Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 2.7e-211 738.4 372 100.0
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 1.1e-111 407.5 371 62.8
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 7.0e-103 378.3 371 59.3
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 6.4e-80 302.0 385 50.6
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 2.3e-69 266.9 371 45.8
Lj2g0018232 Lotus japonicus HOM05D000051 ORTHO05D000015 5.8e-65 252.3 261 60.5
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 4.0e-58 229.6 373 42.4
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 3.0e-53 213.4 375 41.3
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 8.7e-53 211.8 382 39.8
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 6.2e-51 205.7 382 38.0
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 4.2e-47 193.0 373 38.3
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 7.1e-47 192.2 377 40.1
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 7.4e-44 182.2 371 39.1
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-43 181.0 381 39.4
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 6.3e-43 179.1 373 35.7
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 1.4e-42 177.9 379 36.1
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 1.8e-42 177.6 398 33.7
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 2.4e-42 177.2 379 34.3
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 6.9e-42 175.6 356 36.8
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 6.9e-42 175.6 375 34.4
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 1.2e-41 174.9 375 34.7
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 1.2e-41 174.9 369 35.2
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-41 174.5 380 37.6
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-41 174.1 375 32.8
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 4.5e-41 172.9 376 33.2
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 1.0e-40 171.8 376 37.8
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-40 171.4 381 36.5
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 1.3e-40 171.4 376 35.1
Lj3g0017405 Lotus japonicus HOM05D000051 ORTHO05D000015 2.2e-40 170.6 375 34.4
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 2.9e-40 170.2 377 39.0
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 2.9e-40 170.2 372 33.9
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 1.1e-39 168.3 368 33.4
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 2.5e-39 167.2 375 34.4
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 3.2e-39 166.8 372 33.9
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 5.5e-39 166.0 371 35.3
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 5.5e-39 166.0 380 35.0
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 7.2e-39 165.6 372 33.6
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 7.2e-39 165.6 368 34.0
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 9.3e-39 165.2 368 36.1
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 1.2e-38 164.9 375 36.8
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 3.6e-38 163.3 371 32.9
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.6e-38 162.9 327 41.3
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 6.1e-38 162.5 376 38.8
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 6.1e-38 162.5 380 32.9
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 7.9e-38 162.2 382 34.6
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 7.9e-38 162.2 382 36.9
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 1.8e-37 161.0 395 33.9
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 4.3e-36 156.4 368 35.6
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 7.4e-36 155.6 383 34.5
