Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 2.6e-158 562.0 279 100.0
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 4.8e-112 408.3 288 75.3
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 7.6e-110 401.0 291 72.9
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 7.6e-110 401.0 291 73.2
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 7.6e-110 401.0 290 72.4
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 4.9e-109 398.3 290 70.0
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 2.7e-107 392.5 291 71.5
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 5.1e-106 388.3 290 70.3
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 5.1e-106 388.3 287 70.0
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 8.7e-106 387.5 261 77.0
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 1.1e-105 387.1 287 69.7
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 1.1e-105 387.1 290 70.0
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 4.3e-105 385.2 291 70.4
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 1.8e-103 379.8 291 67.7
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 4.0e-103 378.6 290 67.6
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 5.3e-103 378.3 290 67.9
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 6.9e-103 377.9 290 69.7
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 2.0e-102 376.3 291 69.4
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 2.0e-102 376.3 290 69.0
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 4.5e-102 375.2 289 66.8
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 5.8e-102 374.8 288 69.1
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 2.2e-101 372.9 290 67.9
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 2.2e-101 372.9 290 68.3
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 2.9e-101 372.5 290 66.2
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 3.8e-101 372.1 290 68.6
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 3.8e-101 372.1 290 66.2
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 6.4e-101 371.3 290 67.9
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 8.4e-101 370.9 287 67.2
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 1.1e-100 370.5 290 65.5
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 3.2e-100 369.0 243 77.4
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 3.2e-100 369.0 288 66.3
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 7.1e-100 367.9 290 65.2
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 9.3e-100 367.5 292 66.8
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 1.2e-99 367.1 293 65.9
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 1.6e-99 366.7 290 65.9
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.1e-99 366.3 290 64.5
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 2.1e-99 366.3 288 63.5
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 2.1e-99 366.3 288 68.8
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 6.0e-99 364.8 290 64.8
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 7.9e-99 364.4 288 64.9
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 1.3e-98 363.6 289 65.4
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 1.3e-98 363.6 290 65.2
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 1.8e-98 363.2 290 66.6
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 2.3e-98 362.8 289 64.7
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 2.3e-98 362.8 289 67.8
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 2.3e-98 362.8 298 66.4
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 3.0e-98 362.5 287 65.9
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 3.0e-98 362.5 290 65.9
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 3.0e-98 362.5 290 65.9
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 5.1e-98 361.7 289 65.1
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 5.1e-98 361.7 289 65.1
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 6.7e-98 361.3 289 65.1
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 6.7e-98 361.3 290 63.8
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 1.5e-97 360.1 289 65.4
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 1.9e-97 359.8 290 67.9
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 2.5e-97 359.4 287 65.5
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 2.5e-97 359.4 287 65.5
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 3.3e-97 359.0 290 65.5
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 4.3e-97 358.6 290 66.9
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 4.3e-97 358.6 289 64.7
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 5.6e-97 358.2 290 66.2
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 7.4e-97 357.8 289 63.7
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 9.6e-97 357.5 289 64.0
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 1.3e-96 357.1 289 64.4
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 1.3e-96 357.1 292 65.8
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 2.1e-96 356.3 289 64.4
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 2.8e-96 355.9 289 64.4
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 2.8e-96 355.9 290 69.7
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 4.8e-96 355.1 290 68.3
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 4.8e-96 355.1 291 67.0
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 1.4e-95 353.6 290 65.5
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 6.9e-95 351.3 289 63.0
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 6.9e-95 351.3 290 65.2
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 6.9e-95 351.3 287 64.8
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 3.4e-94 349.0 273 66.7
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 1.3e-93 347.1 289 65.4
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 6.5e-93 344.7 321 58.6
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.1e-92 344.0 288 64.2
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 7.1e-92 341.3 290 61.4
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 2.7e-91 339.3 290 64.5
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 7.9e-91 337.8 290 61.0
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 2.3e-90 336.3 289 61.2
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 2.3e-90 336.3 291 62.5
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.9e-89 333.2 278 64.4
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 1.9e-89 333.2 291 61.2
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 1.4e-87 327.0 275 62.9
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 6.9e-87 324.7 295 61.4
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 2.0e-86 323.2 246 69.5
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 3.4e-86 322.4 271 63.1
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 7.9e-83 311.2 289 57.4
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 2.3e-82 309.7 274 59.5
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 5.7e-81 305.1 290 54.8
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 1.4e-79 300.4 306 53.3
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 1.4e-76 290.4 287 55.4
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 1.6e-75 287.0 196 74.0
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 8.8e-74 281.2 196 74.0
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 4.2e-68 262.3 276 55.1
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 7.9e-67 258.1 277 53.8
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 5.7e-65 251.9 245 55.9
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 6.3e-64 248.4 290 46.2
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 5.9e-62 241.9 292 47.6
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 1.1e-60 237.7 292 46.2
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 6.1e-59 231.9 287 48.1
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 1.8e-55 220.3 289 45.3
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 8.5e-53 211.5 195 59.0
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 1.0e-50 204.5 155 68.4
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 6.8e-50 201.8 310 41.6
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 1.6e-46 190.7 153 63.4
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 2.9e-45 186.4 110 80.9
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 4.2e-44 182.6 130 72.3
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 4.7e-43 179.1 109 78.0
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 1.9e-36 157.1 95 77.9
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 1.0e-34 151.4 168 53.0
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 5.2e-34 149.1 334 33.2
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 3.7e-32 142.9 109 69.7
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 2.7e-30 136.7 333 32.4
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 9.5e-28 128.3 73 83.6
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 1.8e-26 124.0 181 45.9
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 1.9e-15 87.4 65 67.7
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 1.3e-13 81.3 78 47.4
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 1.2e-11 74.7 45 71.1
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 8.9e-10 68.6 85 49.4
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.6e-09 67.0 47 68.1


User provided reference genes

Program Settings