-167 592.4 391 77.7
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 3.3e-167 592.0 459 68.4
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 5.6e-167 591.3 332 88.0
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 3.6e-166 588.6 392 75.5
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 8.0e-166 587.4 390 76.9
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 3.1e-165 585.5 391 75.2
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 4.0e-165 585.1 391 75.7
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 1.7e-163 579.7 395 73.4
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 3.2e-162 575.5 358 80.7
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 1.8e-157 559.7 392 74.7
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 3.8e-139 498.8 330 76.4
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 4.2e-138 495.4 405 59.8
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.9e-136 488.8 515 55.0
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.4e-125 453.8 265 84.5
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 4.0e-125 452.2 381 59.6
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 5.1e-120 435.3 369 59.9
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.1e-111 407.5 259 77.2
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.6e-105 387.1 393 52.2
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 3.6e-105 386.0 333 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 5.7e-95 352.1 388 51.3
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 4.8e-86 322.4 188 83.0
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 6.5e-83 312.0 173 90.2
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 1.3e-78 297.7 387 42.9
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 6.3e-78 295.4 188 80.9
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 7.2e-66 255.4 236 59.3
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 7.8e-60 235.3 358 40.2
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 2.7e-44 183.7 387 34.1
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.5e-44 183.3 117 78.6
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 7.8e-44 182.2 116 70.7
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 4.9e-30 136.3 72 87.5
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 1.1e-29 135.2 69 91.3
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 7.1e-29 132.5 137 52.6
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 7.8e-28 129.0 81 82.7
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 1.7e-22 111.3 96 63.5
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 1.1e-21 108.6 76 71.1
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 4.2e-21 106.7 66 86.4
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 5.3e-16 89.7 296 27.7
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 1.5e-15 88.2 59 78.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 7.6e-15 85.9 61 68.9
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.1e-10 72.0 50 70.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 6.9e-08 62.8 48 60.4
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 6.9e-08 62.8 48 60.4
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 6.4e-06 56.2 157 28.0


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