Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P525T35 Lonicera japonica HOM05D012818 ORTHO05D000022 1.7e-90 335.9 160 100.0
Lj6P651T37 Lonicera japonica HOM05D012818 ORTHO05D000022 8.1e-48 194.1 135 65.9
Lj2P149T21 Lonicera japonica HOM05D012818 ORTHO05D000022 2.1e-40 169.5 113 71.7
Lju682C1T4 Lonicera japonica HOM05D012818 ORTHO05D000022 6.9e-31 137.9 84 76.2
Lj2A480T50 Lonicera japonica HOM05D000151 ORTHO05D000074 7.6e-30 134.4 108 59.3
Lj2C252G1 Lonicera japonica HOM05D012818 ORTHO05D000022 8.1e-24 114.4 83 60.2
Lj3P997T31 Lonicera japonica HOM05D012818 ORTHO05D000022 1.4e-23 113.6 108 47.2
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 1.2e-19 100.5 134 35.8
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 8.7e-18 94.4 118 37.3
Lj5C138G5 Lonicera japonica HOM05D012818 ORTHO05D000022 1.1e-15 87.4 114 41.2
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.8e-15 86.7 142 35.2
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.4e-15 86.3 134 35.8
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.4e-15 86.3 142 33.8
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-15 85.1 123 35.8
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.2e-14 84.0 134 33.6
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-14 83.2 130 33.1
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.6e-14 82.8 142 32.4
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-13 80.9 129 33.3
Lj1P1149T59 Lonicera japonica HOM05D012818 ORTHO05D000022 1.7e-13 80.1 108 34.3
Lj1P712T20 Lonicera japonica HOM05D012818 ORTHO05D000022 2.9e-13 79.3 62 61.3
Lj8C275T19 Lonicera japonica HOM05D016027 ORTHO05D000022 6.5e-13 78.2 134 29.9
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 8.4e-13 77.8 135 31.1
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-12 77.4 127 33.1
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 1.4e-12 77.0 75 42.7
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.4e-12 77.0 129 34.1
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-12 76.3 131 32.1
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 3.2e-12 75.9 139 30.9
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 3.2e-12 75.9 140 30.7
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 5.5e-12 75.1 130 31.5
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-12 75.1 127 32.3
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-12 74.3 130 31.5
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-11 73.9 131 31.3
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.6e-11 73.6 127 32.3
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 1.6e-11 73.6 121 33.1
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 2.1e-11 73.2 130 31.5
vmacro04689 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 3.5e-11 72.4 138 31.2
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 4.6e-11 72.0 132 33.3
Lju170P25T5 Lonicera japonica HOM05D012818 ORTHO05D000022 4.6e-11 72.0 77 45.5
QL04p047149 Quercus lobata HOM05D000003 ORTHO05D000022 7.9e-11 71.2 139 32.4
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-10 70.9 130 30.8
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-10 70.9 128 33.6
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 1.0e-10 70.9 130 32.3
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 1.3e-10 70.5 125 29.6
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.3e-10 70.5 124 32.3
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-10 70.1 143 28.0
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 1.8e-10 70.1 122 30.3
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-10 70.1 134 28.4
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 3.0e-10 69.3 130 29.2
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 3.0e-10 69.3 130 29.2
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 3.0e-10 69.3 135 30.4
Nitab4.5_0007388g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.9e-10 68.9 109 34.9
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 5.1e-10 68.6 120 33.3
Hma1.2p1_0150F.1_g066640 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 8.7e-10 67.8 74 44.6
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 8.7e-10 67.8 130 28.5
Lj8P114T17 Lonicera japonica HOM05D012818 ORTHO05D000022 8.7e-10 67.8 51 60.8
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-09 67.0 133 30.8
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-09 67.0 127 31.5
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.5e-09 67.0 121 32.2
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 1.5e-09 67.0 101 37.6
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-09 66.6 137 29.9
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 7.4e-09 64.7 103 33.0
QL07p034964 Quercus lobata HOM05D000053 ORTHO05D000448 7.4e-09 64.7 122 33.6
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 7.4e-09 64.7 102 30.4
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 9.7e-09 64.3 133 28.6
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 9.7e-09 64.3 126 30.2
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-08 63.9 131 26.7
Atru.chr10.1106 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-08 63.5 126 31.0
Lj8P347T0 Lonicera japonica HOM05D016027 ORTHO05D010957 2.8e-08 62.8 72 37.5
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 3.7e-08 62.4 115 33.0
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 3.7e-08 62.4 124 30.6
Atru.chr2.284 Acer truncatum HOM05D000003 ORTHO05D000022 4.8e-08 62.0 127 27.6
arahy.Tifrunner.gnm1.ann1.I6PHI5 Arachis hypogaea HOM05D000003 ORTHO05D000022 4.8e-08 62.0 131 31.3
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 4.8e-08 62.0 135 30.4
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 8.2e-08 61.2 131 26.7
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-07 60.5 136 30.1
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.4e-07 59.7 117 30.8
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 2.4e-07 59.7 131 29.0
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 2.4e-07 59.7 131 29.0
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-07 59.3 130 28.5
Glyma.13G224100 Glycine max HOM05D000062 ORTHO05D000043 3.1e-07 59.3 133 27.1
Nitab4.5_0000222g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.1e-07 59.3 109 32.1
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 4.1e-07 58.9 135 26.7
Atru.chr8.2517 Acer truncatum HOM05D000003 ORTHO05D000022 4.1e-07 58.9 125 30.4
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 5.3e-07 58.5 103 30.1
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 5.3e-07 58.5 122 30.3
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 6.9e-07 58.2 132 26.5
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 6.9e-07 58.2 95 32.6
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 6.9e-07 58.2 112 31.2
Atru.chr10.2028 Acer truncatum HOM05D000155 ORTHO05D000022 1.2e-06 57.4 123 28.5
Lj1g0006975 Lotus japonicus HOM05D000100 ORTHO05D000052 1.2e-06 57.4 57 45.6
Peaxi162Scf00129g00613 Petunia axillaris HOM05D000003 ORTHO05D026350 1.5e-06 57.0 83 36.1
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 1.5e-06 57.0 130 30.0
QL06p035443 Quercus lobata HOM05D000003 ORTHO05D000022 2.6e-06 56.2 110 34.5
TPR.G27521 Trifolium pratense HOM05D000003 ORTHO05D000022 2.6e-06 56.2 126 28.6
Atru.chr1.1867 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-06 55.8 99 30.3
CANSAT21G1499 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-06 55.8 91 34.1
Lju41C53T2 Lonicera japonica HOM05D012818 ORTHO05D000022 3.4e-06 55.8 26 84.6
RcHm_v2.0_Chr5g0016411 Rosa chinensis HOM05D000003 ORTHO05D000022 3.4e-06 55.8 117 27.4
Hma1.2p1_0028F.1_g017510 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 5.9e-06 55.1 56 46.4
Lj4P841T34 Lonicera japonica HOM05D000003 ORTHO05D000167 5.9e-06 55.1 129 28.7
VMungo0540G1625 Vigna mungo HOM05D000062 ORTHO05D000043 5.9e-06 55.1 130 24.6
Lj4g0002379 Lotus japonicus HOM05D000003 ORTHO05D000022 7.7e-06 54.7 113 29.2


User provided reference genes

Program Settings