Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P149T21 Lonicera japonica HOM05D012818 ORTHO05D000022 4.9e-58 227.6 119 100.0
Lj2P525T35 Lonicera japonica HOM05D012818 ORTHO05D000022 2.7e-40 168.7 113 71.7
Lj6P651T37 Lonicera japonica HOM05D012818 ORTHO05D000022 1.4e-33 146.4 113 62.8
Lju682C1T4 Lonicera japonica HOM05D012818 ORTHO05D000022 2.2e-26 122.5 81 72.8
Lj2C252G1 Lonicera japonica HOM05D012818 ORTHO05D000022 1.1e-20 103.6 85 56.5
Lj3P997T31 Lonicera japonica HOM05D012818 ORTHO05D000022 1.4e-17 93.2 105 42.9
Lj2A480T50 Lonicera japonica HOM05D000151 ORTHO05D000074 4.6e-16 88.2 91 48.4
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 2.5e-14 82.4 106 33.0
Lj1P1149T59 Lonicera japonica HOM05D012818 ORTHO05D000022 4.1e-12 75.1 106 33.0
QL04p047149 Quercus lobata HOM05D000003 ORTHO05D000022 7.7e-11 70.9 118 35.6
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.2e-10 69.3 98 34.7
Lj1P712T20 Lonicera japonica HOM05D012818 ORTHO05D000022 2.2e-10 69.3 54 57.4
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 5.0e-10 68.2 112 33.9
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.1e-09 67.0 111 35.1
Lju170P25T5 Lonicera japonica HOM05D012818 ORTHO05D000022 1.4e-09 66.6 97 37.1
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.4e-09 66.6 110 34.5
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 5.5e-09 64.7 104 34.6
Lj8P114T17 Lonicera japonica HOM05D012818 ORTHO05D000022 7.2e-09 64.3 44 70.5
Peaxi162Scf00015g00940 Petunia axillaris HOM05D000145 ORTHO05D000115 1.2e-08 63.5 115 31.3
Hma1.2p1_0150F.1_g066640 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.6e-08 63.2 85 35.3
Lj5C138G5 Lonicera japonica HOM05D012818 ORTHO05D000022 1.6e-08 63.2 103 36.9
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-08 63.2 98 31.6
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 2.7e-08 62.4 113 30.1
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.6e-08 62.0 110 31.8
vmacro04689 Vaccinium macrocarpon HOM05D000301 ORTHO05D000303 6.1e-08 61.2 110 34.5
Nitab4.5_0007388g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.9e-08 60.8 91 35.2
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 7.9e-08 60.8 98 30.6
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-07 60.5 99 32.3
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 1.0e-07 60.5 105 31.4
Atru.chr1.1867 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-07 60.1 101 29.7
Nitab4.5_0014215g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.4e-07 60.1 101 31.7
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 1.4e-07 60.1 105 31.4
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 1.8e-07 59.7 101 34.7
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 1.8e-07 59.7 123 31.7
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-07 59.3 105 30.5
Prupe.5G085900 Prunus persica HOM05D000003 ORTHO05D000022 2.3e-07 59.3 101 34.7
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 2.3e-07 59.3 101 34.7
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 2.3e-07 59.3 101 34.7
Solyc06g082170.2 Solanum lycopersicum HOM05D000314 ORTHO05D000189 2.3e-07 59.3 115 33.9
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 2.3e-07 59.3 113 29.2
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 3.9e-07 58.5 106 33.0
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-07 58.2 100 34.0
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 5.1e-07 58.2 106 33.0
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 6.7e-07 57.8 100 31.0
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 8.8e-07 57.4 99 32.3
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 8.8e-07 57.4 99 32.3
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 8.8e-07 57.4 108 29.6
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.1e-06 57.0 96 32.3
QL06p035443 Quercus lobata HOM05D000003 ORTHO05D000022 1.1e-06 57.0 109 33.9
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 1.1e-06 57.0 108 29.6
Nitab4.5_0000222g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.5e-06 56.6 99 32.3
Nitab4.5_0003867g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.5e-06 56.6 105 30.5
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.5e-06 56.6 108 30.6
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-06 56.2 98 30.6
Eucgr.B00585 Eucalyptus grandis HOM05D000003 ORTHO05D000022 2.0e-06 56.2 98 34.7
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 2.0e-06 56.2 99 34.3
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 2.0e-06 56.2 108 31.5
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 2.0e-06 56.2 94 31.9
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 2.6e-06 55.8 100 28.0
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 3.3e-06 55.5 100 29.0
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 3.3e-06 55.5 106 32.1
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 3.3e-06 55.5 106 32.1
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-06 55.1 100 30.0
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 4.4e-06 55.1 52 48.1
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 4.4e-06 55.1 106 30.2
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 4.4e-06 55.1 106 30.2
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-06 54.7 100 28.0
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 5.7e-06 54.7 106 29.2


User provided reference genes

Program Settings