Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 2.5e-134 482.6 345 100.0
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 3.0e-84 316.2 356 65.2
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 8.3e-82 308.1 361 67.9
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 4.1e-81 305.8 312 65.1
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.2e-80 304.3 357 69.5
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.0e-79 301.2 361 65.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.7e-79 300.4 356 68.3
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.3e-79 300.1 254 69.3
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.9e-79 299.7 351 65.8
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 5.0e-79 298.9 328 68.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 6.6e-79 298.5 330 71.5
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.1e-78 297.7 351 64.1
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.5e-78 296.6 363 62.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 3.3e-78 296.2 361 69.8
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 3.3e-78 296.2 355 67.6
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.2e-77 294.3 334 70.1
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.2e-77 294.3 356 69.9
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.1e-77 293.5 354 68.6
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 2.1e-77 293.5 337 67.7
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 3.6e-77 292.7 360 64.2
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 3.6e-77 292.7 362 64.4
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 4.7e-77 292.4 356 67.4
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 4.7e-77 292.4 358 67.0
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 6.1e-77 292.0 361 67.9
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.0e-76 291.2 351 65.2
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.0e-76 291.2 357 68.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.4e-76 290.8 359 63.8
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 1.8e-76 290.4 334 68.3
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.2e-76 288.9 244 70.5
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 5.2e-76 288.9 358 65.9
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 6.8e-76 288.5 356 66.6
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.9e-76 288.1 301 64.1
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.2e-75 287.7 353 64.9
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.2e-75 287.7 197 82.7
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.2e-75 287.7 355 65.1
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 3.4e-75 286.2 354 64.4
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 3.4e-75 286.2 166 83.1
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 3.4e-75 286.2 356 64.0
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 4.4e-75 285.8 209 75.6
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 5.7e-75 285.4 340 67.4
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 7.5e-75 285.0 205 79.5
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.8e-75 284.6 356 63.2
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 9.8e-75 284.6 356 64.9
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.3e-74 284.3 337 69.7
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 2.9e-74 283.1 340 61.5
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.9e-74 283.1 356 60.1
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.7e-74 282.7 186 81.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 4.9e-74 282.3 245 67.8
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 4.9e-74 282.3 329 58.1
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.4e-74 282.0 356 64.0
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 6.4e-74 282.0 336 69.6
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 8.3e-74 281.6 355 62.3
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 8.3e-74 281.6 341 68.0
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.4e-73 280.8 197 80.7
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 1.4e-73 280.8 213 74.6
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.8e-73 280.4 165 84.2
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 4.1e-73 279.3 356 62.9
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 7.0e-73 278.5 357 61.1
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.2e-72 277.7 351 65.5
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 2.0e-72 276.9 358 67.6
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 2.0e-72 276.9 376 63.3
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.6e-72 275.8 217 71.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.6e-72 275.8 217 71.9
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 7.8e-72 275.0 361 59.6
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.3e-71 274.2 255 64.3
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.3e-71 273.5 209 75.1
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.3e-71 273.5 209 75.1
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 2.3e-71 273.5 209 75.1
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.9e-71 272.7 202 76.7
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.1e-70 271.2 191 79.1
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.1e-70 271.2 209 74.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 2.5e-70 270.0 199 77.9
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 3.3e-70 269.6 335 61.8
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 4.3e-70 269.2 360 63.3
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 7.3e-70 268.5 330 60.6
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.2e-69 267.7 338 66.0
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 2.1e-69 266.9 209 73.7
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 6.2e-69 265.4 165 79.4
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.2e-69 265.4 166 79.5
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.4e-68 264.2 161 81.4
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 5.2e-68 262.3 255 62.0
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 6.8e-68 261.9 335 61.2
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 2.0e-67 260.4 257 61.9
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.3e-66 257.7 209 71.8
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 3.7e-66 256.1 356 60.4
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.7e-66 256.1 160 78.1
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.9e-65 253.8 186 73.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 9.2e-65 251.5 164 75.0
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.5e-64 249.6 147 82.3
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.2e-61 241.1 165 71.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.4e-60 237.7 165 69.7
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.8e-60 237.3 165 69.7
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.8e-60 237.3 165 69.7
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.8e-60 237.3 165 69.7
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 6.8e-60 235.3 165 69.1
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 6.8e-60 235.3 168 70.2
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 1.7e-58 230.7 212 64.6
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 2.2e-58 230.3 160 70.6
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 4.1e-57 226.1 211 63.5
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 5.4e-57 225.7 165 67.3
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 6.0e-56 222.2 166 66.3
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.8e-53 213.4 164 64.0
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.4e-50 201.8 160 62.5
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 8.4e-50 201.8 160 62.5
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-49 200.7 162 61.7
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.9e-49 200.7 162 61.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.9e-44 182.2 155 73.5
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.1e-38 164.9 151 59.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.1e-33 148.3 165 50.3
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.6e-29 134.4 165 46.7
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.6e-27 127.1 189 47.1
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 4.3e-22 109.8 164 39.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 4.9e-18 96.3 63 74.6
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.9e-17 94.4 136 41.2
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 2.8e-13 80.5 117 40.2
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.6e-11 73.9 95 46.3
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.1e-07 59.7 88 40.9
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 1.1e-06 58.5 106 37.7
Aa31LG1G5230 Aethionema arabicum HOM05D005498 ORTHO05D006719 7.4e-06 55.8 106 36.8
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 7.4e-06 55.8 153 32.0
Sp1g08350 Schrenkiella parvula HOM05D005498 ORTHO05D006719 7.4e-06 55.8 106 34.0
AT1G09760 Arabidopsis thaliana HOM05D005498 ORTHO05D006719 9.7e-06 55.5 106 35.8
C08p13170 Brassica napus HOM05D005498 ORTHO05D006719 9.7e-06 55.5 106 34.9
BolC8t48946H Brassica oleracea HOM05D005498 ORTHO05D006719 9.7e-06 55.5 106 34.9
BraA08t35348Z Brassica rapa HOM05D005498 ORTHO05D006719 9.7e-06 55.5 106 34.9
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 9.7e-06 55.5 106 34.9


User provided reference genes

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