Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 0.0e+00 1428.3 706 100.0
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.8e-304 1048.9 711 75.8
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.8e-301 1038.9 717 73.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.3e-299 1032.7 711 74.0
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.1e-297 1025.4 712 74.4
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.0e-296 1023.1 711 73.3
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.5e-295 1018.5 712 72.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.4e-293 1012.7 712 72.8
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.6e-289 999.2 707 72.3
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.9e-283 978.4 645 76.0
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.6e-231 805.8 714 59.4
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 5.8e-231 804.7 714 60.2
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.1e-228 796.2 712 59.4
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 9.5e-226 787.3 713 59.2
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.3e-224 782.7 650 61.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 4.4e-223 778.5 709 58.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.3e-219 766.1 711 57.4
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.3e-218 761.1 714 56.6
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.1e-216 757.3 713 56.8
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.8e-216 756.5 668 58.7
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 2.0e-215 753.1 708 56.2
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 9.9e-215 750.7 644 59.0
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-214 750.4 708 55.9
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.7e-214 750.0 708 56.1
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.7e-214 750.0 707 56.9
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-213 747.3 708 56.2
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.9e-213 746.5 710 56.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.9e-213 746.5 703 57.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 6.6e-211 738.0 698 56.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.3e-210 735.3 716 55.0
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 3.6e-209 732.3 614 60.6
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.4e-208 729.6 711 55.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 3.1e-208 729.2 666 57.5
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 3.8e-206 722.2 791 50.9
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.3e-203 713.8 714 54.1
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 3.3e-202 709.1 635 57.6
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.1e-200 704.1 672 54.8
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.4e-200 703.7 710 53.1
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.9e-197 693.3 714 53.5
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.7e-196 689.5 716 53.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 3.3e-194 682.6 734 51.6
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 6.2e-193 678.3 644 54.2
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.1e-192 676.0 716 52.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.0e-190 671.0 620 57.3
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.3e-190 670.6 714 52.1
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 6.5e-190 668.3 616 56.5
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 4.6e-188 662.1 650 53.7
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.5e-186 657.1 661 52.3
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.9e-186 656.8 718 51.3
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.6e-185 653.7 661 52.3
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.8e-185 652.9 681 53.7
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 3.7e-185 652.5 649 53.5
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 4.8e-185 652.1 707 49.2
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.0e-182 642.1 621 54.8
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 8.4e-182 641.3 712 51.1
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.4e-181 640.6 709 50.9
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 9.3e-181 637.9 632 54.1
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.1e-180 636.7 715 49.9
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.3e-179 634.0 729 49.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.7e-179 631.3 658 50.8
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 9.7e-178 627.9 631 52.6
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.3e-177 627.5 714 50.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.3e-177 627.5 714 50.6
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.2e-177 626.7 715 50.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 2.8e-177 626.3 715 49.9
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 6.3e-177 625.2 682 49.9
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 5.3e-176 622.1 715 50.1
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 9.0e-176 621.3 715 50.1
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.5e-175 620.5 645 51.2
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.7e-174 617.1 547 58.3
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.2e-174 616.7 716 49.7
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 6.5e-174 615.1 640 51.4
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 3.0e-171 606.3 737 48.4
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.0e-171 606.3 645 49.6
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 3.3e-170 602.8 726 48.2
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.4e-167 592.8 659 49.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 9.7e-162 574.7 658 46.8
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.0e-159 567.0 708 46.8
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 5.9e-159 565.5 490 60.4
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.0e-158 562.4 728 45.9
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.5e-158 561.6 529 54.3
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.5e-157 558.9 480 62.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.8e-155 553.9 721 44.1
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.5e-154 550.8 502 56.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 8.5e-150 535.0 602 49.8
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.6e-148 530.8 698 48.0
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 3.7e-145 519.6 349 75.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.1e-144 518.1 602 49.2
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 4.0e-139 499.6 493 52.1
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.5e-138 497.7 529 50.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 8.3e-129 465.3 324 71.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.0e-127 460.7 379 60.2
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 6.6e-126 455.7 334 69.8
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.6e-124 451.1 311 73.0
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.1e-117 428.3 645 39.4
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.4e-106 390.2 406 51.0
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 6.6e-102 375.9 657 36.2
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.0e-94 352.1 307 57.7
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 2.1e-92 344.4 340 56.2
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 8.1e-92 342.4 697 34.3
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.8e-91 341.3 342 55.0
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 2.7e-87 327.4 373 46.9
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.5e-82 311.6 375 46.7
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.5e-77 295.0 609 33.0
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 7.4e-77 292.7 313 48.6
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.8e-75 288.1 637 33.4
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.3e-65 255.4 399 38.6
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 2.6e-58 231.1 560 28.9
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.8e-51 208.4 328 37.8
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 2.9e-49 201.1 146 65.8
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 3.7e-44 184.1 187 58.3
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.0e-42 178.3 253 41.1
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.7e-39 167.9 212 43.9
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 9.7e-37 159.5 123 60.2
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.8e-35 155.2 120 60.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-34 150.6 247 40.1
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.4e-27 129.0 191 38.7
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.6e-26 125.6 144 43.1
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 2.9e-25 121.3 169 39.1
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 8.0e-23 113.2 135 51.1
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.0e-21 108.6 163 39.9
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 7.0e-19 100.1 77 63.6
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.9e-18 97.1 302 30.5
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.3e-16 90.9 154 35.7
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.6e-16 90.5 81 56.8
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.9e-12 78.2 118 40.7
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 2.4e-11 75.1 319 24.1
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.7e-09 68.9 210 27.6
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 6.6e-09 67.0 72 45.8


User provided reference genes

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