Medtr2g082800 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-34 151.4 327 39.1
Medtr2g082850 Medicago truncatula HOM05D000051 ORTHO05D000015 2.0e-33 147.5 289 38.4
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 2.6e-33 147.1 302 35.8
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 3.8e-32 143.3 349 36.7
Lj3g0014741 Lotus japonicus HOM05D000051 ORTHO05D000015 2.6e-28 130.6 376 29.3
Psat5g251720 Pisum sativum HOM05D000051 ORTHO05D000015 3.7e-27 126.7 219 41.1
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 1.8e-26 124.4 398 31.4
Lj3g0027587 Lotus japonicus HOM05D000051 ORTHO05D000015 5.3e-26 122.9 377 28.1
Medtr6g022350 Medicago truncatula HOM05D000051 ORTHO05D000015 5.3e-26 122.9 351 31.1
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 7.7e-25 119.0 377 31.0
Medtr5g007090 Medicago truncatula HOM05D000051 ORTHO05D000015 1.0e-24 118.6 379 30.3
Medtr1g115245 Medicago truncatula HOM05D000051 ORTHO05D000015 3.8e-24 116.7 192 39.1
Medtr2g072710 Medicago truncatula HOM05D000051 ORTHO05D000015 1.0e-21 108.6 175 42.9
Lalb_Chr03g0031411 Lupinus albus HOM05D000051 ORTHO05D000015 1.4e-21 108.2 238 32.8
Medtr2g082780 Medicago truncatula HOM05D000051 ORTHO05D000015 3.0e-21 107.1 138 44.9
Medtr8g006910 Medicago truncatula HOM05D000051 ORTHO05D000015 3.9e-21 106.7 324 31.5
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 1.1e-20 105.1 347 27.4
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 3.3e-20 103.6 238 33.6
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 7.4e-20 102.4 334 27.5
arahy.Tifrunner.gnm1.ann1.H22LZM Arachis hypogaea HOM05D000051 ORTHO05D000015 4.8e-19 99.8 126 54.0
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 8.2e-19 99.0 342 25.7
Psat3g100000 Pisum sativum HOM05D039137 ORTHO05D030175 5.3e-18 96.3 231 32.9
TPR.G29389 Trifolium pratense HOM05D000051 ORTHO05D000015 1.2e-17 95.1 387 30.5
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 2.6e-17 94.0 116 46.6
QL05p074545 Quercus lobata HOM05D000051 ORTHO05D000015 4.5e-17 93.2 362 24.9
Psat3g099840 Pisum sativum HOM05D039137 ORTHO05D030175 5.9e-17 92.8 237 30.8
QL05p074475 Quercus lobata HOM05D000051 ORTHO05D000015 5.9e-17 92.8 365 26.3
TPR.G16814 Trifolium pratense HOM05D000051 ORTHO05D000015 2.2e-16 90.9 238 34.0
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 3.8e-16 90.1 400 26.0
PSO170G5088 Papaver somniferum HOM05D000051 ORTHO05D000015 8.5e-16 89.0 299 28.4
Medtr5g007110 Medicago truncatula HOM05D000051 ORTHO05D000015 4.2e-15 86.7 120 44.2
Cfa016050 Carpinus fangiana HOM05D000051 ORTHO05D000015 9.4e-15 85.5 310 29.7
Medtr7g094050 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-14 84.7 118 42.4
Medtr3g018680 Medicago truncatula HOM05D000051 ORTHO05D000015 2.1e-14 84.3 366 26.8
Medtr2g072650 Medicago truncatula HOM05D000051 ORTHO05D000015 2.7e-14 84.0 248 31.5
PSO063G7669 Papaver somniferum HOM05D000051 ORTHO05D000015 4.7e-14 83.2 379 24.8
TWI38G0777 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 4.7e-14 83.2 375 25.1
Cpa.g.sc1313.2 Carica papaya HOM05D000051 ORTHO05D000015 2.3e-13 80.9 335 27.8
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 4.0e-13 80.1 349 26.4
MD10G1316000 Malus domestica HOM05D000051 ORTHO05D000015 5.2e-13 79.7 370 25.7
Medtr5g007130 Medicago truncatula HOM05D000051 ORTHO05D000015 1.2e-12 78.6 362 26.0
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea HOM05D002329 ORTHO05D000015 2.0e-12 77.8 141 44.7
Duzib213G0754 Durio zibethinus HOM05D000051 ORTHO05D000015 2.0e-12 77.8 323 27.2
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 2.0e-12 77.8 352 25.9
QL01p041783 Quercus lobata HOM05D000051 ORTHO05D000015 2.0e-12 77.8 430 24.0
Medtr3g048290 Medicago truncatula HOM05D000051 ORTHO05D000015 5.7e-12 76.3 302 24.5
