Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0018232 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-142 509.6 256 100.0
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-65 253.8 261 60.5
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 1.0e-60 237.7 259 55.6
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 9.5e-59 231.1 264 53.0
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 9.0e-41 171.4 268 44.0
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 1.4e-33 147.5 268 39.2
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.3e-31 141.0 264 38.3
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 2.1e-29 133.7 261 39.1
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 6.2e-26 122.1 264 34.5
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 8.2e-26 121.7 267 36.0
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 3.1e-25 119.8 270 35.9
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 6.9e-25 118.6 267 37.5
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 6.9e-25 118.6 259 33.6
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 9.0e-25 118.2 265 33.2
Lj3g0017405 Lotus japonicus HOM05D000051 ORTHO05D000015 2.0e-24 117.1 261 33.3
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-24 117.1 271 36.2
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 2.6e-24 116.7 262 33.2
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 1.0e-23 114.8 265 35.5
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 1.7e-23 114.0 267 35.2
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 2.2e-23 113.6 261 33.3
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 2.2e-23 113.6 264 32.6
Medtr2g082800 Medicago truncatula HOM05D000051 ORTHO05D000015 4.9e-23 112.5 258 36.4
Medtr2g082850 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-22 110.9 262 37.0
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 3.2e-22 109.8 262 32.1
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 3.2e-22 109.8 262 32.4
Medtr1g115245 Medicago truncatula HOM05D000051 ORTHO05D000015 5.5e-22 109.0 166 42.8
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 9.3e-22 108.2 260 34.6
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 1.2e-21 107.8 264 30.7
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 1.6e-21 107.5 264 31.1
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 1.6e-21 107.5 259 32.8
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 2.1e-21 107.1 267 30.0
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 2.7e-21 106.7 264 31.1
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 2.7e-21 106.7 261 34.1
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 4.6e-21 105.9 267 33.3
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 6.0e-21 105.5 281 31.0
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 6.0e-21 105.5 278 32.7
Psat5g251720 Pisum sativum HOM05D000051 ORTHO05D000015 1.3e-20 104.4 193 38.9
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 2.3e-20 103.6 267 34.5
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 3.9e-20 102.8 262 31.3
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 6.7e-20 102.1 270 34.1
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 6.7e-20 102.1 264 34.8
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 2.5e-19 100.1 259 35.1
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 3.3e-19 99.8 263 34.6
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 2.8e-18 96.7 272 32.0
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 4.1e-17 92.8 263 33.8
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 6.9e-17 92.0 207 35.3
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 1.5e-16 90.9 257 33.5
Medtr2g082780 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-16 90.5 117 42.7
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 2.6e-16 90.1 256 33.2
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 2.6e-16 90.1 263 35.0
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.5e-16 89.4 272 30.9
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.4e-14 84.3 260 32.7
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 1.9e-14 84.0 276 31.2
PSO832G3262 Papaver somniferum HOM05D000051 ORTHO05D000015 2.5e-14 83.6 264 31.8
Medtr5g063450 Medicago truncatula HOM05D056080 ORTHO05D048823 3.2e-14 83.2 193 36.8
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.2e-14 82.8 227 35.2
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 9.4e-14 81.6 252 28.6
PSO832G4603 Papaver somniferum HOM05D000051 ORTHO05D000015 1.6e-13 80.9 267 27.3
Psat3g099840 Pisum sativum HOM05D039137 ORTHO05D030175 1.0e-12 78.2 181 29.8
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 3.9e-12 76.3 278 29.5
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 5.1e-12 75.9 268 28.4
Psat3g100000 Pisum sativum HOM05D039137 ORTHO05D030175 2.0e-11 73.9 203 27.6
Lj7A357T28 Lonicera japonica HOM05D000051 ORTHO05D000015 2.5e-11 73.6 148 32.4
PSO832G3437 Papaver somniferum HOM05D000051 ORTHO05D000015 7.4e-11 72.0 255 30.2
Medtr8g006910 Medicago truncatula HOM05D000051 ORTHO05D000015 9.7e-11 71.6 270 31.1
RcHm_v2.0_Chr5g0069781 Rosa chinensis HOM05D000051 ORTHO05D000015 1.3e-10 71.2 257 29.2
Thecc.07G054400 Theobroma cacao HOM05D000051 ORTHO05D013057 2.2e-10 70.5 260 29.6
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 4.8e-10 69.3 255 27.5
PSO063G7158 Papaver somniferum HOM05D000051 ORTHO05D000015 6.3e-10 68.9 268 29.1
Lalb_Chr03g0031411 Lupinus albus HOM05D000051 ORTHO05D000015 8.2e-10 68.6 215 31.6
PSO832G4612 Papaver somniferum HOM05D000051 ORTHO05D000015 5.3e-09 65.9 237 29.5
Lj3g0027587 Lotus japonicus HOM05D000051 ORTHO05D000015 9.1e-09 65.1 234 28.6
PSO144G0009 Papaver somniferum HOM05D000051 ORTHO05D000015 2.6e-08 63.5 269 28.6
PSO063G7669 Papaver somniferum HOM05D000051 ORTHO05D000015 5.9e-08 62.4 266 28.9
Medtr2g067210 Medicago truncatula HOM05D000051 ORTHO05D000015 1.0e-07 61.6 208 27.4
PSO573G0034 Papaver somniferum HOM05D000051 ORTHO05D000015 1.0e-07 61.6 256 28.1
PGR042G0007 Punica granatum HOM05D000051 ORTHO05D000015 1.3e-07 61.2 262 27.9
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 2.9e-07 60.1 157 36.3
PSO063G6440 Papaver somniferum HOM05D000051 ORTHO05D000015 8.5e-07 58.5 208 27.4
COL.COLO4_35727 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.1e-06 58.2 255 26.7
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-06 58.2 210 27.1
PSO170G5088 Papaver somniferum HOM05D000051 ORTHO05D000015 2.5e-06 57.0 272 25.4
PSO832G2305 Papaver somniferum HOM05D000051 ORTHO05D000015 4.2e-06 56.2 267 24.3
PSO081G0061 Papaver somniferum HOM05D000051 ORTHO05D000015 7.2e-06 55.5 274 24.8
PGR042G0305 Punica granatum HOM05D000051 ORTHO05D000015 9.4e-06 55.1 267 26.6


User provided reference genes

Program Settings