Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.3e-250 867.8 422 100.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.2e-222 775.4 435 86.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.9e-221 772.3 433 86.1
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.5e-221 771.9 428 87.4
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.2e-221 771.5 434 86.6
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.6e-220 769.2 435 84.8
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 8.0e-220 766.9 432 85.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.2e-218 763.1 435 83.9
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.0e-218 762.3 435 84.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.6e-218 761.9 436 83.9
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.6e-218 761.9 435 83.9
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 5.7e-218 760.8 436 83.9
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.7e-217 759.2 432 84.7
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.8e-217 758.4 434 84.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.8e-217 758.4 434 84.3
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.7e-217 758.1 431 83.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.2e-217 756.9 438 83.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.1e-216 756.5 439 83.4
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.4e-216 756.1 462 80.5
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.8e-216 755.7 433 85.2
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.8e-216 755.7 434 84.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.8e-216 755.7 439 83.8
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.4e-216 755.4 435 83.7
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.1e-216 755.0 434 85.0
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.1e-216 755.0 432 84.3
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 4.1e-216 754.6 424 84.7
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 4.1e-216 754.6 435 84.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 7.0e-216 753.8 435 83.9
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.6e-215 752.7 426 85.7
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.6e-215 752.7 440 83.4
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 2.0e-215 752.3 438 82.9
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.0e-215 752.3 432 83.1
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.2e-214 748.8 431 83.1
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.8e-214 748.0 441 81.9
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.8e-214 748.0 437 82.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 3.8e-214 748.0 436 82.1
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 5.0e-214 747.7 444 81.1
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 6.5e-214 747.3 434 82.7
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 8.5e-214 746.9 439 82.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.9e-213 745.7 442 82.4
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.2e-213 745.0 433 83.1
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 5.5e-213 744.2 442 81.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 9.4e-213 743.4 439 81.1
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-212 743.0 426 85.4
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.2e-212 743.0 424 84.2
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.1e-212 742.3 432 81.9
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.7e-212 741.9 425 84.5
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.7e-212 741.9 443 81.0
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 4.7e-212 741.1 440 81.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 4.7e-212 741.1 428 83.2
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 2.3e-211 738.8 428 82.7
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 3.0e-211 738.4 434 81.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 6.8e-211 737.3 432 81.9
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.2e-210 736.5 438 82.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.0e-210 735.7 431 79.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.6e-210 735.3 427 82.0
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 3.4e-210 734.9 415 84.8
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.3e-209 733.0 446 79.4
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.3e-209 733.0 452 80.1
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 3.1e-208 728.4 434 80.0
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 3.1e-208 728.4 434 80.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 4.1e-208 728.0 427 81.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 5.4e-208 727.6 447 78.3
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.6e-207 726.1 427 80.8
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 4.5e-207 724.5 446 78.5
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 5.9e-207 724.2 427 80.6
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.9e-207 724.2 447 78.1
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.9e-207 724.2 427 80.6
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.3e-206 723.0 447 78.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.1e-205 719.9 423 81.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.2e-204 716.5 452 76.1
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 5.2e-203 711.1 418 80.1
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 7.5e-202 707.2 449 76.6
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 8.3e-201 703.7 442 76.0
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.1e-200 701.4 440 76.8
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.3e-198 695.7 401 84.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 5.0e-198 694.5 422 77.0
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.1e-197 693.3 432 76.2
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.1e-197 693.3 497 72.0
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 4.3e-197 691.4 401 82.8
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 2.8e-196 688.7 430 77.7
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 4.4e-194 681.4 423 78.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.9e-193 678.7 430 74.7
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.7e-193 678.3 474 73.6
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.7e-193 678.3 453 76.2
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 4.9e-193 677.9 414 78.7
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 4.1e-192 674.9 427 74.7
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.1e-188 662.5 418 74.4
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.8e-188 662.1 382 84.6
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.6e-186 655.6 468 71.2
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.9e-185 652.1 431 74.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.2e-180 636.7 529 63.9
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.2e-178 630.2 373 81.8
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 7.5e-178 627.5 373 81.0
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.3e-174 616.7 387 77.8
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.7e-174 616.3 421 69.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 9.9e-170 600.5 384 76.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.2e-167 593.6 357 81.0
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.9e-160 569.7 424 64.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.2e-159 567.0 425 64.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.2e-154 550.4 377 74.0
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.9e-153 545.0 494 60.7
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 8.7e-142 507.7 280 87.5
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.1e-141 507.3 272 87.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.1e-139 500.7 271 87.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.1e-131 472.6 416 59.9
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 3.6e-127 459.1 374 60.2
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 7.4e-117 424.9 230 89.6
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.7e-58 230.3 182 65.4
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 4.4e-53 213.0 147 70.7
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.5e-48 198.0 147 65.3
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.5e-45 188.0 99 87.9
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.4e-27 128.3 79 73.4
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 7.1e-19 99.4 57 80.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.9e-17 93.6 55 80.0
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 2.5e-16 90.9 49 87.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.5e-12 76.3 42 83.3
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.5e-11 74.3 49 71.4
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.2e-10 72.0 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.3e-07 62.0 40 75.0


User provided reference genes

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