Potri.011G024300 Populus trichocarpa HOM05D000051 ORTHO05D000015 5.7e-12 76.3 357 24.4
TWI53G0445 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 5.7e-12 76.3 355 24.5
Cc05_g03790 Coffea canephora HOM05D000051 ORTHO05D000015 2.2e-11 74.3 367 25.1
PSO675G8004 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-11 74.3 361 24.1
Rhsim05G0144000 Rhododendron simsii HOM05D000051 ORTHO05D000015 8.2e-11 72.4 329 22.2
TWI53G0503 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.2e-11 72.4 361 24.1
Cc05_g13440 Coffea canephora HOM05D000051 ORTHO05D000015 1.4e-10 71.6 262 28.2
QL08p012538 Quercus lobata HOM05D000051 ORTHO05D000015 1.8e-10 71.2 357 26.9
PSO081G0061 Papaver somniferum HOM05D000051 ORTHO05D000015 2.4e-10 70.9 291 26.1
Rhsim04G0036800 Rhododendron simsii HOM05D000051 ORTHO05D000015 2.4e-10 70.9 225 25.8
Cpa.g.sc130.40 Carica papaya HOM05D000051 ORTHO05D000015 7.0e-10 69.3 359 20.6
Psat7g161840 Pisum sativum HOM05D000218 ORTHO05D000125 7.0e-10 69.3 291 29.6
Medtr4g080787 Medicago truncatula HOM05D000051 ORTHO05D000015 9.1e-10 68.9 294 24.1
PSO478G2955 Papaver somniferum HOM05D000051 ORTHO05D000015 9.1e-10 68.9 381 23.4
QL01p041884 Quercus lobata HOM05D000051 ORTHO05D000015 9.1e-10 68.9 177 28.2
Aqoxy1G01746 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.6e-09 68.2 361 24.7
Lalb_Chr03g0031401 Lupinus albus HOM05D000051 ORTHO05D000015 1.6e-09 68.2 138 31.9
arahy.Tifrunner.gnm1.ann1.NZKQ1I Arachis hypogaea HOM05D000051 ORTHO05D000015 3.5e-09 67.0 85 50.6
PSO675G8840 Papaver somniferum HOM05D000051 ORTHO05D000015 3.5e-09 67.0 355 23.4
Migut.M00821 Erythranthe guttata HOM05D000051 ORTHO05D000015 4.5e-09 66.6 334 24.3
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 1.0e-08 65.5 272 28.3
Aqoxy6G02477 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.7e-08 64.7 339 22.4
QL05p074490 Quercus lobata HOM05D000051 ORTHO05D000015 2.9e-08 63.9 201 27.4
Lsat_1_v5_gn_9_94060 Lactuca sativa HOM05D000051 ORTHO05D000015 3.8e-08 63.5 282 25.9
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-08 63.2 367 22.1
Cfa000229 Carpinus fangiana HOM05D000051 ORTHO05D000015 5.0e-08 63.2 288 25.7
Medtr4g080773 Medicago truncatula HOM05D000051 ORTHO05D000015 5.0e-08 63.2 287 24.0
PSO339G2099 Papaver somniferum HOM05D000051 ORTHO05D000015 6.5e-08 62.8 348 23.3
PSO017G2530 Papaver somniferum HOM05D000051 ORTHO05D000015 8.5e-08 62.4 320 23.8
PSO675G5020 Papaver somniferum HOM05D000051 ORTHO05D000015 1.5e-07 61.6 292 25.7
PGR042G0007 Punica granatum HOM05D000051 ORTHO05D000015 2.5e-07 60.8 367 22.6
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 5.5e-07 59.7 373 23.1
Eucgr.E04100 Eucalyptus grandis HOM05D000051 ORTHO05D000015 5.5e-07 59.7 220 25.5
QL05p074499 Quercus lobata HOM05D000051 ORTHO05D000015 5.5e-07 59.7 145 27.6
vmacro11765 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 5.5e-07 59.7 233 27.5
QL01p041788 Quercus lobata HOM05D000051 ORTHO05D000015 7.2e-07 59.3 433 23.8
QL01p041888 Quercus lobata HOM05D000051 ORTHO05D000015 9.4e-07 58.9 269 23.0
RhsimUnG0013200 Rhododendron simsii HOM05D000051 ORTHO05D000015 9.4e-07 58.9 334 22.5
vmacro09405 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 9.4e-07 58.9 222 25.2
RcHm_v2.0_Chr5g0028241 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-06 58.5 376 23.1
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-06 58.2 371 22.1
TPR.G22358 Trifolium pratense HOM05D000051 ORTHO05D000015 2.7e-06 57.4 290 24.8
C03p15580 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-06 57.0 345 22.9
PSO675G0318 Papaver somniferum HOM05D000051 ORTHO05D000015 8.0e-06 55.8 172 26.7
QL08p011365 Quercus lobata HOM05D000051 ORTHO05D000015 8.0e-06 55.8 358 25.4


User provided reference genes

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